; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G011100 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G011100
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:18876276..18876938
RNA-Seq ExpressionLsi05G011100
SyntenyLsi05G011100
Gene Ontology termsGO:0010089 - xylem development (biological process)
GO:0033612 - receptor serine/threonine kinase binding (molecular function)
InterPro domainsIPR037495 - CLAVATA3/ESR (CLE)-related protein 41/42/44


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068203.1 hypothetical protein E6C27_scaffold238G001890 [Cucumis melo var. makuwa]4.0e-5258.82Show/hide
Query:  MAATTISSSSNSEFLKQRHS------HHLFHLIPSLTLLFLFLTTTAVLGSPSMAASEPQRRLIQHSSNNSRQIQKSESESGGKRRRDDRRFESAALQVP
        MAATTIS+S  S  LKQ HS      HHLFHL P LTLLFLFL T A+LGSPSMAA EP                KS SES G RRRDDRRFESA LQVP
Subjt:  MAATTISSSSNSEFLKQRHS------HHLFHLIPSLTLLFLFLTTTAVLGSPSMAASEPQRRLIQHSSNNSRQIQKSESESGGKRRRDDRRFESAALQVP

Query:  SGLKPSSNNPPQKQKMESESSGRRRRDDLRFESAALE-----------------------------VPSGRKPSSNNPLRKQILESESSGRRRRDYRQFE
        SG KP+SNN  Q+Q++ESESS RR  D  RFES   +                             V SG K SS NP RK+ LESESSGRR RDYR+FE
Subjt:  SGLKPSSNNPPQKQKMESESSGRRRRDDLRFESAALE-----------------------------VPSGRKPSSNNPLRKQILESESSGRRRRDYRQFE

Query:  SVALEVSNGRTNHASNNPSRKQKSDSESGGRRRRYDRRFESAAHEVPSGPNPISN
        S AL+V N + NHASNNP  KQK +SESGG RRR DR FESAAHEVPSGPNPISN
Subjt:  SVALEVSNGRTNHASNNPSRKQKSDSESGGRRRRYDRRFESAAHEVPSGPNPISN

KAE8650847.1 hypothetical protein Csa_002136 [Cucumis sativus]4.3e-4659.82Show/hide
Query:  MAATTISSSSNSEFLKQRHS----HHLFHLIPSLTLLFLFLTTTAVLGSPSMAASEPQRRLIQHSSNNSRQIQKSESESGGKRRRDDRRFESAALQVPSG
        MAA TIS+S  S+ LKQ H+    HHLFHLIPSLTLLFLFLT T +LGSPSMAA EP                 SESES G RRRDD RFESA LQVPSG
Subjt:  MAATTISSSSNSEFLKQRHS----HHLFHLIPSLTLLFLFLTTTAVLGSPSMAASEPQRRLIQHSSNNSRQIQKSESESGGKRRRDDRRFESAALQVPSG

Query:  LKPSSNNPPQKQKMESESSGRRRRDDLRFESAALEVPSGRKPSSNNPLRKQILESESSGRRRRDYRQFESVALEVSNGRTNHASNNPSRKQKSDSESGGR
        LKP+SNN  QKQ++ SES  R RRD  RFES         KP SN P++K + ESE +GRR R YR+FES A       T  +SNNP RK++   ES GR
Subjt:  LKPSSNNPPQKQKMESESSGRRRRDDLRFESAALEVPSGRKPSSNNPLRKQILESESSGRRRRDYRQFESVALEVSNGRTNHASNNPSRKQKSDSESGGR

Query:  RRRYDRRFESAAHEVPSGPNPISN
        RRR D  FESAAHEVPSGPNPISN
Subjt:  RRRYDRRFESAAHEVPSGPNPISN

XP_022931103.1 uncharacterized protein LOC111437389 [Cucurbita moschata]2.4e-2545.91Show/hide
Query:  MAATTISSSSNSEFLKQRHSHHLFHLIPSLTLLFLFLTTTAVLGSPSMAASEPQRRLIQHSSNNSRQIQKSESESGGKRRRDDRRFESAALQVPSGLKPS
        MA  + SSS NS   +        +LIPSLTLLF+FL T  VLGSPSMAASE Q RLI HS NN  +  + ESESGG+R RDDR  ESA  +V SG    
Subjt:  MAATTISSSSNSEFLKQRHSHHLFHLIPSLTLLFLFLTTTAVLGSPSMAASEPQRRLIQHSSNNSRQIQKSESESGGKRRRDDRRFESAALQVPSGLKPS

