; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G010910 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G010910
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionRho GTPase-activating protein like
Genome locationchr05:18676574..18682903
RNA-Seq ExpressionLsi05G010910
SyntenyLsi05G010910
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6606331.1 hypothetical protein SDJN03_03648, partial [Cucurbita argyrosperma subsp. sororia]5.8e-7080.79Show/hide
Query:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR
        MASSCLFHN PSIS+HPL RHRN  I  HSQF+P  SLKL+KQSFL N +IGKLR RGS SFP+VYA QNNFLRVFQTVWKVGKDGIEAGTDL   SVPR
Subjt:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR

Query:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSPISTEETLEEARRIMEKYK
        P+ARISV I AL+IGLFL KS+LSTA FVLAM+GAIYFIFIALNKDEGPRG GGS+SS  STEETLEEAR+IMEKYK
Subjt:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSPISTEETLEEARRIMEKYK
XP_004152015.1 uncharacterized protein LOC101207451 isoform X1 [Cucumis sativus]1.4e-7989.83Show/hide
Query:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR
        MASSCLFHNFPSIS HPLTRHRNP IS HSQ +P  SLKLK+QSFL NPQI KLR RGSPSFPLVYA QNNFLRVFQTVWK+GKDGIEAGTDL  DSVPR
Subjt:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR

Query:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSPISTEETLEEARRIMEKYK
        PIARISVGIVALTIGLFLFKS+LSTALFVLAMMGAIYFIFIALNKDEGPRG GGSSSSP STEETLEEARRIMEKYK
Subjt:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSPISTEETLEEARRIMEKYK
XP_008447333.1 PREDICTED: uncharacterized protein LOC103489804 [Cucumis melo]1.9e-7387.71Show/hide
Query:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR
        MASSCLFHNFPSISAHPLTRHRNP IS HSQF+P  SLKLKKQS     QI KLRARGSPSFPLVYA QNNFLRVFQTVWK+GKDGIEAGTDL   SVPR
Subjt:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR

Query:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGG--SSSSPISTEETLEEARRIMEKYK
        PIARISVGIVAL IGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRG GG  SSSS  STEETLEEARRIMEKYK
Subjt:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGG--SSSSPISTEETLEEARRIMEKYK
XP_022159605.1 uncharacterized protein LOC111025970 [Momordica charantia]4.4e-7083.15Show/hide
Query:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR
        MASS LFHNF SIS HP  RHRNPPI PHSQF+P  SLKLKKQS   N QI KL ARGSPSFPLVYA QNNFLRVFQTVWK+GKDGIEAGT L  DSVPR
Subjt:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR

Query:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGS-SSSPISTEETLEEARRIMEKYK
        PIARISV IVA TI LFL KS+LSTALFVLAMMGAIYF+FIALNKDEGPRG GGS SSS  STEETLEEARRIMEKYK
Subjt:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGS-SSSPISTEETLEEARRIMEKYK
XP_038887965.1 uncharacterized protein LOC120077928 [Benincasa hispida]4.3e-8192.18Show/hide
Query:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR
        MASSCLFHNFPSISAHPLTRHRN PIS HSQF+PS SLKLKKQSFLLNP+IGKLR RGSPSF LVYA QNNFLRVFQTVWKVGKDGIEAGTDL  DSVPR
Subjt:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR

Query:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGG--SSSSPISTEETLEEARRIMEKYK
        PIARISVG+VALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGG  SSSSP STEETLEEARRIMEKYK
Subjt:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGG--SSSSPISTEETLEEARRIMEKYK
TrEMBL top hitse value%identityAlignment
A0A0A0LCA2 Uncharacterized protein1.6e-5486.36Show/hide
Query:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR
        MASSCLFHNFPSIS HPLTRHRNP IS HSQ +P  SLKLK+QSFL NPQI KLR RGSPSFPLVYA QNNFLRVFQTVWK+GKDGIEAGTDL  DSVPR
Subjt:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR

Query:  PIARISVGIVALTIGLFLFKSILSTALFVLAM
        PIARISVGIVALTIGLFLFKS+LSTALFVL +
Subjt:  PIARISVGIVALTIGLFLFKSILSTALFVLAM
A0A1S3BHT2 uncharacterized protein LOC1034898049.3e-7487.71Show/hide
Query:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR
        MASSCLFHNFPSISAHPLTRHRNP IS HSQF+P  SLKLKKQS     QI KLRARGSPSFPLVYA QNNFLRVFQTVWK+GKDGIEAGTDL   SVPR
Subjt:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR

Query:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGG--SSSSPISTEETLEEARRIMEKYK
        PIARISVGIVAL IGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRG GG  SSSS  STEETLEEARRIMEKYK
Subjt:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGG--SSSSPISTEETLEEARRIMEKYK
A0A6J1DZ75 uncharacterized protein LOC1110259702.1e-7083.15Show/hide
Query:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR
        MASS LFHNF SIS HP  RHRNPPI PHSQF+P  SLKLKKQS   N QI KL ARGSPSFPLVYA QNNFLRVFQTVWK+GKDGIEAGT L  DSVPR
Subjt:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR

Query:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGS-SSSPISTEETLEEARRIMEKYK
        PIARISV IVA TI LFL KS+LSTALFVLAMMGAIYF+FIALNKDEGPRG GGS SSS  STEETLEEARRIMEKYK
Subjt:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGS-SSSPISTEETLEEARRIMEKYK
A0A6J1ESP6 uncharacterized protein LOC1114374053.7e-7080.23Show/hide
Query:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR
        MASSCLFHN PSIS+HPL RHRNP I  HSQF+P  SLKL+KQ FL N +IGKLR RGS SFP+VYA QNNFLRVFQTVWKVGKDGIEAGT+L   SVPR
Subjt:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR

Query:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSPISTEETLEEARRIMEKYK
        P+ARISV I AL+IGLFL KS+LSTA FVLAM+GAIYFIFIALNKDEGPRG GGS+SS  STEETLEEAR+IMEKYK
Subjt:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSPISTEETLEEARRIMEKYK
A0A6J1K1P0 uncharacterized protein LOC1114916103.1e-6980.23Show/hide
Query:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR
        MASSCLFHN PSIS+HPL RHRN  I  HSQF+P  SLKL+KQSFL   +IGKLR R S SFP+VYA QNNFLRVFQTVWKVGKDGIEAGTDL  DSVPR
Subjt:  MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPR

Query:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSPISTEETLEEARRIMEKYK
        P+ARISV I AL+IGLFL KS+LSTA FVLAM+GAIYFIFIALNKDEGPRG GGS+SS  STEETLEEAR+IMEKYK
Subjt:  PIARISVGIVALTIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSPISTEETLEEARRIMEKYK
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT4G13220.1 unknown protein7.9e-3355.19Show/hide
Query:  PHSQFI-PSKSLKLKKQSFL-LNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPRPIARISVGIVALTIGLFLFKSILST
        P+S F+ P   LKLK  S L L  +I  L+ +   S  LV + Q++FL+V +T W +GKDGIEAGT+L   SVPRP+ARISV I AL + LF+ KS LST
Subjt:  PHSQFI-PSKSLKLKKQSFL-LNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDL--DSVPRPIARISVGIVALTIGLFLFKSILST

Query:  ALFVLAMMGAIYFIFIALNKDEGP--RGDGGSSSSPISTEETLEEARRIMEKYK
        A FVL  MG  YF+FIALNKDE P  RGD  SS S  S ++ LEEA++IM+KYK
Subjt:  ALFVLAMMGAIYFIFIALNKDEGP--RGDGGSSSSPISTEETLEEARRIMEKYK

