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Lsi05G010800 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G010800
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr05:18385227..18389721
RNA-Seq ExpressionLsi05G010800
SyntenyLsi05G010800
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8652336.1 hypothetical protein Csa_021865 [Cucumis sativus]1.0e-1848.35Show/hide
Query:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWE
        DDD    G +V+++   Y W F+ N + TTLFWC+F +   HA+FEVFWPE   WL   C   NC W A N+GF+L N  ++KFEF+H WE
Subjt:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWE

XP_008458671.1 PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo]6.4e-2154.95Show/hide
Query:  DDDSNFWGEQVI-NIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW
        DDD    G  VI N G+ Y W F+ N+  TT FWCNF++   HA+FEVFWPE   WLSD C++SNC+WVA N+GF L NG  K  EF H W
Subjt:  DDDSNFWGEQVI-NIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW

XP_022137291.1 S-protein homolog 1-like [Momordica charantia]8.7e-1851.09Show/hide
Query:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAK-NEGFYLFNGSQKKFEFVHAWE
        DDD    GE VI     YEWKF+ NF+ TTLFWCNF++   HA+ EVFWPE   WL+  C  SNCIWVA+ ++G YL +  Q+ FE  + W+
Subjt:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAK-NEGFYLFNGSQKKFEFVHAWE

XP_022931007.1 S-protein homolog 1-like [Cucurbita moschata]3.0e-1845.65Show/hide
Query:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEA-WLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWE
        DDD    G  +I +   Y+WKF+VN +G+T FWC F ++  H +F+VFWPE ++ WL + C   +CIWVAK+EG YL N  +  FE +H W+
Subjt:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEA-WLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWE

XP_038907112.1 S-protein homolog 74-like [Benincasa hispida]1.4e-2056.04Show/hide
Query:  DDDSNFWGEQVI-NIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW
        DDD    G  VI N G+ Y W F+ NF  TT FWCNF++   HA+FEVFWPE+  WLSD C DSNC+WVA N+GF L N   K  EF H W
Subjt:  DDDSNFWGEQVI-NIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW

TrEMBL top hitse value%identityAlignment
A0A1S3C8Z6 S-protein homolog3.1e-2154.95Show/hide
Query:  DDDSNFWGEQVI-NIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW
        DDD    G  VI N G+ Y W F+ N+  TT FWCNF++   HA+FEVFWPE   WLSD C++SNC+WVA N+GF L NG  K  EF H W
Subjt:  DDDSNFWGEQVI-NIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW

A0A6J1C659 S-protein homolog4.2e-1851.09Show/hide
Query:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAK-NEGFYLFNGSQKKFEFVHAWE
        DDD    GE VI     YEWKF+ NF+ TTLFWCNF++   HA+ EVFWPE   WL+  C  SNCIWVA+ ++G YL +  Q+ FE  + W+
Subjt:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAK-NEGFYLFNGSQKKFEFVHAWE

A0A6J1ESA0 S-protein homolog1.4e-1845.65Show/hide
Query:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEA-WLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWE
        DDD    G  +I +   Y+WKF+VN +G+T FWC F ++  H +F+VFWPE ++ WL + C   +CIWVAK+EG YL N  +  FE +H W+
Subjt:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEA-WLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWE

A0A6P4ACY4 S-protein homolog3.6e-1744.09Show/hide
Query:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG
        DDD    GE  + +G+ + W FR NFF TTL+WC    + +HA F V+W   + WL D C + +CIW AK++GFYL N  + + E +H WE G
Subjt:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG

A0A6P4B1H1 S-protein homolog4.2e-1844.09Show/hide
Query:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG
        DDD    GE  + +G+ + W F+ NFFGTTL+WC+   + +HA F V+W   + WL D C + +CIW AK++GFYL N  + + E +H WE G
Subjt:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 63.2e-0734.07Show/hide
Query:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQ-KHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW
        DDD  F    ++  G +Y W F VNF  +TL++C F  EQ K   F+++    +   S  C   NC W AK +G Y +    KK    + W
Subjt:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQ-KHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW

F4JLQ5 S-protein homolog 22.1e-0625.56Show/hide
Query:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW
        DDD    G + +  G+ + + F   FFG TL++C+F    +  +F+++    ++   + C    C+W  +  G   FN   K+F+  + W
Subjt:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW

F4JLS0 S-protein homolog 17.7e-0932.56Show/hide
Query:  GEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG
        GE  +     + W F  N   +T FWC    +  H    VFW   +  L   C   NCIW AK +G YL+N +  +      WE G
Subjt:  GEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG

P0DN92 S-protein homolog 241.4e-0529.67Show/hide
Query:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNF-RNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW
        DDD  F    ++  G+++ WKF VNF  +TL++C F + + K   FE++    + +    C  +NC W A+ +G Y ++    K    + W
Subjt:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNF-RNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW

Q2HQ46 S-protein homolog 742.0e-0935.53Show/hide
Query:  YEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG
        + W F  N   +TLFWC    +  H   +VFW   +  L   C   NC+W AKN+G YL+N +  +      W+SG
Subjt:  YEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG

Arabidopsis top hitse value%identityAlignment
AT1G28305.1 Plant self-incompatibility protein S1 family4.3e-0730.95Show/hide
Query:  GEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWE
        G+  +  GK+Y++  R NF+ TTLFWC FR+   + T + F  +   +           W A+ +G Y F  +Q     VH W+
Subjt:  GEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWE

AT4G16195.1 Plant self-incompatibility protein S1 family1.5e-0725.56Show/hide
Query:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW
        DDD    G + +  G+ + + F   FFG TL++C+F    +  +F+++    ++   + C    C+W  +  G   FN   K+F+  + W
Subjt:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW

AT4G16295.1 S-protein homologue 15.5e-1032.56Show/hide
Query:  GEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG
        GE  +     + W F  N   +T FWC    +  H    VFW   +  L   C   NCIW AK +G YL+N +  +      WE G
Subjt:  GEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG

AT4G29035.1 Plant self-incompatibility protein S1 family1.4e-1035.53Show/hide
Query:  YEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG
        + W F  N   +TLFWC    +  H   +VFW   +  L   C   NC+W AKN+G YL+N +  +      W+SG
Subjt:  YEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESG

AT5G06020.1 Plant self-incompatibility protein S1 family2.4e-0528.57Show/hide
Query:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNF-RNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW
        DDD  F    +   G++Y WKF VNF  +TL++C F + +     F++   E + +    C   NC W AK +  Y ++   +   +   W
Subjt:  DDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNF-RNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATACAACAAATACAATGGATGATGATTCTAACTTTTGGGGTGAGCAAGTCATCAACATTGGAAAGGTATACGAGTGGAAATTCAGGGTGAATTTTTTTGGAACGAC
GTTGTTTTGGTGCAACTTTCGCAATGAACAAAAACATGCAACATTTGAAGTTTTTTGGCCAGAGGCAGAAGCATGGCTTTCAGATCATTGCACAGATTCAAATTGCATAT
GGGTAGCTAAAAATGAGGGCTTTTACTTGTTTAATGGCTCTCAAAAGAAATTCGAGTTCGTTCATGCATGGGAATCTGGTACTTCTTAG
mRNA sequenceShow/hide mRNA sequence
ATGGATACAACAAATACAATGGATGATGATTCTAACTTTTGGGGTGAGCAAGTCATCAACATTGGAAAGGTATACGAGTGGAAATTCAGGGTGAATTTTTTTGGAACGAC
GTTGTTTTGGTGCAACTTTCGCAATGAACAAAAACATGCAACATTTGAAGTTTTTTGGCCAGAGGCAGAAGCATGGCTTTCAGATCATTGCACAGATTCAAATTGCATAT
GGGTAGCTAAAAATGAGGGCTTTTACTTGTTTAATGGCTCTCAAAAGAAATTCGAGTTCGTTCATGCATGGGAATCTGGTACTTCTTAG
Protein sequenceShow/hide protein sequence
MDTTNTMDDDSNFWGEQVINIGKVYEWKFRVNFFGTTLFWCNFRNEQKHATFEVFWPEAEAWLSDHCTDSNCIWVAKNEGFYLFNGSQKKFEFVHAWESGTS