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Lsi05G010860 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G010860
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr05:18532323..18537227
RNA-Seq ExpressionLsi05G010860
SyntenyLsi05G010860
Gene Ontology termsNA
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8650840.1 hypothetical protein Csa_017632 [Cucumis sativus]1.3e-5178.23Show/hide
Query:  LLVLALLMVIETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYR
        L++ +LL+VI+TS GAP E W V+V NEMQ GQ+L L CKSK+DD GKQ LK GQ FSWKFRENLWQNTLYWCYM NDHNHVSLEVFWPE+AS+ +L+YR
Subjt:  LLVLALLMVIETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYR

Query:  CRDNVCYWSARNDGIYIYNVPENK
        CRDNVCYWSARNDGIYIYNVPENK
Subjt:  CRDNVCYWSARNDGIYIYNVPENK

KGN60342.2 hypothetical protein Csa_002569, partial [Cucumis sativus]1.3e-2751.61Show/hide
Query:  LVLALLMVIETSLGA--PFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAY
        ++LAL+       GA  P   W++ + NEM    TL+L+CKSK+DDLG Q L   Q+FSW F+ENLWQ TLYWCYM N  +H S  VFWPE +   WLA+
Subjt:  LVLALLMVIETSLGA--PFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAY

Query:  RCRDNVCYWSARNDGIYIYNVPEN
        RC+   C WSAR+DGIY+   P N
Subjt:  RCRDNVCYWSARNDGIYIYNVPEN

PQP91987.1 uncharacterized protein Pyn_22176 [Prunus yedoensis var. nudiflora]3.8e-2748.7Show/hide
Query:  IETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWS
        +E ++G  F+RW V V N +  G+TL+  CKSK+DDLG++ L  G +F+W F+E+ + +TLYWCYM     H +L+VFW ES   SWL YRC    C W 
Subjt:  IETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWS

Query:  ARNDGIYIYNVPENK
        A++DGIYI  +PEN+
Subjt:  ARNDGIYIYNVPENK

XP_004136434.3 S-protein homolog 1-like [Cucumis sativus]1.3e-2751.61Show/hide
Query:  LVLALLMVIETSLGA--PFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAY
        ++LAL+       GA  P   W++ + NEM    TL+L+CKSK+DDLG Q L   Q+FSW F+ENLWQ TLYWCYM N  +H S  VFWPE +   WLA+
Subjt:  LVLALLMVIETSLGA--PFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAY

Query:  RCRDNVCYWSARNDGIYIYNVPEN
        RC+   C WSAR+DGIY+   P N
Subjt:  RCRDNVCYWSARNDGIYIYNVPEN

XP_021806080.1 S-protein homolog 1-like [Prunus avium]4.9e-2749.12Show/hide
Query:  ETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSA
        E ++G  F+RW V V N +  G+TL+  CKSK+DDLG++ L  G +F+W F+E+ + +TLYWCYM     H +L+VFW ES   SWL YRC    C W A
Subjt:  ETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSA

Query:  RNDGIYIYNVPENK
        ++DGIYI  +PEN+
Subjt:  RNDGIYIYNVPENK

TrEMBL top hitse value%identityAlignment
A0A251N118 S-protein homolog1.5e-2646.77Show/hide
Query:  LALLMVIETSLGAP---FERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYR
        +A+L +    LG+P   + +W V V N +  G+TL+  CKSK+DDLG++ L  G +F+W F+EN +  TLYWCYM  D  H +L+VFW E    SWL YR
Subjt:  LALLMVIETSLGAP---FERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYR

Query:  CRDNVCYWSARNDGIYIYNVPENK
        C    C W A++DGIYI  +PEN+
Subjt:  CRDNVCYWSARNDGIYIYNVPENK

A0A314XMI1 S-protein homolog1.8e-2748.7Show/hide
Query:  IETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWS
        +E ++G  F+RW V V N +  G+TL+  CKSK+DDLG++ L  G +F+W F+E+ + +TLYWCYM     H +L+VFW ES   SWL YRC    C W 
Subjt:  IETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWS

Query:  ARNDGIYIYNVPENK
        A++DGIYI  +PEN+
Subjt:  ARNDGIYIYNVPENK

A0A314ZRK3 S-protein homolog9.1e-2749.12Show/hide
Query:  ETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSA
        E ++G  F+RW V V N +  G+TL   CKSK+DDLG++ L  G +F+W F+E+ + +TLYWCYM     H +L+VFW ES   SWL YRC    C W A
Subjt:  ETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSA

Query:  RNDGIYIYNVPENK
        ++DGIYI  +PEN+
Subjt:  RNDGIYIYNVPENK

A0A5E4EJG4 S-protein homolog2.6e-2646.4Show/hide
Query:  LALLMVIETSLGAP----FERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAY
        +A+L +    LG+P    +  W V V N +  G+TL+  CKSK+DDLG++ L  G +F+W F+EN +  TLYWCYM  D  H +L+VFW E    SWL Y
Subjt:  LALLMVIETSLGAP----FERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAY

Query:  RCRDNVCYWSARNDGIYIYNVPENK
        RC    C W A++DGIYI  +PEN+
Subjt:  RCRDNVCYWSARNDGIYIYNVPENK

A0A6P5RMF3 S-protein homolog2.4e-2749.12Show/hide
Query:  ETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSA
        E ++G  F+RW V V N +  G+TL+  CKSK+DDLG++ L  G +F+W F+E+ + +TLYWCYM     H +L+VFW ES   SWL YRC    C W A
Subjt:  ETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSA

Query:  RNDGIYIYNVPENK
        ++DGIYI  +PEN+
Subjt:  RNDGIYIYNVPENK

SwissProt top hitse value%identityAlignment
F4JLQ5 S-protein homolog 23.1e-0828.81Show/hide
Query:  PFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIY
        P  +  VE+ N++ N  TL   CKSK+DDLG + L+ G+ +S+ F    +  TLY+C     +   S +++  +    S    +C  + C W  R +G  
Subjt:  PFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIY

Query:  IYNVPENKTTARYDFASP
         +    N  T ++D   P
Subjt:  IYNVPENKTTARYDFASP

F4JLS0 S-protein homolog 13.8e-2244.44Show/hide
Query:  WRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN
        W+V V N +  G+TL++ CKSKEDDLG+  LK   +FSW F EN+  +T +WCYM  D+ H+++ VFW +      L +RC    C W+A+ DG+Y++N
Subjt:  WRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN

P0DN92 S-protein homolog 242.4e-0837.76Show/hide
Query:  RVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN
        RV + N+  N   L + CKS++DDLG   L  G+ F WKF  N   +TLY+C        +   VF    A++ +  YRC +  C W A  DGIY Y+
Subjt:  RVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN

Q2HQ46 S-protein homolog 741.7e-2246.46Show/hide
Query:  WRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN
        W+V VAN +  G+TL++ CKSKE+DLG   LK   +FSW F EN+  +TL+WCYM  D  H++++VFW +      L +RC    C W+A+NDG+Y++N
Subjt:  WRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN

Q9FI84 S-protein homolog 271.7e-0937.14Show/hide
Query:  RVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIY-NV
        R+ V N   N   L + CKSK+DDLG    K G+ + WKF  N   +TLY+C      ++    VF  + A + +  YRCR+  C W+A+ D +Y Y N+
Subjt:  RVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIY-NV

Query:  PENKT
        P+  T
Subjt:  PENKT

Arabidopsis top hitse value%identityAlignment
AT4G16295.1 S-protein homologue 12.7e-2344.44Show/hide
Query:  WRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN
        W+V V N +  G+TL++ CKSKEDDLG+  LK   +FSW F EN+  +T +WCYM  D+ H+++ VFW +      L +RC    C W+A+ DG+Y++N
Subjt:  WRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN

AT4G29035.1 Plant self-incompatibility protein S1 family1.2e-2346.46Show/hide
Query:  WRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN
        W+V VAN +  G+TL++ CKSKE+DLG   LK   +FSW F EN+  +TL+WCYM  D  H++++VFW +      L +RC    C W+A+NDG+Y++N
Subjt:  WRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIYN

AT5G04347.1 Plant self-incompatibility protein S1 family2.0e-1032.74Show/hide
Query:  VANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHN---HVSLEVF---WPESASQSWLAYRCRDNVCYWSARNDGIYIY
        V NE+ N + L +RC+SK+D+LG   L+ GQ     F +N+W+ TL+WC +    +   HV+ + +   W       +L          W AR DGIY  
Subjt:  VANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHN---HVSLEVF---WPESASQSWLAYRCRDNVCYWSARNDGIYIY

Query:  NVPENKTTARYDF
          PE     +YD+
Subjt:  NVPENKTTARYDF

AT5G04350.1 Plant self-incompatibility protein S1 family9.0e-1132.67Show/hide
Query:  RVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHN------HVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGI
        +V ++N++++ + L + C+SK+DDLG+  LK GQ + + F +N+WQ T + C M    N       V+ E  W ++   S          C W  R DGI
Subjt:  RVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHN------HVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGI

Query:  Y
        Y
Subjt:  Y

AT5G06020.1 Plant self-incompatibility protein S1 family1.2e-1037.14Show/hide
Query:  RVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIY-NV
        R+ V N   N   L + CKSK+DDLG    K G+ + WKF  N   +TLY+C      ++    VF  + A + +  YRCR+  C W+A+ D +Y Y N+
Subjt:  RVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYWSARNDGIYIY-NV

Query:  PENKT
        P+  T
Subjt:  PENKT


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAACTTTTGGTTTTGGCATTGTTGATGGTTATTGAAACAAGCCTTGGAGCTCCATTTGAGCGTTGGAGAGTTGAAGTAGCCAATGAAATGCAAAATGGGCAAACTTT
ATATCTTCGGTGCAAGTCCAAAGAAGATGATTTGGGAAAGCAATATTTAAAACATGGGCAGAAATTTTCATGGAAATTTAGAGAGAATTTGTGGCAAAATACACTTTATT
GGTGCTACATGAGAAATGATCACAATCATGTATCTTTAGAAGTGTTTTGGCCAGAATCAGCTTCTCAGTCTTGGCTTGCTTATAGATGTAGAGATAATGTTTGCTATTGG
TCAGCAAGAAATGATGGAATTTACATCTATAATGTTCCTGAAAATAAAACCACTGCCAGATATGATTTTGCTTCCCCTTCGTACTACCGAGATTCTTGCTCGACTTTCTT
TCGACTTAAGAAGGCAGCGGTGAGAATGATGATCACTTCGGAACTCGTTGAGAATGGGCATTTTAGGGCTGGATCTAAAAGCTCTCCAACGTGTTGCGATATATCATTAA
TTGAGATGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAAACTTTTGGTTTTGGCATTGTTGATGGTTATTGAAACAAGCCTTGGAGCTCCATTTGAGCGTTGGAGAGTTGAAGTAGCCAATGAAATGCAAAATGGGCAAACTTT
ATATCTTCGGTGCAAGTCCAAAGAAGATGATTTGGGAAAGCAATATTTAAAACATGGGCAGAAATTTTCATGGAAATTTAGAGAGAATTTGTGGCAAAATACACTTTATT
GGTGCTACATGAGAAATGATCACAATCATGTATCTTTAGAAGTGTTTTGGCCAGAATCAGCTTCTCAGTCTTGGCTTGCTTATAGATGTAGAGATAATGTTTGCTATTGG
TCAGCAAGAAATGATGGAATTTACATCTATAATGTTCCTGAAAATAAAACCACTGCCAGATATGATTTTGCTTCCCCTTCGTACTACCGAGATTCTTGCTCGACTTTCTT
TCGACTTAAGAAGGCAGCGGTGAGAATGATGATCACTTCGGAACTCGTTGAGAATGGGCATTTTAGGGCTGGATCTAAAAGCTCTCCAACGTGTTGCGATATATCATTAA
TTGAGATGTAA
Protein sequenceShow/hide protein sequence
MKLLVLALLMVIETSLGAPFERWRVEVANEMQNGQTLYLRCKSKEDDLGKQYLKHGQKFSWKFRENLWQNTLYWCYMRNDHNHVSLEVFWPESASQSWLAYRCRDNVCYW
SARNDGIYIYNVPENKTTARYDFASPSYYRDSCSTFFRLKKAAVRMMITSELVENGHFRAGSKSSPTCCDISLIEM