; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G010220 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G010220
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionrho-N domain-containing protein 1, chloroplastic-like
Genome locationchr05:17704413..17708147
RNA-Seq ExpressionLsi05G010220
SyntenyLsi05G010220
Gene Ontology termsGO:0006353 - DNA-templated transcription, termination (biological process)
InterPro domainsIPR011112 - Rho termination factor, N-terminal


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0038048.1 rho-N domain-containing protein 1 [Cucumis melo var. makuwa]1.6e-18486.6Show/hide
Query:  MGFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSS
        +GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS GHRRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS
Subjt:  MGFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSS

Query:  KNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKEN
        +NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRSS  G+G S+KD  FNHVKEN
Subjt:  KNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKEN

Query:  GPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQ
        GPYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+SPVPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ
Subjt:  GPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQ

Query:  GETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLL
         +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+KH EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLL
Subjt:  GETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLL

Query:  SDA
        S++
Subjt:  SDA

XP_008447421.1 PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X7 [Cucumis melo]2.1e-18486.82Show/hide
Query:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK
        GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS GHRRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS+
Subjt:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK

Query:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENG
        NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRSS  G+G S+KD  FNHVKENG
Subjt:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENG

Query:  PYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG
        PYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+SPVPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ 
Subjt:  PYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG

Query:  ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLS
        +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+KH EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLLS
Subjt:  ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLS

Query:  DA
        ++
Subjt:  DA

XP_016900423.1 PREDICTED: rho-N domain-containing protein 1, chloroplastic isoform X1 [Cucumis melo]2.1e-18486.82Show/hide
Query:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK
        GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS GHRRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS+
Subjt:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK

Query:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENG
        NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRSS  G+G S+KD  FNHVKENG
Subjt:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENG

Query:  PYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG
        PYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+SPVPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ 
Subjt:  PYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG

Query:  ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLS
        +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+KH EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLLS
Subjt:  ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLS

Query:  DA
        ++
Subjt:  DA

XP_038887988.1 rho-N domain-containing protein 1, chloroplastic-like isoform X1 [Benincasa hispida]1.2e-19592.61Show/hide
Query:  FGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKN
        FGLSDSRCLPCSGVSGRAASVSSRSLCAE+RI+A VKFRPLNCTS+GASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERE+L+NVDE+DLLSSKN
Subjt:  FGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKN

Query:  GPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGS--GSSSKDFGFNHVKEN
        GPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+EAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGS  GSSSKDF FNHVKEN
Subjt:  GPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGS--GSSSKDFGFNHVKEN

Query:  GPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQES-EREHWEELQS
        G YDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPI+PGESIVDSTDGVNSKGVKLNGTE  S LKAKVWTRQES ER HWEELQS
Subjt:  GPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQES-EREHWEELQS

Query:  QGETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQL
        QGET+QEPE DQEYELEPEAESYEL+H+PDE E ELVNLLGVSSD+D+TF+DDVKDNEKFAKHDEHEDLNSLK+AELRAIAKSRSLKGFSKMKKSELVQL
Subjt:  QGETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQL

Query:  LSDAQV
        LSD  V
Subjt:  LSDAQV

XP_038887989.1 rho-N domain-containing protein 1, chloroplastic-like isoform X2 [Benincasa hispida]6.6e-19492.33Show/hide
Query:  LSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGP
        L+DSRCLPCSGVSGRAASVSSRSLCAE+RI+A VKFRPLNCTS+GASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERE+L+NVDE+DLLSSKNGP
Subjt:  LSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGP

Query:  LLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGS--GSSSKDFGFNHVKENGP
        LLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKK+EAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGS  GSSSKDF FNHVKENG 
Subjt:  LLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGS--GSSSKDFGFNHVKENGP

Query:  YDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQES-EREHWEELQSQG
        YDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPI+PGESIVDSTDGVNSKGVKLNGTE  S LKAKVWTRQES ER HWEELQSQG
Subjt:  YDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQES-EREHWEELQSQG

