| GenBank top hits | e value | %identity | Alignment |
|---|
| KAF7149680.1 hypothetical protein RHSIM_Rhsim02G0053600 [Rhododendron simsii] | 2.0e-37 | 70.23 | Show/hide |
Query: ANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHS------GHPGF
+NNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDV EYEIT+EGRRITKLDQILLNGNNIAIV S++HS P
Subjt: ANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHS------GHPGF
Query: YRPPSVA---GVFLAPKC-CRLVPGGSPDPE
PP + + A C +LVPGGSPDPE
Subjt: YRPPSVA---GVFLAPKC-CRLVPGGSPDPE
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| KAG6761174.1 hypothetical protein POTOM_034373 [Populus tomentosa] | 2.2e-36 | 73.98 | Show/hide |
Query: MAN-NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPP
MAN NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIV G+S
Subjt: MAN-NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPP
Query: SVAGVFLAPKCCRLVPGGSPDPE
+L LVPGGSPDPE
Subjt: SVAGVFLAPKCCRLVPGGSPDPE
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| KAG7036265.1 Sm-like protein LSM5, partial [Cucurbita argyrosperma subsp. argyrosperma] | 6.5e-36 | 71.31 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAI
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
Query: VAGVFLAPKCCRLVPGGSPDPE
LVPGGSPDPE
Subjt: VAGVFLAPKCCRLVPGGSPDPE
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| RZC51435.1 hypothetical protein C5167_019878 [Papaver somniferum] | 2.9e-36 | 71.31 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
M++NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRR+TKLDQILLNGNNIAI HP
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
Query: VAGVFLAPKCCRLVPGGSPDPE
+ L +LVPGGSPDPE
Subjt: VAGVFLAPKCCRLVPGGSPDPE
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| XP_004504703.1 sm-like protein LSM5 [Cicer arietinum] | 6.5e-36 | 71.31 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAI
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
Query: VAGVFLAPKCCRLVPGGSPDPE
LVPGGSPDPE
Subjt: VAGVFLAPKCCRLVPGGSPDPE
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| TrEMBL top hits | e value | %identity | Alignment |
|---|
| A0A0B0NQ45 U6 snRNA-associated Sm-like protein LSm5 | 3.1e-36 | 71.31 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAI
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
Query: VAGVFLAPKCCRLVPGGSPDPE
LVPGGSPDPE
Subjt: VAGVFLAPKCCRLVPGGSPDPE
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| A0A2P5WT65 U6 snRNA-associated Sm-like protein LSm5 | 3.1e-36 | 71.31 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAI
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
Query: VAGVFLAPKCCRLVPGGSPDPE
LVPGGSPDPE
Subjt: VAGVFLAPKCCRLVPGGSPDPE
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| A0A4Y7IVK9 Sm domain-containing protein | 1.4e-36 | 71.31 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
M++NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRR+TKLDQILLNGNNIAI HP
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
Query: VAGVFLAPKCCRLVPGGSPDPE
+ L +LVPGGSPDPE
Subjt: VAGVFLAPKCCRLVPGGSPDPE
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| A0A6A3A5D5 U6 snRNA-associated Sm-like protein LSm5 | 3.1e-36 | 71.31 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAI
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
Query: VAGVFLAPKCCRLVPGGSPDPE
LVPGGSPDPE
Subjt: VAGVFLAPKCCRLVPGGSPDPE
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| I3SAC1 U6 snRNA-associated Sm-like protein LSm5 | 3.1e-36 | 71.31 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAI
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEGMSLIHSGHPGFYRPPS
Query: VAGVFLAPKCCRLVPGGSPDPE
LVPGGSPDPE
Subjt: VAGVFLAPKCCRLVPGGSPDPE
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| SwissProt top hits | e value | %identity | Alignment |
|---|
| P62322 U6 snRNA-associated Sm-like protein LSm5 | 4.0e-28 | 74.07 | Show/hide |
Query: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEG
NPSQLLP EL+D+CIGS+I ++MK DKE+VGTL GFD +VNMVLEDVTE+EIT EGRRITKLDQILLNGNNI ++ EG
Subjt: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEG
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| Q2HJH0 U6 snRNA-associated Sm-like protein LSm5 | 4.0e-28 | 74.07 | Show/hide |
Query: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEG
NPSQLLP EL+D+CIGS+I ++MK DKE+VGTL GFD +VNMVLEDVTE+EIT EGRRITKLDQILLNGNNI ++ EG
Subjt: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEG
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| Q5R628 U6 snRNA-associated Sm-like protein LSm5 | 4.0e-28 | 74.07 | Show/hide |
Query: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEG
NPSQLLP EL+D+CIGS+I ++MK DKE+VGTL GFD +VNMVLEDVTE+EIT EGRRITKLDQILLNGNNI ++ EG
Subjt: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEG
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| Q9FKB0 Sm-like protein LSM5 | 1.4e-36 | 94.87 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIV
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVG L+GFDVYVNMVLEDVTEYEITAEGRR+TKLDQILLNGNNIAI+
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIV
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| Q9Y4Y9 U6 snRNA-associated Sm-like protein LSm5 | 4.0e-28 | 74.07 | Show/hide |
Query: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEG
NPSQLLP EL+D+CIGS+I ++MK DKE+VGTL GFD +VNMVLEDVTE+EIT EGRRITKLDQILLNGNNI ++ EG
Subjt: NPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGTCEG
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| Arabidopsis top hits | e value | %identity | Alignment |
|---|
| AT2G18740.1 Small nuclear ribonucleoprotein family protein | 3.3e-06 | 36.84 | Show/hide |
Query: PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGT
P LI R + SK IW+ + D + G + GFD Y+N+VL++ E I R+ L +ILL G+NI ++ T
Subjt: PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIVRGT
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| AT3G14080.1 Small nuclear ribonucleoprotein family protein | 1.4e-04 | 28.38 | Show/hide |
Query: PSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIV
P ++ S + + K+ V+++ ++L+GTLR FD + N VLE E I E L ++ G N+ ++
Subjt: PSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIV
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| AT3G14080.2 Small nuclear ribonucleoprotein family protein | 1.4e-04 | 28.38 | Show/hide |
Query: PSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIV
P ++ S + + K+ V+++ ++L+GTLR FD + N VLE E I E L ++ G N+ ++
Subjt: PSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIV
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| AT4G30330.1 Small nuclear ribonucleoprotein family protein | 9.7e-06 | 36.99 | Show/hide |
Query: PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIV
P LI R + SK IW+ + D + G + GFD Y+N+VL++ E I + R+ L +ILL G+NI ++
Subjt: PSELIDRCIGSK----IWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIV
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| AT5G48870.1 Small nuclear ribonucleoprotein family protein | 9.7e-38 | 94.87 | Show/hide |
Query: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIV
MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVG L+GFDVYVNMVLEDVTEYEITAEGRR+TKLDQILLNGNNIAI+
Subjt: MANNPSQLLPSELIDRCIGSKIWVIMKGDKELVGTLRGFDVYVNMVLEDVTEYEITAEGRRITKLDQILLNGNNIAIV
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