CuGenDBv2

Gene ID	Lsi05G010320
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	CRIB domain-containing protein
Genome location	chr05:17863888..17864310
RNA-Seq Expression	Lsi05G010320
Synteny	Lsi05G010320
Gene Ontology terms	NA
InterPro domains	NA

Homology

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GenBank top hits

e value

%identity

Alignment

KAA0037995.1 CRIB domain-containing protein RIC6-like [Cucumis melo var. makuwa]

2.6e-49

85.71

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Query:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA
        MAVT+RD+PELPKSSRRQSST+GGTVAESPTMR+KSEKAK+KKSSK+KESSSSD +GPSRRNSDLNQG ES T+SLPGVPKKARRKKSKEEGSTR+RSKA
Subjt:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA

Query:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT
        +AAE+CSSQFS+NGSD     GSISRSNDDDLLTGDGVFT
Subjt:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT

KGN57890.1 hypothetical protein Csa_011162 [Cucumis sativus]

3.1e-50

85.71

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Query:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA
        MAVT+RDMPELPKSS+RQSSTVGG+VAESPTMR+KSEK K+KKSSK++ESSSSDNIGPSRRNSDLNQGSESPT+SLPGVPKK RRKKSKEEGST++RSKA
Subjt:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA

Query:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT
        +AAETCSSQFS+N SD     GSISRSNDDDLLTGDGVFT
Subjt:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT

XP_008447656.1 PREDICTED: CRIB domain-containing protein RIC6-like [Cucumis melo]

2.6e-49

85.71

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Query:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA
        MAVT+RD+PELPKSSRRQSST+GGTVAESPTMR+KSEKAK+KKSSK+KESSSSD +GPSRRNSDLNQG ES T+SLPGVPKKARRKKSKEEGSTR+RSKA
Subjt:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA

Query:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT
        +AAE+CSSQFS+NGSD     GSISRSNDDDLLTGDGVFT
Subjt:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT

XP_031737542.1 CRIB domain-containing protein RIC6 [Cucumis sativus]

3.1e-50

85.71

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Query:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA
        MAVT+RDMPELPKSS+RQSSTVGG+VAESPTMR+KSEK K+KKSSK++ESSSSDNIGPSRRNSDLNQGSESPT+SLPGVPKK RRKKSKEEGST++RSKA
Subjt:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA

Query:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT
        +AAETCSSQFS+N SD     GSISRSNDDDLLTGDGVFT
Subjt:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT

XP_038888498.1 CRIB domain-containing protein RIC7-like [Benincasa hispida]

1.4e-50

88.57

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Query:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA
        MAVTTRD+PELPKSSRRQSSTVGG+V ESPT REKSEK K+KKSSKSKESSSSD    SRR+SDLNQGSESPTQSLPGVPKKARRKKSKEEGSTR+RSK 
Subjt:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA

Query:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT
        +A ETCSSQ SDNGSDAGSVAGSISRSNDDDLLTGDGVFT
Subjt:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L7D1 CRIB domain-containing protein

1.5e-50

85.71

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Query:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA
        MAVT+RDMPELPKSS+RQSSTVGG+VAESPTMR+KSEK K+KKSSK++ESSSSDNIGPSRRNSDLNQGSESPT+SLPGVPKK RRKKSKEEGST++RSKA
Subjt:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA

Query:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT
        +AAETCSSQFS+N SD     GSISRSNDDDLLTGDGVFT
Subjt:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT

A0A1S3BHX9 CRIB domain-containing protein RIC6-like

1.3e-49

85.71

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Query:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA
        MAVT+RD+PELPKSSRRQSST+GGTVAESPTMR+KSEKAK+KKSSK+KESSSSD +GPSRRNSDLNQG ES T+SLPGVPKKARRKKSKEEGSTR+RSKA
Subjt:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA

Query:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT
        +AAE+CSSQFS+NGSD     GSISRSNDDDLLTGDGVFT
Subjt:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT

A0A5A7T947 CRIB domain-containing protein RIC6-like

1.3e-49

85.71

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Query:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA
        MAVT+RD+PELPKSSRRQSST+GGTVAESPTMR+KSEKAK+KKSSK+KESSSSD +GPSRRNSDLNQG ES T+SLPGVPKKARRKKSKEEGSTR+RSKA
Subjt:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA

Query:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT
        +AAE+CSSQFS+NGSD     GSISRSNDDDLLTGDGVFT
Subjt:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT

A0A6J1HJD0 CRIB domain-containing protein RIC7-like

7.8e-39

74.29

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Query:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA
        MAVTTRD+PELPKSSRRQSSTVG       T +EKSEK ++KKSSKSKE   SD +  SRR++DLNQG ESPTQ  PG+PKKARRK+SKE+GSTR++SKA
Subjt:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA

Query:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT
        +AAE+CSSQFSDNGSDAGS+AGSISRSN++DLLTGD VFT
Subjt:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT

A0A6J1HR56 CRIB domain-containing protein RIC7-like

1.8e-40

74.29

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Query:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA
        MAVTTRD+PELPKSSRRQSSTVG       T +EKSEK ++KKSSKSKES++S+ +  SRR++DLNQG ESPTQ+ PG+PKKARRK+SKE+GSTR++SKA
Subjt:  MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKA

Query:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT
        +A E+CSSQFSDNGSDAGS+AGSISRSND+DLLTGD VFT
Subjt:  SAAETCSSQFSDNGSDAGSVAGSISRSNDDDLLTGDGVFT

SwissProt top hits

e value

%identity

Alignment

Q1G3K8 CRIB domain-containing protein RIC7

6.0e-04

39.32

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Query:  TRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSK----SKESSSSDNIGPSRRNS-DLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSK
        TRD+P+LPKS+R+ SS  G     SPT +E+S+K K + S+K    S+ +   D+   SRR + D +      +  LP VPKK++RKKSKE G+  +   
Subjt:  TRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSK----SKESSSSDNIGPSRRNS-DLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSK

Query:  ASAAETCSSQFSDNGSD
        +  +E  +   SD GSD
Subjt:  ASAAETCSSQFSDNGSD

Arabidopsis top hits

e value

%identity

Alignment

AT4G28556.1 PAK-box/P21-Rho-binding family protein

4.2e-05

39.32

Show/hide

Query:  TRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSK----SKESSSSDNIGPSRRNS-DLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSK
        TRD+P+LPKS+R+ SS  G     SPT +E+S+K K + S+K    S+ +   D+   SRR + D +      +  LP VPKK++RKKSKE G+  +   
Subjt:  TRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSK----SKESSSSDNIGPSRRNS-DLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSK

Query:  ASAAETCSSQFSDNGSD
        +  +E  +   SD GSD
Subjt:  ASAAETCSSQFSDNGSD

Sequences

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CDS sequence

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ATGGCAGTTACGACTCGGGACATGCCAGAGCTACCAAAATCATCGAGACGGCAGTCGTCGACCGTCGGCGGAACCGTGGCGGAGTCCCCGACGATGAGAGAGAAATCGGA
GAAGGCTAAGGCAAAGAAGTCTTCAAAGTCCAAGGAATCTTCTTCGTCAGATAACATTGGACCGTCGCGCCGGAACTCCGATCTGAACCAGGGCAGCGAGTCGCCGACGC
AGAGCCTCCCTGGAGTTCCGAAGAAAGCGCGGCGGAAGAAATCAAAGGAGGAAGGATCGACGAGAACGAGATCCAAAGCCTCGGCGGCGGAGACTTGCTCGTCTCAGTTC
TCCGATAACGGGTCGGACGCCGGATCCGTCGCCGGATCCATTTCCAGATCCAACGACGATGACTTGTTAACGGGAGATGGGGTTTTTACATGA

mRNA sequence

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Protein sequence

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MAVTTRDMPELPKSSRRQSSTVGGTVAESPTMREKSEKAKAKKSSKSKESSSSDNIGPSRRNSDLNQGSESPTQSLPGVPKKARRKKSKEEGSTRTRSKASAAETCSSQF
SDNGSDAGSVAGSISRSNDDDLLTGDGVFT

Lsi05G010320 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome