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Lsi05G010660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G010660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:18152948..18157897
RNA-Seq ExpressionLsi05G010660
SyntenyLsi05G010660
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CAB3495874.1 unnamed protein product [Digitaria exilis]7.5e-0738.56Show/hide
Query:  ILMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLSGIVK----------------------PPISTSSCALRGSNNGAAGCNRKVSFTTACRYGSLEMS
        IL  +  PG I RP PNG+SSK  PLTS S P N SG                         PP   SS   RG+++G AGC R VSFT A RYGSL MS
Subjt:  ILMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLSGIVK----------------------PPISTSSCALRGSNNGAAGCNRKVSFTTACRYGSLEMS

Query:  ASSTASSIIPDTYFLNSLANS-EFGSAKSTEKIVLESKFNVVANTNLPTSTAS
         S T  S  P T   +S+A +   G  +S+E     +   V A  ++P +  S
Subjt:  ASSTASSIIPDTYFLNSLANS-EFGSAKSTEKIVLESKFNVVANTNLPTSTAS

KAF4403977.1 hypothetical protein G4B88_014433 [Cannabis sativa]2.7e-1252.63Show/hide
Query:  DILMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLS---------------------------GIVKPPISTSSCALRGSNNGAAGCNRKVSFT
        +IL+A G+PG  LRPPPNG +SKL PLTS SDP NLS                           GIVKP I TS  ALRGSNNG AGCNR VSF+
Subjt:  DILMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLS---------------------------GIVKPPISTSSCALRGSNNGAAGCNRKVSFT

OWM71928.1 hypothetical protein CDL15_Pgr017811 [Punica granatum]1.2e-0471.79Show/hide
Query:  DILMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLSGI
        +ILMA G PG IL PPPNG+SSKL PLTS+S P+NL GI
Subjt:  DILMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLSGI

PRQ17923.1 hypothetical protein RchiOBHm_Chr7g0200261 [Rosa chinensis]6.5e-1147.47Show/hide
Query:  DILMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLSGI---------------------------VKPPISTSSCALRGSNNGAAGCNRKVSFTTACR
        +IL+ANG PG IL P PNG SSK RPLTS SDP+NLSG+                           V+P ISTS  A RGS+ G AGC R VS   AC+
Subjt:  DILMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLSGI---------------------------VKPPISTSSCALRGSNNGAAGCNRKVSFTTACR

XP_007153085.1 hypothetical protein PHAVU_003G005600g [Phaseolus vulgaris]6.1e-0948.45Show/hide
Query:  LMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLS---------------------------GIVKPPISTSSCALRGSNNGAAGCNRKVSFTTACR
        LMA  +PG IL PPP G SSKL PL SISDPRNLS                           GIV P IS SS A  GS +GA GC+ KVSF  AC+
Subjt:  LMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLS---------------------------GIVKPPISTSSCALRGSNNGAAGCNRKVSFTTACR

TrEMBL top hitse value%identityAlignment
A0A218WHE8 Uncharacterized protein5.8e-0571.79Show/hide
Query:  DILMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLSGI
        +ILMA G PG IL PPPNG+SSKL PLTS+S P+NL GI
Subjt:  DILMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLSGI

A0A2P6P7L1 Uncharacterized protein3.2e-1147.47Show/hide
Query:  DILMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLSGI---------------------------VKPPISTSSCALRGSNNGAAGCNRKVSFTTACR
        +IL+ANG PG IL P PNG SSK RPLTS SDP+NLSG+                           V+P ISTS  A RGS+ G AGC R VS   AC+
Subjt:  DILMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLSGI---------------------------VKPPISTSSCALRGSNNGAAGCNRKVSFTTACR

A0A7J6I8W5 Uncharacterized protein1.3e-1252.63Show/hide
Query:  DILMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLS---------------------------GIVKPPISTSSCALRGSNNGAAGCNRKVSFT
        +IL+A G+PG  LRPPPNG +SKL PLTS SDP NLS                           GIVKP I TS  ALRGSNNG AGCNR VSF+
Subjt:  DILMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLS---------------------------GIVKPPISTSSCALRGSNNGAAGCNRKVSFT

A0A7J6ICP8 Uncharacterized protein1.7e-0475Show/hide
Query:  MANGSPGQILRPPPNGSSSKLRPLTSISDPRNLSGI
        MA G PGQIL PPPNG SSK RP TSISD +NLSG+
Subjt:  MANGSPGQILRPPPNGSSSKLRPLTSISDPRNLSGI