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCTTCATGTCTATTTCACAATTTTCCTTCAATTTCTGCACACCCTTTAACACGCCATAGAAATCCACCCATTTCCCCTCATTCCCAGTTTATCCCTTCCAAGTC
CTTAAAACTCAAAAAACAATCTTTTCTCTTAAATCCACAAATTGGGAAGCTAAGAGCCCGAGGGTCTCCTTCTTTCCCTCTTGTGTATGCGGTTCAGAATAATTTCTTGA
GAGTCTTTCAGACAGTTTGGAAGGTTGGGAAGGATGGAATTGAGGCAGGAACAGACCTAGACTCTGTACCAAGACCAATTGCAAGGATATCTGTTGGAATAGTTGCATTA
ACAATTGGACTCTTTTTGTTCAAGTCAATTTTGTCTACAGCCTTATTTGTGCTGGCTATGATGGGAGCAATTTATTTCATATTTATAGCGTTGAATAAAGATGAAGGGCC
AAGAGGAGATGGAGGCTCCTCCTCCTCCCCAATCTCTACAGAAGAGACTCTTGAAGAAGCCAGAAGAATAATGGAGAAGTACAAATAG
mRNA sequenceShow/hide mRNA sequence
GAAGCCTCACCTTCTTCCTCCATTCAATTCAACCATCGTTTCAGAATCATCCATTTTAATGGCTTCTTCATGTCTATTTCACAATTTTCCTTCAATTTCTGCACACCCTT
TAACACGCCATAGAAATCCACCCATTTCCCCTCATTCCCAGTTTATCCCTTCCAAGTCCTTAAAACTCAAAAAACAATCTTTTCTCTTAAATCCACAAATTGGGAAGCTA
AGAGCCCGAGGGTCTCCTTCTTTCCCTCTTGTGTATGCGGTTCAGAATAATTTCTTGAGAGTCTTTCAGACAGTTTGGAAGGTTGGGAAGGATGGAATTGAGGCAGGAAC
AGACCTAGACTCTGTACCAAGACCAATTGCAAGGATATCTGTTGGAATAGTTGCATTAACAATTGGACTCTTTTTGTTCAAGTCAATTTTGTCTACAGCCTTATTTGTGC
TGGCTATGATGGGAGCAATTTATTTCATATTTATAGCGTTGAATAAAGATGAAGGGCCAAGAGGAGATGGAGGCTCCTCCTCCTCCCCAATCTCTACAGAAGAGACTCTT
GAAGAAGCCAGAAGAATAATGGAGAAGTACAAATAGCAACACCTGCTGAAATCCAGTGTCAAATACTCCAAAGGAATTTGGTATAATCATTCCCCATAAATTGTCAAATA
TCATCACCCTAGTCTTGCTCCCCACCAGGATATGAAGTTAATATTAGTCAACAAGACTAATATTGCTTCAAAACCCAAACAATCTCAAGTTTGTCTGCTTTATAACTTTT
TGGGGTCACTTGACCGTACAAGAGTTGCTAAGCTATATGTGCTGGTATCTTATCCAATTGAAAGTTGTAAATACCATGAATTTGAGGAGTACAAGCATAACAAACACACT
GCTCTCTTTGTAATTAAGATGCAAAGCTTTATTTTTCTGGGTTACATACACCATGACCCATTTTATCTTCTGAAGCGATGTTCCAGATTTCACATATTTGTAATTAATTT
GATGTTTGAACTCTATCCTTTGAAATGCTTGGTGAAGATTTAGATTTATTTTCAATGTAGTTGCTGAAGTCTATATTGTTTTCCTATGCGACTCTGATTCATGATGAAAC
AATCCCTTGATATAAATTCGTATTGGAGGTTACCAGTTAGTTATGTGTCGTAACCATGCCCATATGCAAAAGTAAGAGGTTTTGAATGAGGTAGGGACCCTCTTTTGTAA
TACTGCTAGTATTAAGAAAAAATAGGTATACGAAACGAGTTCGGAGTTGCTCGGTTTGGTGAGGAGAGACAGGCCTCTTGAAGGCGCAATGTGAGCTTAATGAAGACCAT
GAAAGCATGGTACAGCTATAGCTCAGTGCCTCTTCTAAGTTCACATGGGCAAAAGATGACAACTCAAGTGAAGCTCATAATTGCAACATGGGTGGTTTGAACAAACTAGT
TGGCAAGAAAAACGACATTGTTTTATAGGTATAAGAAATGGACACATGACTAGAGGCCCTCTATCACCACGTGTCCACAGTGCAGGTTGTAGCATTTGTCATTTATTCAT
AAATTATTGTGGAAAAATCTTTATTTCAGGCTCATTCTGTTCATGAATTATTGAGGGAACATCTTTATTTCAGGCTTATTCTGTTCATTTATGATTTGAAGTTCATTAAT
GCCTCTAATTATCACTTTTTACACAAATGTAAAGGGAAACAATTAGAACTAATCAGCCATTATTTCTTTACACAAATGTAAAGGGTTGACAGTGGTGGACAGTAGAAAAT
AGCAGAGTATTTCATTAGAGGAACCCGATTAAGAAGTGATATCAGACAAGGTTGCCTCTTTAGGATTAGATTTCTTATTACTAGTTGCTCAGCCTCTGATTAAGTTTTAG
TATCAAGATGATGATATGTTTTAGTATCAGCCACTGATCTGTTATCTGGCACATCCTAGCAGGGTTCGGGAGCAATGGCCCCTAAACCTAATTTATATTCGTATTTATGT
TGTTTACAATTTTGGCCCTAGGGTTTAGTAGTGGAGCATTATATAAATTCTCTAACTTTATTGGCACCTCTGAATTTGTATTATCTGATATTTCTCTCTAATAAAATCTG
AT
Protein sequenceShow/hide protein sequence
MASSCLFHNFPSISAHPLTRHRNPPISPHSQFIPSKSLKLKKQSFLLNPQIGKLRARGSPSFPLVYAVQNNFLRVFQTVWKVGKDGIEAGTDLDSVPRPIARISVGIVAL
TIGLFLFKSILSTALFVLAMMGAIYFIFIALNKDEGPRGDGGSSSSPISTEETLEEARRIMEKYK