Query:  ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLS
        ET+QEPE DQEYELEPEAESYEL+H+PDE E ELVNLLGVSSD+D+TF+DDVKDNEKFAKHDEHEDLNSLK+AELRAIAKSRSLKGFSKMKKSELVQLLS
Subjt:  ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLS

Query:  DAQV
        D  V
Subjt:  DAQV

TrEMBL top hitse value%identityAlignment
A0A1S3BHF2 rho-N domain-containing protein 1, chloroplastic isoform X71.0e-18486.82Show/hide
Query:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK
        GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS GHRRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS+
Subjt:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK

Query:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENG
        NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRSS  G+G S+KD  FNHVKENG
Subjt:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENG

Query:  PYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG
        PYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+SPVPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ 
Subjt:  PYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG

Query:  ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLS
        +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+KH EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLLS
Subjt:  ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLS

Query:  DA
        ++
Subjt:  DA

A0A1S4DWR7 rho-N domain-containing protein 1, chloroplastic isoform X21.0e-18486.82Show/hide
Query:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK
        GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS GHRRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS+
Subjt:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK

Query:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENG
        NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRSS  G+G S+KD  FNHVKENG
Subjt:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENG

Query:  PYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG
        PYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+SPVPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ 
Subjt:  PYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG

Query:  ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLS
        +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+KH EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLLS
Subjt:  ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLS

Query:  DA
        ++
Subjt:  DA

A0A1S4DWS1 rho-N domain-containing protein 1, chloroplastic isoform X11.0e-18486.82Show/hide
Query:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK
        GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS GHRRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS+
Subjt:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK

Query:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENG
        NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRSS  G+G S+KD  FNHVKENG
Subjt:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENG

Query:  PYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG
        PYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+SPVPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ 
Subjt:  PYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG

Query:  ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLS
        +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+KH EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLLS
Subjt:  ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLS

Query:  DA
        ++
Subjt:  DA

A0A1S4DXI1 rho-N domain-containing protein 1, chloroplastic isoform X41.0e-18486.82Show/hide
Query:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK
        GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS GHRRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS+
Subjt:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK

Query:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENG
        NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRSS  G+G S+KD  FNHVKENG
Subjt:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENG

Query:  PYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG
        PYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+SPVPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ 
Subjt:  PYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQG

Query:  ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLS
        +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+KH EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLLS
Subjt:  ETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLS

Query:  DA
        ++
Subjt:  DA

A0A5D3DAG1 Rho-N domain-containing protein 17.9e-18586.6Show/hide
Query:  MGFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSS
        +GFGLSDSRCLPCSGVSGRAAS S RSLCAE+ IN PVKFRPLNCTS+G SFTCKASS GHRRNPDF KQNR G+SRSRNRQNEERE+LENVDE+DLLSS
Subjt:  MGFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSS

Query:  KNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKEN
        +NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKH+VEQGKRSS  G+G S+KD  FNHVKEN
Subjt:  KNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKEN

Query:  GPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQ
        GPYDEG+G+SIFGLS NLREKAQEP GSF RP SNFQR+SPVPRVKYQPIYPGESIVDST+G+NSKG+KLNGTE GS LKAKVWTRQESEREHWEELQSQ
Subjt:  GPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQ

Query:  GETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLL
         +TEQEPE DQE+E+EPEAE+Y+L+HE DEMEPELVNLLGVSSD+D+TFEDD+KDNE+F+KH EHE+LNSLKLAELRAIAKSRSL+GFSKMKKSELVQLL
Subjt:  GETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLL

Query:  SDA
        S++
Subjt:  SDA

SwissProt top hitse value%identityAlignment
Q8L4E7 SAP-like protein BP-732.0e-3636.8Show/hide
Query:  SFTCKASSGGHR-RNPDFSKQNRHGFSRSRNRQNEERENLENVDE--TDLLSSKNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEE
        S  C A+   HR R+ D ++  + G +R +++  +E+++ EN+DE  TD++SSKNGP +S++S  + QAT+ PG REKEIVELF++VQAQLR R   KEE
Subjt:  SFTCKASSGGHR-RNPDFSKQNRHGFSRSRNRQNEERENLENVDE--TDLLSSKNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEE

Query:  KKMEAQGQTKGSE-TVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVK
        KK E Q + +G   +VDSLL LLRKHSV+Q ++S         K+   +  K +      + +SIF  +    E+ +    +F RP SNF+R+SPVP VK
Subjt:  KKMEAQGQTKGSE-TVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVK

Query:  YQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQGETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVD
        +QP+    + VD+   +N+    +   EA   L+ K  T  E +     E  S  E E     D ++  + E ++ + D    E +   + +  V   +D
Subjt:  YQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQGETEQEPEPDQEYELEPEAESYELDHEPDEMEPELVNLLGVSSDVD

Query:  NTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSD
         + +  +K +          DL++LK+ ELR +AKSR +KG+SKMKK++LV+LLS+
Subjt:  NTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSD

Q94K75 Rho-N domain-containing protein 1, chloroplastic4.5e-6044.53Show/hide
Query:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK
        G+ LSDSRC   S VS R  ++   S C +++ N  +K  P       +SF C+ASSGG+RRNPDFS+ N+HG+ R  NRQ+  RE+ + ++ +D+LSS+
Subjt:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK

Query:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKME--AQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVK
        NGPL ++SS+PK QAT++PGPREKEIVELFRKVQAQLR R AA KEEKK+E  ++GQ K SETVDSLLKLLRKHS EQ KR            F      
Subjt:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKME--AQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVK

Query:  ENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQ
        +    D+   T     S N    A     SF+RP S+F+RKSPVPR +  P Y  E+  D      S    +  T+     K  V    E E E   E +
Subjt:  ENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQ

Query:  SQGETEQEPEP-----DQEYELEPEAESYELDHEPDEMEPELVN----LLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFS
         + E E EP P     + + EL+PE+ S+  + E D++  ++++    +L V SD D + +D  +D+++ A+ +  +DL+ LKL ELR IAKSR LKG S
Subjt:  SQGETEQEPEP-----DQEYELEPEAESYELDHEPDEMEPELVN----LLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFS

Query:  KMKKSELVQLL
        KMKK+ELV+LL
Subjt:  KMKKSELVQLL

Arabidopsis top hitse value%identityAlignment
AT1G06190.1 Rho termination factor3.2e-6144.53Show/hide
Query:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK
        G+ LSDSRC   S VS R  ++   S C +++ N  +K  P       +SF C+ASSGG+RRNPDFS+ N+HG+ R  NRQ+  RE+ + ++ +D+LSS+
Subjt:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK

Query:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKME--AQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVK
        NGPL ++SS+PK QAT++PGPREKEIVELFRKVQAQLR R AA KEEKK+E  ++GQ K SETVDSLLKLLRKHS EQ KR            F      
Subjt:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKME--AQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVK

Query:  ENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQ
        +    D+   T     S N    A     SF+RP S+F+RKSPVPR +  P Y  E+  D      S    +  T+     K  V    E E E   E +
Subjt:  ENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQ

Query:  SQGETEQEPEP-----DQEYELEPEAESYELDHEPDEMEPELVN----LLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFS
         + E E EP P     + + EL+PE+ S+  + E D++  ++++    +L V SD D + +D  +D+++ A+ +  +DL+ LKL ELR IAKSR LKG S
Subjt:  SQGETEQEPEP-----DQEYELEPEAESYELDHEPDEMEPELVN----LLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFS

Query:  KMKKSELVQLL
        KMKK+ELV+LL
Subjt:  KMKKSELVQLL

AT1G06190.2 Rho termination factor1.5e-4749.24Show/hide
Query:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK
        G+ LSDSRC   S VS R  ++   S C +++ N  +K  P       +SF C+ASSGG+RRNPDFS+ N+HG+ R  NRQ+  RE+ + ++ +D+LSS+
Subjt:  GFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSK

Query:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKME--AQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVK
        NGPL ++SS+PK QAT++PGPREKEIVELFRKVQAQLR R AA KEEKK+E  ++GQ K SETVDSLLKLLRKHS EQ KR            F      
Subjt:  NGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKME--AQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVK

Query:  ENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDST
        +    D+   T     S N    A     SF+RP S+F+RKSPVPR +  P Y  E+  D +
Subjt:  ENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDST

AT2G31150.1 ATP binding;ATPases, coupled to transmembrane movement of ions, phosphorylative mechanism2.2e-2538.82Show/hide
Query:  HRR-NPDFSKQNRHGFSRSRNRQNEERENL-ENVDETDLLSSKNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKMEAQGQTK
        HRR NPDFS+ N+HGF R RNR+NE+++ L +   E D+LSSKN                     EKEIVELF+KVQ QLR R AA KEEKK E   + +
Subjt:  HRR-NPDFSKQNRHGFSRSRNRQNEERENL-ENVDETDLLSSKNGPLLSISSTPKSQATATPGPREKEIVELFRKVQAQLRER-AAMKEEKKMEAQGQTK

Query:  G---SETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGE
        G   SETVDSLLKLLRKHS EQ K+              FN  K+    D+         S             F+RP S+F+R SPVPR K Q  Y  E
Subjt:  G---SETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLREKAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGE

Query:  SIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQGETEQEPEPDQ--EYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTF---
        +I D               EA S+  +  WT+++      ++++S+ E E EPEP+   EY+ EPE E+   ++EP E EPEL  L  VS     +F   
Subjt:  SIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQGETEQEPEPDQ--EYELEPEAESYELDHEPDEMEPELVNLLGVSSDVDNTF---

