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Lsi05G009990 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G009990
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionbet1-like SNARE 1-1
Genome locationchr05:17455155..17459452
RNA-Seq ExpressionLsi05G009990
SyntenyLsi05G009990
Gene Ontology termsGO:0015031 - protein transport (biological process)
GO:0030173 - integral component of Golgi membrane (cellular component)
InterPro domainsIPR000727 - Target SNARE coiled-coil homology domain
IPR039897 - BET1-like protein
IPR039899 - BET1, SNARE domain


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004151976.1 bet1-like SNARE 1-1 [Cucumis sativus]1.5e-5696.75Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVALFDGIEEGGVRAS SYSSHEIEEHDNE ALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVALFVAIFFIVYYLTR
         PKMFSLVALFV IFFIVYYLTR
Subjt:  SPKMFSLVALFVAIFFIVYYLTR

XP_022146012.1 bet1-like SNARE 1-1 [Momordica charantia]1.8e-5797.56Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRE+RNNRVALFDGIEEGGVRASSS+SSHEIEEHDNE ALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVALFVAIFFIVYYLTR
        SPKMFSLVALFVAIFFIVYYLTR
Subjt:  SPKMFSLVALFVAIFFIVYYLTR

XP_022931255.1 bet1-like SNARE 1-1 [Cucurbita moschata]2.0e-5696.75Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRV+LFDGIEEGGVRASSSYSSHEIEE DNE ALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVALFVAIFFIVYYLTR
        SPKMFSLV LFVAIFFIVYYLTR
Subjt:  SPKMFSLVALFVAIFFIVYYLTR

XP_022963635.1 bet1-like SNARE 1-1 [Cucurbita moschata]9.0e-5797.56Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNE AL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVALFVAIFFIVYYLTR
         PKMFSLVALFVAIFFIVYYLTR
Subjt:  SPKMFSLVALFVAIFFIVYYLTR

XP_038887294.1 bet1-like SNARE 1-1 [Benincasa hispida]8.1e-5898.37Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNE AL+GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVALFVAIFFIVYYLTR
        SPKMFSLVALFVAIFFIVYYLTR
Subjt:  SPKMFSLVALFVAIFFIVYYLTR

TrEMBL top hitse value%identityAlignment
A0A0A0LBA5 t-SNARE coiled-coil homology domain-containing protein7.4e-5796.75Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVALFDGIEEGGVRAS SYSSHEIEEHDNE ALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVALFVAIFFIVYYLTR
         PKMFSLVALFV IFFIVYYLTR
Subjt:  SPKMFSLVALFVAIFFIVYYLTR

A0A6J1CYB1 bet1-like SNARE 1-18.8e-5897.56Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRE+RNNRVALFDGIEEGGVRASSS+SSHEIEEHDNE ALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVALFVAIFFIVYYLTR
        SPKMFSLVALFVAIFFIVYYLTR
Subjt:  SPKMFSLVALFVAIFFIVYYLTR

A0A6J1EYY0 bet1-like SNARE 1-19.7e-5796.75Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRV+LFDGIEEGGVRASSSYSSHEIEE DNE ALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVALFVAIFFIVYYLTR
        SPKMFSLV LFVAIFFIVYYLTR
Subjt:  SPKMFSLVALFVAIFFIVYYLTR

A0A6J1HIJ8 bet1-like SNARE 1-14.4e-5797.56Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNE AL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVALFVAIFFIVYYLTR
         PKMFSLVALFVAIFFIVYYLTR
Subjt:  SPKMFSLVALFVAIFFIVYYLTR

A0A6J1HRZ5 bet1-like SNARE 1-14.4e-5797.56Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNE AL GLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVALFVAIFFIVYYLTR
         PKMFSLVALFVAIFFIVYYLTR
Subjt:  SPKMFSLVALFVAIFFIVYYLTR

