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Lsi05G010780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G010780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr05:18367814..18368757
RNA-Seq ExpressionLsi05G010780
SyntenyLsi05G010780
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652336.1 hypothetical protein Csa_021865 [Cucumis sativus]3.1e-3361.61Show/hide
Query:  GSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFN
        GS W V+I N QK ATL  HCKSKD+DLG  VL+ KG Y W FKEN+ QTTLFWC+F SS  GHASFEVFWPE G WL  RC+  NC W A   GF L N
Subjt:  GSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFN

Query:  ISQQNYEFQHPW
        I ++ +EF H W
Subjt:  ISQQNYEFQHPW

XP_008458671.1 PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo]4.2e-3864.66Show/hide
Query:  QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGV-YDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGF
        Q+P + W+VTI+N+Q  A+L VHCKSKD+DLGVHV+  +G  Y W FKEN LQTT FWCNF  S+ GHASFEVFWPE GTWLSDRC++ NC+WVA   GF
Subjt:  QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGV-YDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGF

Query:  SLFNISQQNYEFQHPW
        SL N   +  EFQHPW
Subjt:  SLFNISQQNYEFQHPW

XP_011656368.1 S-protein homolog 1 [Cucumis sativus]1.5e-3562.39Show/hide
Query:  QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGV-YDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRC-NDRNCIWVADEKG
        Q+P + W VTI+N+Q  A+L VHCKSKD+DLGVHV+  +G  Y W FKEN LQTT +WC+F  SK GHASFEVFWPE GTW SDRC ++ NC+WVA   G
Subjt:  QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGV-YDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRC-NDRNCIWVADEKG

Query:  FSLFNISQQNYEFQHPW
        FSL N   +  EFQHPW
Subjt:  FSLFNISQQNYEFQHPW

XP_022137291.1 S-protein homolog 1-like [Momordica charantia]1.2e-3258.97Show/hide
Query:  QVPGSSWKVTILNHQK-YATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVA-DEKG
        Q PGS W+VTI N+ K  A LTVHCKSKD+DLG HV+ F+G Y+W+FKEN  QTTLFWCNF  S YGHAS EVFWPE   WL+ RC+  NCIWVA  ++G
Subjt:  QVPGSSWKVTILNHQK-YATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVA-DEKG

Query:  FSLFNISQQNYEFQHPW
          L ++ Q+ +E ++ W
Subjt:  FSLFNISQQNYEFQHPW

XP_038907112.1 S-protein homolog 74-like [Benincasa hispida]2.2e-4268.97Show/hide
Query:  QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGV-YDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGF
        Q+P ++W+VTI+N+QK A L VHCKSKD+DLGVHV+  +G  Y+W FKEN LQTT FWCNF  S+ GHASFEVFWPE+GTWLSDRC+D NC+WVAD KGF
Subjt:  QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGV-YDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGF

Query:  SLFNISQQNYEFQHPW
        SL NI  +  EFQHPW
Subjt:  SLFNISQQNYEFQHPW

TrEMBL top hitse value%identityAlignment
A0A0A0KA40 S-protein homolog7.3e-3662.39Show/hide
Query:  QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGV-YDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRC-NDRNCIWVADEKG
        Q+P + W VTI+N+Q  A+L VHCKSKD+DLGVHV+  +G  Y W FKEN LQTT +WC+F  SK GHASFEVFWPE GTW SDRC ++ NC+WVA   G
Subjt:  QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGV-YDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRC-NDRNCIWVADEKG

Query:  FSLFNISQQNYEFQHPW
        FSL N   +  EFQHPW
Subjt:  FSLFNISQQNYEFQHPW

A0A1S3C8Z6 S-protein homolog2.0e-3864.66Show/hide
Query:  QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGV-YDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGF
        Q+P + W+VTI+N+Q  A+L VHCKSKD+DLGVHV+  +G  Y W FKEN LQTT FWCNF  S+ GHASFEVFWPE GTWLSDRC++ NC+WVA   GF
Subjt:  QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGV-YDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGF

Query:  SLFNISQQNYEFQHPW
        SL N   +  EFQHPW
Subjt:  SLFNISQQNYEFQHPW

A0A6J1C659 S-protein homolog5.8e-3358.97Show/hide
Query:  QVPGSSWKVTILNHQK-YATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVA-DEKG
        Q PGS W+VTI N+ K  A LTVHCKSKD+DLG HV+ F+G Y+W+FKEN  QTTLFWCNF  S YGHAS EVFWPE   WL+ RC+  NCIWVA  ++G
Subjt:  QVPGSSWKVTILNHQK-YATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVA-DEKG

Query:  FSLFNISQQNYEFQHPW
          L ++ Q+ +E ++ W
Subjt:  FSLFNISQQNYEFQHPW

A0A6J1GSD6 S-protein homolog6.6e-2956.76Show/hide
Query:  SSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNI
        S+W+V I+N  K +TL VHCKSKD+DLG HV+     Y W+F EN+LQTTL+WCNF SSK G AS +VFWPE   WLSDRCN   CIWVA + G S+   
Subjt:  SSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFNI

Query:  SQQNYEFQHPW
        +   YE  +PW
Subjt:  SQQNYEFQHPW

A0A6J1KR58 S-protein homolog8.6e-2953.91Show/hide
Query:  QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFS
        Q+P S W+VTI NH   +TL VHCKSKDNDLG H +     Y  +FKEN+ QTT FWC+F SSKYG  + +VFWPE G+ LSD CND NC+W A + G  
Subjt:  QVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFS

Query:  LFNISQQNYEFQHPW
        L   S  +Y+  +PW
Subjt:  LFNISQQNYEFQHPW

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 62.1e-1137.89Show/hide
Query:  GSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKG
        G   +V I N   Y  L VHCKS+D+D G H+L   G+Y W F  N + +TL++C F+  +     F+++        S RC  RNC W A E G
Subjt:  GSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKG

F4JLS0 S-protein homolog 15.1e-1839.13Show/hide
Query:  SSWKVTILNHQKYA-TLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFN
        S W+VT++N      TL +HCKSK++DLG   L F+  + W F EN+L +T FWC  N    GH +  VFW +    L  RC  +NCIW A   G  L+N
Subjt:  SSWKVTILNHQKYA-TLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFN

Query:  ISQQNYEFQHPWTPG
         +         W  G
Subjt:  ISQQNYEFQHPWTPG

P0DN92 S-protein homolog 242.3e-1031.13Show/hide
Query:  METYSKNDQVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIW
        ++     + + G   +VTI N   Y  L +HCKS+D+DLG H+L    ++ W+F  N   +TL++C F+  +     FE++      +   RC   NC W
Subjt:  METYSKNDQVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIW

Query:  VADEKG
         A++ G
Subjt:  VADEKG

Q2HQ46 S-protein homolog 746.6e-1838.58Show/hide
Query:  ETYSKNDQVPG-SSWKVTILNHQKYA-TLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCI
        +T +++  VP  S W+VT+ N      TL +HCKSK+NDLG   L F   + W F EN+L +TLFWC + S   GH + +VFW +    L  RC+ +NC+
Subjt:  ETYSKNDQVPG-SSWKVTILNHQKYA-TLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCI

Query:  WVADEKGFSLFNISQQNYEFQHPWTPG
        W A   G  L+N +         W  G
Subjt:  WVADEKGFSLFNISQQNYEFQHPWTPG

Q9FI84 S-protein homolog 273.9e-1033.04Show/hide
Query:  ETYSKNDQ---VPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNC
        ET+ ++ +   + G   ++T+ N+  Y  L +HCKSKD+DLG H+     +Y W+F  N   +TL++C F+  +     F++   E   +   RC  RNC
Subjt:  ETYSKNDQ---VPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNC

Query:  IWVADEKGFSLFNIS
         W A  K  SL+  S
Subjt:  IWVADEKGFSLFNIS

Arabidopsis top hitse value%identityAlignment
AT4G16195.1 Plant self-incompatibility protein S1 family1.8e-1029.17Show/hide
Query:  SKNDQVPGSSWKVTILNH-QKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVAD
        S N   P S   V I N      TL  HCKSKD+DLG   L     + + F       TL++C+F+     H SF+++     +   ++C    C+W   
Subjt:  SKNDQVPGSSWKVTILNH-QKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVAD

Query:  EKGFSLFNISQQNYEFQHPW
          G   FN   + ++  +PW
Subjt:  EKGFSLFNISQQNYEFQHPW

AT4G16295.1 S-protein homologue 13.6e-1939.13Show/hide
Query:  SSWKVTILNHQKYA-TLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFN
        S W+VT++N      TL +HCKSK++DLG   L F+  + W F EN+L +T FWC  N    GH +  VFW +    L  RC  +NCIW A   G  L+N
Subjt:  SSWKVTILNHQKYA-TLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLFN

Query:  ISQQNYEFQHPWTPG
         +         W  G
Subjt:  ISQQNYEFQHPWTPG

AT4G29035.1 Plant self-incompatibility protein S1 family4.7e-1938.58Show/hide
Query:  ETYSKNDQVPG-SSWKVTILNHQKYA-TLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCI
        +T +++  VP  S W+VT+ N      TL +HCKSK+NDLG   L F   + W F EN+L +TLFWC + S   GH + +VFW +    L  RC+ +NC+
Subjt:  ETYSKNDQVPG-SSWKVTILNHQKYA-TLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCI

Query:  WVADEKGFSLFNISQQNYEFQHPWTPG
        W A   G  L+N +         W  G
Subjt:  WVADEKGFSLFNISQQNYEFQHPWTPG

AT5G06020.1 Plant self-incompatibility protein S1 family2.8e-1133.04Show/hide
Query:  ETYSKNDQ---VPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNC
        ET+ ++ +   + G   ++T+ N+  Y  L +HCKSKD+DLG H+     +Y W+F  N   +TL++C F+  +     F++   E   +   RC  RNC
Subjt:  ETYSKNDQ---VPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNC

Query:  IWVADEKGFSLFNIS
         W A  K  SL+  S
Subjt:  IWVADEKGFSLFNIS

AT5G06030.1 Plant self-incompatibility protein S1 family6.1e-1134.38Show/hide
Query:  GSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGF
        G   +VTI N+  Y  L +HCKS+D+DLG H+L    ++ W+F  N   +TL +C F+  +     F ++      +   RC   NC W A++ GF
Subjt:  GSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAACATATTCCAAGAACGACCAAGTTCCTGGATCATCTTGGAAAGTCACGATTCTTAACCATCAGAAATATGCAACTCTAACGGTTCATTGCAAGTCCAAAGACAA
TGATTTAGGCGTGCATGTCCTTAACTTCAAAGGCGTATATGACTGGCAATTCAAGGAGAATTTGTTGCAGACAACATTGTTTTGGTGCAACTTTAATAGCAGCAAATATG
GGCATGCTTCGTTCGAGGTCTTCTGGCCAGAGAACGGGACGTGGCTTTCCGATCGTTGCAACGATAGAAACTGTATTTGGGTTGCTGATGAAAAGGGTTTTTCCTTGTTT
AATATTTCTCAACAAAATTACGAGTTCCAACATCCGTGGACGCCTGGTAGCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAACATATTCCAAGAACGACCAAGTTCCTGGATCATCTTGGAAAGTCACGATTCTTAACCATCAGAAATATGCAACTCTAACGGTTCATTGCAAGTCCAAAGACAA
TGATTTAGGCGTGCATGTCCTTAACTTCAAAGGCGTATATGACTGGCAATTCAAGGAGAATTTGTTGCAGACAACATTGTTTTGGTGCAACTTTAATAGCAGCAAATATG
GGCATGCTTCGTTCGAGGTCTTCTGGCCAGAGAACGGGACGTGGCTTTCCGATCGTTGCAACGATAGAAACTGTATTTGGGTTGCTGATGAAAAGGGTTTTTCCTTGTTT
AATATTTCTCAACAAAATTACGAGTTCCAACATCCGTGGACGCCTGGTAGCTAA
Protein sequenceShow/hide protein sequence
METYSKNDQVPGSSWKVTILNHQKYATLTVHCKSKDNDLGVHVLNFKGVYDWQFKENLLQTTLFWCNFNSSKYGHASFEVFWPENGTWLSDRCNDRNCIWVADEKGFSLF
NISQQNYEFQHPWTPGS