Query:  EDDVKDNEKFAKHDEHEDLNSL
        ED+ +++  F   +  +D  SL
Subjt:  EDDVKDNEKFAKHDEHEDLNSL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGCTTTGGACTGTCAGATAGCAGATGCCTACCATGCTCTGGAGTTTCAGGACGAGCAGCCTCGGTCTCTTCACGCTCTTTATGTGCTGAAAATAGAATCAATGCACC
GGTCAAATTCAGACCTCTAAACTGTACTTCAGTGGGAGCATCTTTTACATGCAAAGCCAGCTCAGGAGGTCATAGGAGAAACCCAGATTTTTCAAAGCAAAATAGGCATG
GCTTCTCAAGAAGTAGAAATAGGCAAAATGAGGAGAGAGAGAACCTTGAAAATGTTGATGAAACTGATTTATTATCATCTAAGAATGGACCATTACTTTCAATCTCTAGC
ACCCCAAAATCCCAGGCCACTGCTACCCCAGGCCCAAGGGAGAAGGAAATTGTTGAGCTTTTCAGAAAGGTTCAAGCTCAGCTTCGGGAGCGAGCTGCGATGAAAGAAGA
GAAGAAAATGGAAGCTCAAGGACAAACTAAAGGGAGTGAGACAGTGGATTCTCTTCTTAAGCTATTGAGAAAGCATTCGGTAGAGCAAGGGAAAAGAAGCAGTGGTGGTG
GTAGCGGCAGCAGCAGCAAGGACTTCGGTTTTAACCATGTCAAAGAGAATGGTCCATATGATGAAGGAAAAGGCACAAGCATTTTTGGCCTAAGTGCCAATTTGAGAGAG
AAGGCCCAAGAGCCAACAGGTTCTTTCAGTAGACCCGTATCAAATTTTCAACGTAAATCCCCCGTGCCTCGGGTGAAGTACCAACCAATTTACCCTGGGGAAAGTATTGT
CGACTCCACTGATGGTGTGAATTCAAAGGGAGTGAAACTTAATGGAACTGAGGCAGGTTCTCATCTGAAGGCAAAGGTATGGACTCGGCAGGAGTCGGAACGAGAGCACT
GGGAAGAGCTGCAATCACAAGGAGAGACAGAGCAGGAGCCAGAGCCAGACCAAGAGTATGAGTTGGAGCCAGAAGCTGAATCATATGAGCTAGACCATGAGCCTGATGAA
ATGGAGCCTGAACTTGTTAATTTATTAGGCGTGTCATCAGATGTTGACAACACGTTTGAAGATGATGTTAAAGACAATGAGAAATTTGCAAAGCATGATGAACATGAGGA
TTTGAACTCATTGAAGCTTGCTGAACTGAGGGCGATTGCCAAATCTCGCAGTTTGAAAGGGTTCTCGAAGATGAAGAAGAGCGAGCTCGTGCAGTTGTTAAGCGATGCTC
AGGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGCTTTGGACTGTCAGATAGCAGATGCCTACCATGCTCTGGAGTTTCAGGACGAGCAGCCTCGGTCTCTTCACGCTCTTTATGTGCTGAAAATAGAATCAATGCACC
GGTCAAATTCAGACCTCTAAACTGTACTTCAGTGGGAGCATCTTTTACATGCAAAGCCAGCTCAGGAGGTCATAGGAGAAACCCAGATTTTTCAAAGCAAAATAGGCATG
GCTTCTCAAGAAGTAGAAATAGGCAAAATGAGGAGAGAGAGAACCTTGAAAATGTTGATGAAACTGATTTATTATCATCTAAGAATGGACCATTACTTTCAATCTCTAGC
ACCCCAAAATCCCAGGCCACTGCTACCCCAGGCCCAAGGGAGAAGGAAATTGTTGAGCTTTTCAGAAAGGTTCAAGCTCAGCTTCGGGAGCGAGCTGCGATGAAAGAAGA
GAAGAAAATGGAAGCTCAAGGACAAACTAAAGGGAGTGAGACAGTGGATTCTCTTCTTAAGCTATTGAGAAAGCATTCGGTAGAGCAAGGGAAAAGAAGCAGTGGTGGTG
GTAGCGGCAGCAGCAGCAAGGACTTCGGTTTTAACCATGTCAAAGAGAATGGTCCATATGATGAAGGAAAAGGCACAAGCATTTTTGGCCTAAGTGCCAATTTGAGAGAG
AAGGCCCAAGAGCCAACAGGTTCTTTCAGTAGACCCGTATCAAATTTTCAACGTAAATCCCCCGTGCCTCGGGTGAAGTACCAACCAATTTACCCTGGGGAAAGTATTGT
CGACTCCACTGATGGTGTGAATTCAAAGGGAGTGAAACTTAATGGAACTGAGGCAGGTTCTCATCTGAAGGCAAAGGTATGGACTCGGCAGGAGTCGGAACGAGAGCACT
GGGAAGAGCTGCAATCACAAGGAGAGACAGAGCAGGAGCCAGAGCCAGACCAAGAGTATGAGTTGGAGCCAGAAGCTGAATCATATGAGCTAGACCATGAGCCTGATGAA
ATGGAGCCTGAACTTGTTAATTTATTAGGCGTGTCATCAGATGTTGACAACACGTTTGAAGATGATGTTAAAGACAATGAGAAATTTGCAAAGCATGATGAACATGAGGA
TTTGAACTCATTGAAGCTTGCTGAACTGAGGGCGATTGCCAAATCTCGCAGTTTGAAAGGGTTCTCGAAGATGAAGAAGAGCGAGCTCGTGCAGTTGTTAAGCGATGCTC
AGGTTTGAGAATGTCATGCTGGACAGGAACCTCTGGGTTTAGGATGTTTTAGGTTTTTTT
Protein sequenceShow/hide protein sequence
MGFGLSDSRCLPCSGVSGRAASVSSRSLCAENRINAPVKFRPLNCTSVGASFTCKASSGGHRRNPDFSKQNRHGFSRSRNRQNEERENLENVDETDLLSSKNGPLLSISS
TPKSQATATPGPREKEIVELFRKVQAQLRERAAMKEEKKMEAQGQTKGSETVDSLLKLLRKHSVEQGKRSSGGGSGSSSKDFGFNHVKENGPYDEGKGTSIFGLSANLRE
KAQEPTGSFSRPVSNFQRKSPVPRVKYQPIYPGESIVDSTDGVNSKGVKLNGTEAGSHLKAKVWTRQESEREHWEELQSQGETEQEPEPDQEYELEPEAESYELDHEPDE
MEPELVNLLGVSSDVDNTFEDDVKDNEKFAKHDEHEDLNSLKLAELRAIAKSRSLKGFSKMKKSELVQLLSDAQV