Query:  SNNPPQKQKMESESSGRRRRDDLRFESAALEVPSGRKPSSNNPLRKQILESESSGRRRRDYRQFESVALEVSNGRTNHASNNPSRKQKSDSESGGRRRRY
         NNPP+KQ+ +SES GR RR+D                                    RD                   SN+P R+Q  D +SGG+RR  
Subjt:  SNNPPQKQKMESESSGRRRRDDLRFESAALEVPSGRKPSSNNPLRKQILESESSGRRRRDYRQFESVALEVSNGRTNHASNNPSRKQKSDSESGGRRRRY

Query:  DRRFESAAHEVPSGPNPISN
        D RFESAAHEVPSGPNPISN
Subjt:  DRRFESAAHEVPSGPNPISN

TrEMBL top hitse value%identityAlignment
A0A0A0LE33 Uncharacterized protein3.9e-5358.1Show/hide
Query:  MAATTISSSSNSEFLKQRHS----HHLFHLIPSLTLLFLFLTTTAVLGSPSMAASEPQRRLIQHSSNNSRQIQKSESESGGKRRRDDRRFESAALQVPSG
        MAA TIS+S  S+ LKQ H+    HHLFHLIPSLTLLFLFLT T +LGSPSMAA EP                 SESES G RRRDD RFESA LQVPSG
Subjt:  MAATTISSSSNSEFLKQRHS----HHLFHLIPSLTLLFLFLTTTAVLGSPSMAASEPQRRLIQHSSNNSRQIQKSESESGGKRRRDDRRFESAALQVPSG

Query:  LKPSSNNPPQKQKMESESSGRRRRDDLRFESAALE-----------------------------VPSGRKPSSNNPLRKQILESESSGRRRRDYRQFESV
        LKP+SNN  QKQ++ SES  R RRD  RFES   +                               SG KPSSNNP RK+ L+ ESSGRR RDYR+FES 
Subjt:  LKPSSNNPPQKQKMESESSGRRRRDDLRFESAALE-----------------------------VPSGRKPSSNNPLRKQILESESSGRRRRDYRQFESV

Query:  ALEVSNGRTNHASNNPSRKQKSDSESGGRRRRYDRRFESAAHEVPSGPNPISN
         L+V  G+ NHASNNP  KQK +SESG RRRR D  FESAAHEVPSGPNPISN
Subjt:  ALEVSNGRTNHASNNPSRKQKSDSESGGRRRRYDRRFESAAHEVPSGPNPISN

A0A5D3DC24 Uncharacterized protein1.9e-5258.82Show/hide
Query:  MAATTISSSSNSEFLKQRHS------HHLFHLIPSLTLLFLFLTTTAVLGSPSMAASEPQRRLIQHSSNNSRQIQKSESESGGKRRRDDRRFESAALQVP
        MAATTIS+S  S  LKQ HS      HHLFHL P LTLLFLFL T A+LGSPSMAA EP                KS SES G RRRDDRRFESA LQVP
Subjt:  MAATTISSSSNSEFLKQRHS------HHLFHLIPSLTLLFLFLTTTAVLGSPSMAASEPQRRLIQHSSNNSRQIQKSESESGGKRRRDDRRFESAALQVP

Query:  SGLKPSSNNPPQKQKMESESSGRRRRDDLRFESAALE-----------------------------VPSGRKPSSNNPLRKQILESESSGRRRRDYRQFE
        SG KP+SNN  Q+Q++ESESS RR  D  RFES   +                             V SG K SS NP RK+ LESESSGRR RDYR+FE
Subjt:  SGLKPSSNNPPQKQKMESESSGRRRRDDLRFESAALE-----------------------------VPSGRKPSSNNPLRKQILESESSGRRRRDYRQFE

