; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G010680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G010680
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionribokinase isoform X1
Genome locationchr05:18184216..18189759
RNA-Seq ExpressionLsi05G010680
SyntenyLsi05G010680
Gene Ontology termsGO:0019252 - starch biosynthetic process (biological process)
GO:0044281 - small molecule metabolic process (biological process)
GO:0046835 - carbohydrate phosphorylation (biological process)
GO:0016773 - phosphotransferase activity, alcohol group as acceptor (molecular function)
GO:0019200 - carbohydrate kinase activity (molecular function)
InterPro domainsIPR029056 - Ribokinase-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0037911.1 ribokinase isoform X1 [Cucumis melo var. makuwa]7.2e-3585.19Show/hide
Query:  MMTLPAFLSSNTLL-HSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT
        M  LP  LSSN LL HSSPT LL SKS RP MSSST+SS  IS PENRVVLGVG  SVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT
Subjt:  MMTLPAFLSSNTLL-HSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT

Query:  PRIISKVA
        PRIISKVA
Subjt:  PRIISKVA

XP_004152009.1 ribokinase isoform X1 [Cucumis sativus]3.4e-3785.19Show/hide
Query:  MMTLPAFLSSNTL-LHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT
        M  LP  LSSN L LHSSPTF+LFSKS RP MSSST+SS  IS PENRVVLGVG+ +VDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT
Subjt:  MMTLPAFLSSNTL-LHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT

Query:  PRIISKVA
        PRIISKVA
Subjt:  PRIISKVA

XP_008447353.1 PREDICTED: ribokinase isoform X1 [Cucumis melo]7.2e-3585.19Show/hide
Query:  MMTLPAFLSSNTLL-HSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT
        M  LP  LSSN LL HSSPT LL SKS RP MSSST+SS  IS PENRVVLGVG  SVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT
Subjt:  MMTLPAFLSSNTLL-HSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT

Query:  PRIISKVA
        PRIISKVA
Subjt:  PRIISKVA

XP_031738611.1 ribokinase isoform X2 [Cucumis sativus]3.4e-3785.19Show/hide
Query:  MMTLPAFLSSNTL-LHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT
        M  LP  LSSN L LHSSPTF+LFSKS RP MSSST+SS  IS PENRVVLGVG+ +VDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT
Subjt:  MMTLPAFLSSNTL-LHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT

Query:  PRIISKVA
        PRIISKVA
Subjt:  PRIISKVA

XP_038888957.1 ribokinase isoform X1 [Benincasa hispida]4.2e-4393.46Show/hide
Query:  MMTLPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTP
        M  L AF+SS TLLHSSPTFL FSKSTRP+MSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTP
Subjt:  MMTLPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTP

Query:  RIISKVA
        RIISKVA
Subjt:  RIISKVA

TrEMBL top hitse value%identityAlignment
A0A1S3BH87 ribokinase isoform X13.5e-3585.19Show/hide
Query:  MMTLPAFLSSNTLL-HSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT
        M  LP  LSSN LL HSSPT LL SKS RP MSSST+SS  IS PENRVVLGVG  SVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT
Subjt:  MMTLPAFLSSNTLL-HSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT

Query:  PRIISKVA
        PRIISKVA
Subjt:  PRIISKVA

A0A5A7T8H5 Ribokinase isoform X13.5e-3585.19Show/hide
Query:  MMTLPAFLSSNTLL-HSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT
        M  LP  LSSN LL HSSPT LL SKS RP MSSST+SS  IS PENRVVLGVG  SVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT
Subjt:  MMTLPAFLSSNTLL-HSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLT

Query:  PRIISKVA
        PRIISKVA
Subjt:  PRIISKVA

A0A6J1HGB8 ribokinase-like isoform X22.3e-3479.09Show/hide
Query:  MTLPAFLSSNTLLHS----SPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLG
        M LPAF+SS TL+HS    +  FL      RPR+SSSTSSSV ISLP+NRVVLGVG+ +VDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLG
Subjt:  MTLPAFLSSNTLLHS----SPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLG

Query:  LTPRIISKVA
        LTPRIISKVA
Subjt:  LTPRIISKVA

A0A6J1HH81 ribokinase-like isoform X12.3e-3479.09Show/hide
Query:  MTLPAFLSSNTLLHS----SPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLG
        M LPAF+SS TL+HS    +  FL      RPR+SSSTSSSV ISLP+NRVVLGVG+ +VDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLG
Subjt:  MTLPAFLSSNTLLHS----SPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLG

Query:  LTPRIISKVA
        LTPRIISKVA
Subjt:  LTPRIISKVA

A0A6J1HTZ4 ribokinase-like isoform X12.9e-3480Show/hide
Query:  MTLPAFLSSNTLLHS----SPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLG
        M LPAF+SS TL+HS    +  FL       PRMSSSTSSSV ISLPENRVVLGVG+ +VDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLG
Subjt:  MTLPAFLSSNTLLHS----SPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLG

Query:  LTPRIISKVA
        LTPRIISKVA
Subjt:  LTPRIISKVA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G28706.1 pfkB-like carbohydrate kinase family protein2.2e-2158.65Show/hide
Query:  LPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRII
        LP F +S   L +S  F      TR RMSSS+S       P+N +VLG G  +VDFLA V SYP  DDKIR+TSLKVQGGGN  NALT AARLGL  R+I
Subjt:  LPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRII

Query:  SKVA
        SKVA
Subjt:  SKVA

AT4G28706.2 pfkB-like carbohydrate kinase family protein2.8e-2158.65Show/hide
Query:  LPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRII
        LP F +S   L +S  F  F    R RMSSS+S       P+N +VLG G  +VDFLA V SYP  DDKIR+TSLKVQGGGN  NALT AARLGL  R+I
Subjt:  LPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRII

Query:  SKVA
        SKVA
Subjt:  SKVA

AT4G28706.3 pfkB-like carbohydrate kinase family protein2.8e-2158.65Show/hide
Query:  LPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRII
        LP F +S   L +S  F  F    R RMSSS+S       P+N +VLG G  +VDFLA V SYP  DDKIR+TSLKVQGGGN  NALT AARLGL  R+I
Subjt:  LPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRII

Query:  SKVA
        SKVA
Subjt:  SKVA

AT4G28706.4 pfkB-like carbohydrate kinase family protein2.8e-2158.65Show/hide
Query:  LPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRII
        LP F +S   L +S  F  F    R RMSSS+S       P+N +VLG G  +VDFLA V SYP  DDKIR+TSLKVQGGGN  NALT AARLGL  R+I
Subjt:  LPAFLSSNTLLHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRII

Query:  SKVA
        SKVA
Subjt:  SKVA

AT5G43910.2 pfkB-like carbohydrate kinase family protein3.9e-1558.33Show/hide
Query:  SSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA
        SS    ++P   +VLG G   +D+L  VAS+P PD KIR TS KVQGGGN GNALT  ARLGL  RI++KVA
Subjt:  SSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVA


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
TTTGGTGTTGGTACTACATCTATTGATTTCTTGGCGACAGTGGCTTCTTATCCAAATCCTGACGACAAAATTCGAACCGCAAGCTTAAAGGTTGCAGATGATACTCATAT
ATTGAGTTCAACAATATATGAACCAGTCGAGCTATGCTCATCATTAGCTCACGGCTTAAGTATTAATTGTAGGCTGTTGGATGTGTCGTGCTTTGGGTGCTCGAAGCGGT
CTTCCATATCACGGGTGGCGAATAGGGGAAGGAGTCAGCTCGGCGCCGGTTCTTCTACTCCCATAAACAAGATGATGACGTTGCCGGCTTTCCTTTCAAGCAATACGCTT
CTTCATTCTTCTCCAACCTTCCTTCTCTTCTCCAAATCAACCAGGCCGAGAATGTCCTCGTCAACCTCCTCCTCGGTTCCGATTTCACTTCCTGAAAATCGTGTGGTTCT
TGGTGTTGGTGCTACTTCTGTTGATTTTTTGGCGGCAGTGGCTTCTTATCCCAATCCTGACGACAAAATTAGAACCACAAGCTTAAAGGTACAAGGTGGAGGAAATGTAG
GGAATGCTTTAACTTCTGCAGCTCGGTTGGGTTTAACACCAAGGATAATTTCCAAGGTTGCTCTTACCAACTTTTAA
mRNA sequenceShow/hide mRNA sequence
TTTGGTGTTGGTACTACATCTATTGATTTCTTGGCGACAGTGGCTTCTTATCCAAATCCTGACGACAAAATTCGAACCGCAAGCTTAAAGGTTGCAGATGATACTCATAT
ATTGAGTTCAACAATATATGAACCAGTCGAGCTATGCTCATCATTAGCTCACGGCTTAAGTATTAATTGTAGGCTGTTGGATGTGTCGTGCTTTGGGTGCTCGAAGCGGT
CTTCCATATCACGGGTGGCGAATAGGGGAAGGAGTCAGCTCGGCGCCGGTTCTTCTACTCCCATAAACAAGATGATGACGTTGCCGGCTTTCCTTTCAAGCAATACGCTT
CTTCATTCTTCTCCAACCTTCCTTCTCTTCTCCAAATCAACCAGGCCGAGAATGTCCTCGTCAACCTCCTCCTCGGTTCCGATTTCACTTCCTGAAAATCGTGTGGTTCT
TGGTGTTGGTGCTACTTCTGTTGATTTTTTGGCGGCAGTGGCTTCTTATCCCAATCCTGACGACAAAATTAGAACCACAAGCTTAAAGGTACAAGGTGGAGGAAATGTAG
GGAATGCTTTAACTTCTGCAGCTCGGTTGGGTTTAACACCAAGGATAATTTCCAAGGTTGCTCTTACCAACTTTTAA
Protein sequenceShow/hide protein sequence
FGVGTTSIDFLATVASYPNPDDKIRTASLKVADDTHILSSTIYEPVELCSSLAHGLSINCRLLDVSCFGCSKRSSISRVANRGRSQLGAGSSTPINKMMTLPAFLSSNTL
LHSSPTFLLFSKSTRPRMSSSTSSSVPISLPENRVVLGVGATSVDFLAAVASYPNPDDKIRTTSLKVQGGGNVGNALTSAARLGLTPRIISKVALTNF