SwissProt top hitse value%identityAlignment
O35152 BET1-like protein1.3e-0534Show/hide
Query:  RASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPK--MFSLVALFVAIFFIVYYL
        RA SS +  EI + +N+   + L  +V  LK L  DI+ + E  NR LD M +D  S  G+L+G++ RF TV       +  +  +  + +  FFI+ YL
Subjt:  RASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPK--MFSLVALFVAIFFIVYYL

Q3MHP8 BET1-like protein1.7e-0535.92Show/hide
Query:  RASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSSPKMFSLVA--LFVAIFFIVYY
        RA S  +  EI + +N+   + L  +V  LK L  DI+ + E  NR LD M +D  S  G+L+G++ RF T+    + + K+   VA  L VA F + Y 
Subjt:  RASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSSPKMFSLVA--LFVAIFFIVYY

Query:  LTR
        L+R
Subjt:  LTR

Q5RBX2 BET1-like protein5.8e-0634.95Show/hide
Query:  RASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSSPKMF--SLVALFVAIFFIVYY
        RA S  +  EI + +N+   + L  +V  LK L  DI+++ E  NR LD M +D  S  G+L+G++ RF T+    + + K+     V L VA F + Y+
Subjt:  RASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVF-DPKSSPKMF--SLVALFVAIFFIVYY

Query:  LTR
        L+R
Subjt:  LTR

Q94CG2 Bet1-like SNARE 1-24.7e-3259.52Show/hide
Query:  MNARRELRNNRVALF---DGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD
        MN RRE R +R +LF   DG+EEG +RASSSY+    +E DN+ ALE LQDRV  LKR+TGDI+EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+
Subjt:  MNARRELRNNRVALF---DGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD

Query:  PKSSPKMFSLVALFVAIFFIVYYLTR
         KS+ K   L+A FV +F I+YYL R
Subjt:  PKSSPKMFSLVALFVAIFFIVYYLTR

Q9M2J9 Bet1-like SNARE 1-12.2e-4576.42Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MN RRE R  R +LFDGIEEGG+RA+SSY SHEI EH+NE ALEGLQDRV+LLKRL+GDINEEV++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVALFVAIFFIVYYLTR
        S +M +LVA FV +F ++YYLTR
Subjt:  SPKMFSLVALFVAIFFIVYYLTR

Arabidopsis top hitse value%identityAlignment
AT3G58170.1 BET1P/SFT1P-like protein 14A1.5e-4676.42Show/hide
Query:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS
        MN RRE R  R +LFDGIEEGG+RA+SSY SHEI EH+NE ALEGLQDRV+LLKRL+GDINEEV++HNRMLDRMGNDMDSSRG LSGTMDRFKTVF+ KS
Subjt:  MNARRELRNNRVALFDGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKS

Query:  SPKMFSLVALFVAIFFIVYYLTR
        S +M +LVA FV +F ++YYLTR
Subjt:  SPKMFSLVALFVAIFFIVYYLTR

AT4G14455.1 Target SNARE coiled-coil domain protein3.3e-3359.52Show/hide
Query:  MNARRELRNNRVALF---DGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD
        MN RRE R +R +LF   DG+EEG +RASSSY+    +E DN+ ALE LQDRV  LKR+TGDI+EEVE+HNR+LD++GN MDS+RG++SGT++RFK VF+
Subjt:  MNARRELRNNRVALF---DGIEEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFD

Query:  PKSSPKMFSLVALFVAIFFIVYYLTR
         KS+ K   L+A FV +F I+YYL R
Subjt:  PKSSPKMFSLVALFVAIFFIVYYLTR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTGGATAGCTTCAGCTGCTCCGATAACTGCTTCCGGTACGTTTCTCTTCCACCTCCTTCCTCCTCAATCTCTGTCCAATTCAAATTCCCCTTTCAATTTTGATCTTCG
TGGTTGGATTCTCGATTCTATCTTCCTTTTTTTTCTCGATTCTTCGCCGCTGCATCCTTCAATTCCTCGACAGGGAAGCGTTTTTATAACAGATCGAGAAATCTTTGATT
GCGAATCCAAGAACGTACAGGCCTGGGCGTGGATTCTGTTTCATCCCGAGAGAGTCATGAATGCGAGAAGGGAACTGCGCAACAATAGGGTTGCTCTCTTCGATGGCATT
GAGGAGGGCGGTGTCAGGGCCTCATCTTCCTATTCCTCCCATGAAATCGAGGAGCATGATAATGAAGTAGCATTGGAAGGCTTGCAAGACAGAGTCCTCCTGTTGAAGAG
GTTGACAGGTGACATAAATGAGGAGGTGGAGAGTCATAATCGCATGCTGGATAGGATGGGTAATGATATGGATTCATCAAGAGGAGTGTTGTCGGGCACTATGGATCGAT
TCAAGACGGTATTTGATCCCAAGTCGAGCCCGAAGATGTTCTCACTAGTTGCACTTTTCGTGGCAATTTTCTTCATCGTGTACTATCTCACAAGGTAA
mRNA sequenceShow/hide mRNA sequence
ATGTGGATAGCTTCAGCTGCTCCGATAACTGCTTCCGGTACGTTTCTCTTCCACCTCCTTCCTCCTCAATCTCTGTCCAATTCAAATTCCCCTTTCAATTTTGATCTTCG
TGGTTGGATTCTCGATTCTATCTTCCTTTTTTTTCTCGATTCTTCGCCGCTGCATCCTTCAATTCCTCGACAGGGAAGCGTTTTTATAACAGATCGAGAAATCTTTGATT
GCGAATCCAAGAACGTACAGGCCTGGGCGTGGATTCTGTTTCATCCCGAGAGAGTCATGAATGCGAGAAGGGAACTGCGCAACAATAGGGTTGCTCTCTTCGATGGCATT
GAGGAGGGCGGTGTCAGGGCCTCATCTTCCTATTCCTCCCATGAAATCGAGGAGCATGATAATGAAGTAGCATTGGAAGGCTTGCAAGACAGAGTCCTCCTGTTGAAGAG
GTTGACAGGTGACATAAATGAGGAGGTGGAGAGTCATAATCGCATGCTGGATAGGATGGGTAATGATATGGATTCATCAAGAGGAGTGTTGTCGGGCACTATGGATCGAT
TCAAGACGGTATTTGATCCCAAGTCGAGCCCGAAGATGTTCTCACTAGTTGCACTTTTCGTGGCAATTTTCTTCATCGTGTACTATCTCACAAGGTAATCCTCTCCCATT
TGGATATCGAAAGAACTCGAGCTTTGCCCAGAAGACAATGATCACTATTGCTGCTTAGTTCCATCAGTATTATTACATGTAAGTTTGGCATAGATGTTCTGTTGATGCTT
GTGTGAATATTGTTTCCTTGTACCAAATTAAAGTTGAATGAATTTGAAAACCAAATATCATCTGCTGCTCTCCATTAAGCTGGCTTTGATGGGGAGAGATATATATAATC
AGCAAACCAGTTTGTTACTTGAGAGTTTAATATCTCTGCCTTGCCTATATTGTCTATTTAATTCAAGCCATTTTATTATCGATCTCAAACAAGCTGTGAAGTTCACAACT
GTGTTGGGATGTAATTTCCGAAAAGCTGGAATGTTTTGAAGAAAGTGTAAAGAAAACC
Protein sequenceShow/hide protein sequence
MWIASAAPITASGTFLFHLLPPQSLSNSNSPFNFDLRGWILDSIFLFFLDSSPLHPSIPRQGSVFITDREIFDCESKNVQAWAWILFHPERVMNARRELRNNRVALFDGI
EEGGVRASSSYSSHEIEEHDNEVALEGLQDRVLLLKRLTGDINEEVESHNRMLDRMGNDMDSSRGVLSGTMDRFKTVFDPKSSPKMFSLVALFVAIFFIVYYLTR