V7C4L6 Uncharacterized protein3.0e-0948.45Show/hide
Query:  LMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLS---------------------------GIVKPPISTSSCALRGSNNGAAGCNRKVSFTTACR
        LMA  +PG IL PPP G SSKL PL SISDPRNLS                           GIV P IS SS A  GS +GA GC+ KVSF  AC+
Subjt:  LMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLS---------------------------GIVKPPISTSSCALRGSNNGAAGCNRKVSFTTACR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGACATTCTCATGGCCAATGGAAGTCCAGGGCAAATCCTCCGCCCTCCGCCGAACGGAAGCAGCTCGAAGCTCCGCCCTCTGACATCAATTTCCGATCCCAGAAACCT
CTCCGGGATTGTGAAACCTCCAATTTCAACATCTTCTTGCGCCTTACGCGGTAGTAACAATGGAGCTGCTGGATGCAATCGGAAAGTCTCCTTCACCACCGCTTGTAGAT
ATGGCAGTCTCGAAATGTCTGCTTCCTCCACTGCTTCTTCCATCATTCCCGACACGTATTTCTTAAACTCTCTTGCTAATTCAGAATTCGGATCTGCTAAATCAACAGAG
AAAATTGTGTTGGAGAGTAAATTCAACGTAGTCGCAAACACTAACCTCCCTACATCCACTGCCTCGCCTTTCAACGCACTTTTCCGAACAATCTCCACAAGCTCTTCCAC
TTTCTTCCGACGAAGATTCTCGTTGGCGTCCAGAATTTTTGCAGTGAATAACATATTGTTGCAAATTTTGCGAAAGTTCCTCCAGAGAGGAGAAACAGAAATCCATGCAA
ATCCAGTTTCGTCATGA
mRNA sequenceShow/hide mRNA sequence
ATGGACATTCTCATGGCCAATGGAAGTCCAGGGCAAATCCTCCGCCCTCCGCCGAACGGAAGCAGCTCGAAGCTCCGCCCTCTGACATCAATTTCCGATCCCAGAAACCT
CTCCGGGATTGTGAAACCTCCAATTTCAACATCTTCTTGCGCCTTACGCGGTAGTAACAATGGAGCTGCTGGATGCAATCGGAAAGTCTCCTTCACCACCGCTTGTAGAT
ATGGCAGTCTCGAAATGTCTGCTTCCTCCACTGCTTCTTCCATCATTCCCGACACGTATTTCTTAAACTCTCTTGCTAATTCAGAATTCGGATCTGCTAAATCAACAGAG
AAAATTGTGTTGGAGAGTAAATTCAACGTAGTCGCAAACACTAACCTCCCTACATCCACTGCCTCGCCTTTCAACGCACTTTTCCGAACAATCTCCACAAGCTCTTCCAC
TTTCTTCCGACGAAGATTCTCGTTGGCGTCCAGAATTTTTGCAGTGAATAACATATTGTTGCAAATTTTGCGAAAGTTCCTCCAGAGAGGAGAAACAGAAATCCATGCAA
ATCCAGTTTCGTCATGACCGTGAGCTTTCAGCGCATCTGGAATGGCTCTGTTACACAAAAGCTGGTCGTTTGTTTGTAAAACCTCTTTAGCCATGACGGAAGAAGAAACC
ACGACGGTTGTAACTCGTCCGAGTTTCAGACTCATAATTGGACCATGTACCTTAGCCATGGCGGTGAGCGACTTGTGAGGCTTGTCGCCGAGATCCAAGAGGTTTCCGAT
GAGTGGCAGAGGCTTTGGTCCCGGAGGTAGCTTCGACGTAGTTCTTGGCTTGGATTTAAGCTTCCAAATGAAGAAGAAGAAGGGAAGAAAGAAAGTGAGGATGATTGAAA
ACTCCATTATCGTTGATTGTGTAACGCTTTAATTTTTATAGTTTTGAATGCGACCAAATAAGAGAAAATTCACGGTCCCTCTTCCCTCTATGTCAGGCAAACATGAACAA
ATATGGTAATTGGTGTCATATTGTAACAACACGTTTGTCCTTTAGCTTTTTCTCAAAAATTAAAATTAAAAATAATAAAGTCTTATGCATATAGGAAAAAGGGCAAATGG
GTAATT
Protein sequenceShow/hide protein sequence
MDILMANGSPGQILRPPPNGSSSKLRPLTSISDPRNLSGIVKPPISTSSCALRGSNNGAAGCNRKVSFTTACRYGSLEMSASSTASSIIPDTYFLNSLANSEFGSAKSTE
KIVLESKFNVVANTNLPTSTASPFNALFRTISTSSSTFFRRRFSLASRIFAVNNILLQILRKFLQRGETEIHANPVSS