; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G010790 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G010790
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr05:18378114..18380002
RNA-Seq ExpressionLsi05G010790
SyntenyLsi05G010790
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8651384.1 hypothetical protein Csa_001671 [Cucumis sativus]3.2e-2653.27Show/hide
Query:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNE
        V ILN+ T D LF  CKSKDDDLG Q +   + + WSFKEN   TTL+WC   N + HASF VYWPE R+ WL   C   NCIW+AR+DG YL     N 
Subjt:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNE

Query:  FDFIHAW
        ++ IH W
Subjt:  FDFIHAW

KAE8652336.1 hypothetical protein Csa_021865 [Cucumis sativus]1.9e-2655.14Show/hide
Query:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNE
        V+I N Q +  L THCKSKDDDLG +V+     Y WSFKEN   TTLFWC+F +   HASFEV+WPE +  WLE  C   NC WAA NDGF+L N  + +
Subjt:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNE

Query:  FDFIHAW
        F+F+H W
Subjt:  FDFIHAW

XP_004136434.3 S-protein homolog 1-like [Cucumis sativus]1.2e-2551.4Show/hide
Query:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNE
        + ILN+ T D LF  CKSKDDDLG Q +   + + WSFKEN   TTL+WC   N + HASF V+WPE ++ WL   C   NCIW+AR+DG YL     N 
Subjt:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNE

Query:  FDFIHAW
        F+ IH W
Subjt:  FDFIHAW

XP_004136435.1 S-protein homolog 1-like [Cucumis sativus]3.2e-2653.27Show/hide
Query:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNE
        V ILN+ T D LF  CKSKDDDLG Q +   + + WSFKEN   TTL+WC   N + HASF VYWPE R+ WL   C   NCIW+AR+DG YL     N 
Subjt:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNE

Query:  FDFIHAW
        ++ IH W
Subjt:  FDFIHAW

XP_008458671.1 PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo]3.8e-2755.56Show/hide
Query:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTN-ARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQN
        VTI+N Q N  L  HCKSKDDDLG  V+ N    Y W FKEN+  TT FWCNF++   HASFEV+WPE  T WL + C++SNC+W A NDGF L NG   
Subjt:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTN-ARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQN

Query:  EFDFIHAW
          +F H W
Subjt:  EFDFIHAW

TrEMBL top hitse value%identityAlignment
A0A0A0KA40 S-protein homolog1.1e-2451.82Show/hide
Query:  TVTILNQQTNDPLFTHCKSKDDDLGEQVVTN-ARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHC-TSSNCIWAARNDGFYLFNGM
        TVTI+N Q N  L  HCKSKDDDLG  V+ N    Y W FKEN+  TT +WC+F++   HASFEV+WPER T W  + C ++SNC+W A +DGF L N  
Subjt:  TVTILNQQTNDPLFTHCKSKDDDLGEQVVTN-ARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHC-TSSNCIWAARNDGFYLFNGM

Query:  QNEFDFIHAW
            +F H W
Subjt:  QNEFDFIHAW

A0A1S3C8Z6 S-protein homolog1.8e-2755.56Show/hide
Query:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTN-ARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQN
        VTI+N Q N  L  HCKSKDDDLG  V+ N    Y W FKEN+  TT FWCNF++   HASFEV+WPE  T WL + C++SNC+W A NDGF L NG   
Subjt:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTN-ARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQN

Query:  EFDFIHAW
          +F H W
Subjt:  EFDFIHAW

A0A6J1CQI8 S-protein homolog5.0e-2550Show/hide
Query:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHC---TSSNCIWAARNDGFYLFNGM
        V ++N   N+ L  HCKSKDDDLG Q +     +QWSFK NF GTTLFWCN      + +FEV+WPE R +WL N C   T  +CIW A++DG YL N  
Subjt:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHC---TSSNCIWAARNDGFYLFNGM

Query:  QNEFDFIHAW
         N  + IH W
Subjt:  QNEFDFIHAW

A0A6J1ESA0 S-protein homolog3.6e-2345.79Show/hide
Query:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNE
        V I+N Q+   L  HCKS DDDLG  ++  A  Y W FK N  G+T FWC F +   H SF+V+WPE  ++WL   C   +CIW A+++G YL N  +N 
Subjt:  VTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNE

Query:  FDFIHAW
        F+ IH W
Subjt:  FDFIHAW

A0A6P4ABD6 S-protein homolog1.9e-2452.08Show/hide
Query:  LFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW
        LF HC+SKDDDLGE  +T    + W+F+ NF GTT FWC  R   +HA+F+V+WPE+R  WLE  C    CIW A++DGFYL N   N+ + IH W
Subjt:  LFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 62.2e-0930Show/hide
Query:  MTVTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQ-KHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGM
        +T  ++    +  L  HCKS+DDD G  ++     Y W F  NF  +TL++C F   Q K   F++Y   R +S         NC W A+ DG Y +  +
Subjt:  MTVTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQ-KHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGM

Query:  QNEFDFIHAW
          +    + W
Subjt:  QNEFDFIHAW

F4JLQ5 S-protein homolog 27.7e-1538.53Show/hide
Query:  TVTILNQQTND-PLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQ
        TV I N   N   L  HCKSKDDDLG + +    S+ +SF   F G TL++C+F    +  SF++Y  + R S  +N C S  C+W  R +G   FN   
Subjt:  TVTILNQQTND-PLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQ

Query:  NEFDFIHAW
         +FD  + W
Subjt:  NEFDFIHAW

F4JLS0 S-protein homolog 11.6e-1537.96Show/hide
Query:  VTILN-QQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQN
        VT++N   T + LF HCKSK+DDLGE  +     + W+F EN   +T FWC       H +  V+W +     L + C   NCIW A+ DG YL+N    
Subjt:  VTILN-QQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQN

Query:  EFDFIHAW
        E      W
Subjt:  EFDFIHAW

Q2HQ46 S-protein homolog 745.9e-1537.04Show/hide
Query:  VTILN-QQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQN
        VT+ N   T + LF HCKSK++DLG+  +     + W+F EN   +TLFWC       H + +V+W +     L + C   NC+W A+NDG YL+N    
Subjt:  VTILN-QQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQN

Query:  EFDFIHAW
        E      W
Subjt:  EFDFIHAW

Q9FMQ4 S-protein homolog 31.3e-0932.26Show/hide
Query:  HCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW
        HCKS DDDLG +++    S+ + F+ +  GTTLF+C+F    +   F++Y  +R    + +H +  NCIW     G  +F+   + F+  + W
Subjt:  HCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW

Arabidopsis top hitse value%identityAlignment
AT3G17080.1 Plant self-incompatibility protein S1 family2.6e-1036Show/hide
Query:  PLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDG---FYLFNGMQNEFDFIHAW
        PL  HCKS++DDLG Q +   RS+ + F  +  G TLF+C F    +   F++Y   R   + E  C    C W  R +G   FY   GM   FD  ++W
Subjt:  PLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDG---FYLFNGMQNEFDFIHAW

AT4G16195.1 Plant self-incompatibility protein S1 family5.5e-1638.53Show/hide
Query:  TVTILNQQTND-PLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQ
        TV I N   N   L  HCKSKDDDLG + +    S+ +SF   F G TL++C+F    +  SF++Y  + R S  +N C S  C+W  R +G   FN   
Subjt:  TVTILNQQTND-PLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQ

Query:  NEFDFIHAW
         +FD  + W
Subjt:  NEFDFIHAW

AT4G16295.1 S-protein homologue 11.1e-1637.96Show/hide
Query:  VTILN-QQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQN
        VT++N   T + LF HCKSK+DDLGE  +     + W+F EN   +T FWC       H +  V+W +     L + C   NCIW A+ DG YL+N    
Subjt:  VTILN-QQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQN

Query:  EFDFIHAW
        E      W
Subjt:  EFDFIHAW

AT4G29035.1 Plant self-incompatibility protein S1 family4.2e-1637.04Show/hide
Query:  VTILN-QQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQN
        VT+ N   T + LF HCKSK++DLG+  +     + W+F EN   +TLFWC       H + +V+W +     L + C   NC+W A+NDG YL+N    
Subjt:  VTILN-QQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQN

Query:  EFDFIHAW
        E      W
Subjt:  EFDFIHAW

AT5G12060.1 Plant self-incompatibility protein S1 family9.1e-1132.26Show/hide
Query:  HCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW
        HCKS DDDLG +++    S+ + F+ +  GTTLF+C+F    +   F++Y  +R    + +H +  NCIW     G  +F+   + F+  + W
Subjt:  HCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACCGTGACGATTTTGAACCAACAAACAAATGATCCTCTCTTCACTCATTGCAAGTCCAAAGACGATGATTTAGGTGAGCAAGTCGTCACCAATGCAAGGAGCTACCA
GTGGAGCTTTAAGGAGAATTTTTCTGGAACAACGTTGTTTTGGTGCAACTTTCGCAACACACAAAAACATGCTTCGTTTGAGGTTTATTGGCCAGAGAGACGAACATCAT
GGCTTGAAAATCATTGCACCAGTTCAAACTGTATTTGGGCAGCTAGAAATGATGGCTTTTACTTGTTTAATGGCATGCAAAACGAATTTGACTTCATTCATGCATGGGCA
TAA
mRNA sequenceShow/hide mRNA sequence
ATGACCGTGACGATTTTGAACCAACAAACAAATGATCCTCTCTTCACTCATTGCAAGTCCAAAGACGATGATTTAGGTGAGCAAGTCGTCACCAATGCAAGGAGCTACCA
GTGGAGCTTTAAGGAGAATTTTTCTGGAACAACGTTGTTTTGGTGCAACTTTCGCAACACACAAAAACATGCTTCGTTTGAGGTTTATTGGCCAGAGAGACGAACATCAT
GGCTTGAAAATCATTGCACCAGTTCAAACTGTATTTGGGCAGCTAGAAATGATGGCTTTTACTTGTTTAATGGCATGCAAAACGAATTTGACTTCATTCATGCATGGGCA
TAA
Protein sequenceShow/hide protein sequence
MTVTILNQQTNDPLFTHCKSKDDDLGEQVVTNARSYQWSFKENFSGTTLFWCNFRNTQKHASFEVYWPERRTSWLENHCTSSNCIWAARNDGFYLFNGMQNEFDFIHAWA