; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G010810 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G010810
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr05:18390674..18394264
RNA-Seq ExpressionLsi05G010810
SyntenyLsi05G010810
Gene Ontology termsGO:0009987 - cellular process (biological process)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650821.1 hypothetical protein Csa_017644 [Cucumis sativus]2.5e-4171.3Show/hide
Query:  MSSSKKQGVDSKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVAT
        +  S  Q  +S W VTIYN QTN+TL AHCKSKDDDLG H+INIKGQY W FKENFWQTTL+WCNFSSLNGHASFEVFWPE+ +WLESRC    CKWVAT
Subjt:  MSSSKKQGVDSKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVAT

Query:  NEGFSLAN
        +EG  +++
Subjt:  NEGFSLAN

KAE8652336.1 hypothetical protein Csa_021865 [Cucumis sativus]7.4e-4672.97Show/hide
Query:  SSSKKQGVDSKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATN
        + SKKQGV S W V+I+N+Q +ATLL HCKSKDDDLGA ++++KGQY+WSFKEN WQTTL+WC+FSSLNGHASFEVFWPE+G+WLE RC+Y NC W ATN
Subjt:  SSSKKQGVDSKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATN

Query:  EGFSLANIPEQ
        +GF LANIPE+
Subjt:  EGFSLANIPEQ

XP_008458671.1 PREDICTED: uncharacterized protein LOC103498000 [Cucumis melo]3.2e-3363.89Show/hide
Query:  SKKQGVDSKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQ-YNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNE
        SK Q   + WQVTI NYQ NA+L  HCKSKDDDLG H+I  +G+ Y+W FKEN+ QTT +WCNF S  GHASFEVFWPE G WL  RC+  NC WVA+N+
Subjt:  SKKQGVDSKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQ-YNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNE

Query:  GFSLANIP
        GFSL N P
Subjt:  GFSLANIP

XP_022137291.1 S-protein homolog 1-like [Momordica charantia]3.2e-3359.46Show/hide
Query:  SKKQGVDSKWQVTIYNY-QTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVAT-N
        S +Q   S WQVTI NY + +A L  HCKSKDDDLG H+I  +G+Y W FKENFWQTTL+WCNF S+ GHAS EVFWPE+ DWL  RC++ NC WVA  +
Subjt:  SKKQGVDSKWQVTIYNY-QTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVAT-N

Query:  EGFSLANIPEQ
        +G  LA++P++
Subjt:  EGFSLANIPEQ

XP_038907112.1 S-protein homolog 74-like [Benincasa hispida]7.7e-3566.67Show/hide
Query:  SKKQGVDSKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQ-YNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNE
        SK Q   + WQVTI NYQ NA L  HCKSKDDDLG H+I  +G+ YNW FKENF QTT +WCNF S  GHASFEVFWPE G WL  RC+  NC WVA N+
Subjt:  SKKQGVDSKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQ-YNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNE

Query:  GFSLANIP
        GFSL NIP
Subjt:  GFSLANIP

TrEMBL top hitse value%identityAlignment
A0A0A0KA40 S-protein homolog2.5e-3161.47Show/hide
Query:  SKKQGVDSKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQ-YNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRC-NYENCKWVATN
        SK Q   + W VTI NYQ NA+L  HCKSKDDDLG H+I  +G+ Y+W FKEN+ QTT YWC+F S  GHASFEVFWPERG W   RC +  NC WVA +
Subjt:  SKKQGVDSKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQ-YNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRC-NYENCKWVATN

Query:  EGFSLANIP
        +GFSL N P
Subjt:  EGFSLANIP

A0A1S3C8Z6 S-protein homolog1.6e-3363.89Show/hide
Query:  SKKQGVDSKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQ-YNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNE
        SK Q   + WQVTI NYQ NA+L  HCKSKDDDLG H+I  +G+ Y+W FKEN+ QTT +WCNF S  GHASFEVFWPE G WL  RC+  NC WVA+N+
Subjt:  SKKQGVDSKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQ-YNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNE

Query:  GFSLANIP
        GFSL N P
Subjt:  GFSLANIP

A0A6J1C659 S-protein homolog1.6e-3359.46Show/hide
Query:  SKKQGVDSKWQVTIYNY-QTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVAT-N
        S +Q   S WQVTI NY + +A L  HCKSKDDDLG H+I  +G+Y W FKENFWQTTL+WCNF S+ GHAS EVFWPE+ DWL  RC++ NC WVA  +
Subjt:  SKKQGVDSKWQVTIYNY-QTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVAT-N

Query:  EGFSLANIPEQ
        +G  LA++P++
Subjt:  EGFSLANIPEQ

A0A6J1GSD6 S-protein homolog5.4e-2656.25Show/hide
Query:  SKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNEGFSL
        S W+V I N   ++TL+ HCKSKDDDLG H+I    +Y W F EN  QTTLYWCNFSS  G AS +VFWPE+  WL  RCN   C WVA ++G S+
Subjt:  SKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNEGFSL

A0A6J1GSZ3 S-protein homolog3.2e-2657.29Show/hide
Query:  SKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNEGFSL
        S W+V I N   ++TL+AHCKSKDDDLG H+I    +Y W F EN  QTTLYWCNFSS  G AS +VFWPE+  WL  RCN   C WVA ++G S+
Subjt:  SKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNEGFSL

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 68.1e-1137.14Show/hide
Query:  QVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLN-GHASFEVFWPERGDWLESRCNYENCKWVATNEG-FSLANIPE
        +V IYN   +  L  HCKS+DDD G H++   G Y W F  NF  +TLY+C FS        F+++   R     SRC   NC W A  +G +    IP+
Subjt:  QVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLN-GHASFEVFWPERGDWLESRCNYENCKWVATNEG-FSLANIPE

Query:  QNTIW
        +N ++
Subjt:  QNTIW

F4JLQ5 S-protein homolog 22.3e-1036.89Show/hide
Query:  SSSKKQGVDSKWQVTIYNYQTN-ATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVAT
        SS+      SK  V I N   N  TLL HCKSKDDDLG   +     +++SF   F+  TLY+C+FS  N   SF+++   R    +++C  + C W   
Subjt:  SSSKKQGVDSKWQVTIYNYQTN-ATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVAT

Query:  NEG
          G
Subjt:  NEG

F4JLS0 S-protein homolog 11.5e-1741.41Show/hide
Query:  SKWQVTIYN-YQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNEGFSLAN
        S+WQVT+ N   T  TL  HCKSK+DDLG   +  + +++W+F EN   +T +WC  +  NGH +  VFW +    L  RC ++NC W A  +G  L N
Subjt:  SKWQVTIYN-YQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNEGFSLAN

O23020 S-protein homolog 53.1e-1035.44Show/hide
Query:  VTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYE
        VT+ N      L  HCKSK DDLG H++  K +Y++ F+ N W++TL++C+F   +   SF+++  +R   +   C +E
Subjt:  VTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYE

Q2HQ46 S-protein homolog 742.0e-1742.42Show/hide
Query:  SKWQVTIYN-YQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNEGFSLAN
        S+WQVT+ N   T  TL  HCKSK++DLG   +    +++W+F EN   +TL+WC  S  +GH + +VFW +    L  RC+++NC W A N+G  L N
Subjt:  SKWQVTIYN-YQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNEGFSLAN

Arabidopsis top hitse value%identityAlignment
AT1G04645.1 Plant self-incompatibility protein S1 family2.2e-1135.44Show/hide
Query:  VTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYE
        VT+ N      L  HCKSK DDLG H++  K +Y++ F+ N W++TL++C+F   +   SF+++  +R   +   C +E
Subjt:  VTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYE

AT4G16195.1 Plant self-incompatibility protein S1 family1.7e-1136.89Show/hide
Query:  SSSKKQGVDSKWQVTIYNYQTN-ATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVAT
        SS+      SK  V I N   N  TLL HCKSKDDDLG   +     +++SF   F+  TLY+C+FS  N   SF+++   R    +++C  + C W   
Subjt:  SSSKKQGVDSKWQVTIYNYQTN-ATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVAT

Query:  NEG
          G
Subjt:  NEG

AT4G16295.1 S-protein homologue 11.1e-1841.41Show/hide
Query:  SKWQVTIYN-YQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNEGFSLAN
        S+WQVT+ N   T  TL  HCKSK+DDLG   +  + +++W+F EN   +T +WC  +  NGH +  VFW +    L  RC ++NC W A  +G  L N
Subjt:  SKWQVTIYN-YQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNEGFSLAN

AT4G29035.1 Plant self-incompatibility protein S1 family1.4e-1842.42Show/hide
Query:  SKWQVTIYN-YQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNEGFSLAN
        S+WQVT+ N   T  TL  HCKSK++DLG   +    +++W+F EN   +TL+WC  S  +GH + +VFW +    L  RC+++NC W A N+G  L N
Subjt:  SKWQVTIYN-YQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNEGFSLAN

AT5G04350.1 Plant self-incompatibility protein S1 family1.4e-1033.02Show/hide
Query:  QVTIYNYQTNATLL-AHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWC------NFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNEG--F
        +V + N   ++ LL  HC+SKDDDLG H++ I   Y ++F +N WQTT + C      NF       ++E  W        S+    +CKW+   +G  F
Subjt:  QVTIYNYQTNATLL-AHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWC------NFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNEG--F

Query:  SLANIP
        S   +P
Subjt:  SLANIP


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAAGCTCCAAGAAACAAGGAGTAGATTCCAAATGGCAAGTGACAATTTACAATTATCAAACAAATGCAACTCTATTGGCTCATTGCAAATCAAAAGACGACGATTT
GGGTGCGCATCTGATCAACATTAAAGGTCAATATAATTGGAGTTTCAAAGAAAATTTTTGGCAAACAACATTGTATTGGTGCAATTTTAGTAGTTTGAATGGACATGCTT
CATTTGAGGTTTTTTGGCCAGAGAGAGGGGATTGGCTTGAATCAAGATGTAACTATGAAAATTGCAAGTGGGTAGCTACTAATGAGGGATTTTCCTTGGCAAATATTCCT
GAACAGAATACAATATGGGTGGGTGGGAGGAATTGGACACAAACCACTTCGTGGTCAACACAATAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAAGCTCCAAGAAACAAGGAGTAGATTCCAAATGGCAAGTGACAATTTACAATTATCAAACAAATGCAACTCTATTGGCTCATTGCAAATCAAAAGACGACGATTT
GGGTGCGCATCTGATCAACATTAAAGGTCAATATAATTGGAGTTTCAAAGAAAATTTTTGGCAAACAACATTGTATTGGTGCAATTTTAGTAGTTTGAATGGACATGCTT
CATTTGAGGTTTTTTGGCCAGAGAGAGGGGATTGGCTTGAATCAAGATGTAACTATGAAAATTGCAAGTGGGTAGCTACTAATGAGGGATTTTCCTTGGCAAATATTCCT
GAACAGAATACAATATGGGTGGGTGGGAGGAATTGGACACAAACCACTTCGTGGTCAACACAATAA
Protein sequenceShow/hide protein sequence
MSSSKKQGVDSKWQVTIYNYQTNATLLAHCKSKDDDLGAHLINIKGQYNWSFKENFWQTTLYWCNFSSLNGHASFEVFWPERGDWLESRCNYENCKWVATNEGFSLANIP
EQNTIWVGGRNWTQTTSWSTQ