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Lsi05G010890 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G010890
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionS-protein homolog
Genome locationchr05:18665879..18666208
RNA-Seq ExpressionLsi05G010890
SyntenyLsi05G010890
Gene Ontology termsGO:0060320 - rejection of self pollen (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR010264 - Plant self-incompatibility S1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAE8646231.1 hypothetical protein Csa_023825, partial [Cucumis sativus]6.2e-4679.05Show/hide
Query:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDN-TAQKDVL
        LSNGQIL  HCKSKDNDLG  +L  GTEFNWRFRVNFWNTTLFWCYLQKPN QH SFE+FWIES S+WLY MC++ NCIW AKDDGIYLKDN    KD+L
Subjt:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDN-TAQKDVL

Query:  IHKWE
        IHKWE
Subjt:  IHKWE

XP_022143772.1 S-protein homolog 74-like [Momordica charantia]6.0e-4169.23Show/hide
Query:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI
        LSNGQ L VHCKSKDNDLG H L+ GTEFNW FRVN WNTTLFWCYL KP+ +  SF+ FW+E  SIWL+  CY SNCIW AKDDGIYL+DN  Q+D+L+
Subjt:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI

Query:  HKWE
        H+W+
Subjt:  HKWE

XP_031745090.1 S-protein homolog 1-like [Cucumis sativus]6.2e-4679.05Show/hide
Query:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDN-TAQKDVL
        LSNGQIL  HCKSKDNDLG  +L  GTEFNWRFRVNFWNTTLFWCYLQKPN QH SFE+FWIES S+WLY MC++ NCIW AKDDGIYLKDN    KD+L
Subjt:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDN-TAQKDVL

Query:  IHKWE
        IHKWE
Subjt:  IHKWE

XP_038896421.1 S-protein homolog 1-like [Benincasa hispida]2.3e-4076.92Show/hide
Query:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI
        LS+GQILSVHCKSKD+DLG HKLSVGTEFNW FR              KPNAQH SFEAFWIES S+WLYNMCYDSNCIW AKDDGIYLKDNTAQ+D+LI
Subjt:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI

Query:  HKWE
        HKWE
Subjt:  HKWE

XP_038896594.1 S-protein homolog 1-like [Benincasa hispida]1.8e-5390.38Show/hide
Query:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI
        LSNGQIL VHCKSKDNDLG HKLSVG EFNWRFRVNFWNTTLFWCYLQKPNAQH SF+AFWIESTS+WLYNMCYDSNCIWIAKDDG+YLKDNT  +DVLI
Subjt:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI

Query:  HKWE
        HKWE
Subjt:  HKWE

TrEMBL top hitse value%identityAlignment
A0A1S4E390 S-protein homolog3.2e-4070.87Show/hide
Query:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI
        LSN Q L VHC+SKD+DLG   LSVGTEFNW F++NFW+TTLFWCYLQKPNA+  SFEAFW+E  SIWL+  C+ SNCIW AKDDGIYLKDN A +D L+
Subjt:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI

Query:  HKW
        H W
Subjt:  HKW

A0A6J1CPR8 S-protein homolog1.2e-3969.9Show/hide
Query:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI
        LSN Q+L VHCKSK++DLG H LSVGTEFNWRFRVN W+TTL+WCYLQKPN Q  SF+AFW+E  SIWLY  C +SNC W AKDDGIYL++N   +DV +
Subjt:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI

Query:  HKW
        HKW
Subjt:  HKW

A0A6J1CQH6 S-protein homolog1.5e-3764.42Show/hide
Query:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI
        L NG++L VHCKS+D+DLG   L  G EF+W FRVN  +TTLFWC+L+KP+AQ  SF+AFW+E TSIWL+  CYD+NCIW AKDDG+YL+DN  Q+DVL+
Subjt:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI

Query:  HKWE
        HKW+
Subjt:  HKWE

A0A6J1CRU0 S-protein homolog2.9e-4169.23Show/hide
Query:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI
        LSNGQ L VHCKSKDNDLG H L+ GTEFNW FRVN WNTTLFWCYL KP+ +  SF+ FW+E  SIWL+  CY SNCIW AKDDGIYL+DN  Q+D+L+
Subjt:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI

Query:  HKWE
        H+W+
Subjt:  HKWE

A0A6J1HAC3 S-protein homolog1.1e-3258.65Show/hide
Query:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI
        LSNGQ + VHCKSKDNDLG H L+ GTEF W F+VNFW+TTLFWCYL+KPN    +F+AFW+E  + WL   C  + C W A+D+GIYLKDN+   D  +
Subjt:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI

Query:  HKWE
        H W+
Subjt:  HKWE

SwissProt top hitse value%identityAlignment
F2Q9V4 S-protein homolog 62.5e-1337.14Show/hide
Query:  NGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDS----NCIWIAKDDGIYLKDNTAQKDV
        N  +L VHCKS+D+D G H L  G  + W F VNF N+TL++C   +   +   F+          +Y    DS    NC W AK+DGIY      +K+ 
Subjt:  NGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDS----NCIWIAKDDGIYLKDNTAQKDV

Query:  LIHKW
        L +KW
Subjt:  LIHKW

F4JLS0 S-protein homolog 14.6e-2042.31Show/hide
Query:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI
        L+ G+ L +HCKSK++DLG   L     F+W F  N  ++T FWCY+ K N  H +   FW     + L++ C   NCIW AK DG+YL ++ + +DVL 
Subjt:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI

Query:  HKWE
         KWE
Subjt:  HKWE

P0DN92 S-protein homolog 242.1e-1235.64Show/hide
Query:  NGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLIHK
        N  +L +HCKS+D+DLG H L+ G  F W+F VNF  +TL++C   +   +   FE +         +  C  +NC W A+ DGIY       K  L + 
Subjt:  NGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLIHK

Query:  W
        W
Subjt:  W

Q2HQ46 S-protein homolog 741.3e-1941.35Show/hide
Query:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI
        L+ G+ L +HCKSK+NDLG   L     F+W F  N  ++TLFWCY+ K +  H + + FW     + L++ C   NC+W AK+DG+YL ++   +DVL 
Subjt:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI

Query:  HKWE
         KW+
Subjt:  HKWE

Q9LW22 S-protein homolog 211.0e-1140.66Show/hide
Query:  NGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQK-PNAQH----KSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIY
        N  IL VHCKSK+ND+GV  L +G   ++ F+ NFW TT FWC L K P+ +      +++A  + +     YN        W+A+DDGIY
Subjt:  NGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQK-PNAQH----KSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIY

Arabidopsis top hitse value%identityAlignment
AT3G26880.1 Plant self-incompatibility protein S1 family7.4e-1340.66Show/hide
Query:  NGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQK-PNAQH----KSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIY
        N  IL VHCKSK+ND+GV  L +G   ++ F+ NFW TT FWC L K P+ +      +++A  + +     YN        W+A+DDGIY
Subjt:  NGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQK-PNAQH----KSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIY

AT4G16295.1 S-protein homologue 13.3e-2142.31Show/hide
Query:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI
        L+ G+ L +HCKSK++DLG   L     F+W F  N  ++T FWCY+ K N  H +   FW     + L++ C   NCIW AK DG+YL ++ + +DVL 
Subjt:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI

Query:  HKWE
         KWE
Subjt:  HKWE

AT4G29035.1 Plant self-incompatibility protein S1 family9.6e-2141.35Show/hide
Query:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI
        L+ G+ L +HCKSK+NDLG   L     F+W F  N  ++TLFWCY+ K +  H + + FW     + L++ C   NC+W AK+DG+YL ++   +DVL 
Subjt:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLI

Query:  HKWE
         KW+
Subjt:  HKWE

AT5G04350.1 Plant self-incompatibility protein S1 family4.3e-1335.05Show/hide
Query:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYL-QKPNAQHK----SFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDN
        L + ++L VHC+SKD+DLG H L +G ++ + F  N W TT F C + Q PN +H     ++E  W         +   +++C WI ++DGIY   +
Subjt:  LSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYL-QKPNAQHK----SFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDN

AT5G06020.1 Plant self-incompatibility protein S1 family1.6e-1235.29Show/hide
Query:  SNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLIH
        +N  +L +HCKSKD+DLG H    G  + W+F VNF N+TL++C   +       F+    E      +  C   NC W AK D +Y   N  Q      
Subjt:  SNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLIH

Query:  KW
        KW
Subjt:  KW


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGATCCATGGCTAAGCAATGGCCAAATCTTGTCTGTTCATTGCAAATCAAAAGACAATGATTTAGGAGTTCACAAGCTTAGTGTTGGAACTGAATTCAATTGGAG
ATTTAGAGTAAACTTTTGGAATACGACGTTGTTTTGGTGTTACTTGCAGAAGCCAAATGCACAACATAAGTCATTCGAAGCCTTTTGGATTGAGAGCACGTCAATTTGGC
TCTATAATATGTGCTATGATTCTAATTGCATTTGGATAGCTAAAGATGATGGAATTTATTTGAAAGACAACACTGCTCAAAAAGATGTTTTGATTCATAAATGGGAATAA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGATCCATGGCTAAGCAATGGCCAAATCTTGTCTGTTCATTGCAAATCAAAAGACAATGATTTAGGAGTTCACAAGCTTAGTGTTGGAACTGAATTCAATTGGAG
ATTTAGAGTAAACTTTTGGAATACGACGTTGTTTTGGTGTTACTTGCAGAAGCCAAATGCACAACATAAGTCATTCGAAGCCTTTTGGATTGAGAGCACGTCAATTTGGC
TCTATAATATGTGCTATGATTCTAATTGCATTTGGATAGCTAAAGATGATGGAATTTATTTGAAAGACAACACTGCTCAAAAAGATGTTTTGATTCATAAATGGGAATAA
Protein sequenceShow/hide protein sequence
MADPWLSNGQILSVHCKSKDNDLGVHKLSVGTEFNWRFRVNFWNTTLFWCYLQKPNAQHKSFEAFWIESTSIWLYNMCYDSNCIWIAKDDGIYLKDNTAQKDVLIHKWE