Query:  SVALEVSNGRTNHASNNPSRKQKSDSESGGRRRRYDRRFESAAHEVPSGPNPISN
        S AL+V N + NHASNNP  KQK +SESGG RRR DR FESAAHEVPSGPNPISN
Subjt:  SVALEVSNGRTNHASNNPSRKQKSDSESGGRRRRYDRRFESAAHEVPSGPNPISN

A0A6J1EXF7 uncharacterized protein LOC1114373891.2e-2545.91Show/hide
Query:  MAATTISSSSNSEFLKQRHSHHLFHLIPSLTLLFLFLTTTAVLGSPSMAASEPQRRLIQHSSNNSRQIQKSESESGGKRRRDDRRFESAALQVPSGLKPS
        MA  + SSS NS   +        +LIPSLTLLF+FL T  VLGSPSMAASE Q RLI HS NN  +  + ESESGG+R RDDR  ESA  +V SG    
Subjt:  MAATTISSSSNSEFLKQRHSHHLFHLIPSLTLLFLFLTTTAVLGSPSMAASEPQRRLIQHSSNNSRQIQKSESESGGKRRRDDRRFESAALQVPSGLKPS

Query:  SNNPPQKQKMESESSGRRRRDDLRFESAALEVPSGRKPSSNNPLRKQILESESSGRRRRDYRQFESVALEVSNGRTNHASNNPSRKQKSDSESGGRRRRY
         NNPP+KQ+ +SES GR RR+D                                    RD                   SN+P R+Q  D +SGG+RR  
Subjt:  SNNPPQKQKMESESSGRRRRDDLRFESAALEVPSGRKPSSNNPLRKQILESESSGRRRRDYRQFESVALEVSNGRTNHASNNPSRKQKSDSESGGRRRRY

Query:  DRRFESAAHEVPSGPNPISN
        D RFESAAHEVPSGPNPISN
Subjt:  DRRFESAAHEVPSGPNPISN

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGCAACAACAATTTCAAGTTCATCAAATTCTGAATTCCTTAAACAACGCCATTCTCATCATCTCTTTCACCTAATTCCATCTCTAACTCTTCTCTTCCTCTTTCT
CACAACCACCGCCGTCCTTGGCAGCCCTTCCATGGCTGCCTCGGAGCCGCAGAGACGTTTAATTCAACATTCCTCCAACAATTCGCGGCAGATACAGAAGTCGGAGTCGG
AATCCGGCGGAAAGCGTCGGAGAGATGATCGTCGATTCGAATCTGCCGCTCTACAGGTTCCGAGCGGACTGAAACCTAGTTCGAACAATCCGCCGCAGAAACAGAAGATG
GAGTCGGAATCCAGCGGCAGGAGGCGGAGAGACGATCTTCGTTTTGAATCCGCTGCTCTCGAAGTTCCGAGCGGACGGAAACCTAGTTCGAACAATCCGCTGCGGAAACA
GATATTGGAGTCTGAATCAAGCGGCAGGCGGCGGAGAGACTATCGTCAATTTGAATCCGTAGCTCTCGAAGTTTCAAACGGCCGAACAAATCACGCTTCGAACAATCCGT
CGCGAAAACAGAAGTCGGACTCGGAATCAGGCGGCAGGCGGCGGAGATATGACCGTCGATTTGAATCCGCGGCGCACGAAGTTCCGAGCGGGCCGAATCCGATTTCGAAT
TAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGCAACAACAATTTCAAGTTCATCAAATTCTGAATTCCTTAAACAACGCCATTCTCATCATCTCTTTCACCTAATTCCATCTCTAACTCTTCTCTTCCTCTTTCT
CACAACCACCGCCGTCCTTGGCAGCCCTTCCATGGCTGCCTCGGAGCCGCAGAGACGTTTAATTCAACATTCCTCCAACAATTCGCGGCAGATACAGAAGTCGGAGTCGG
AATCCGGCGGAAAGCGTCGGAGAGATGATCGTCGATTCGAATCTGCCGCTCTACAGGTTCCGAGCGGACTGAAACCTAGTTCGAACAATCCGCCGCAGAAACAGAAGATG
GAGTCGGAATCCAGCGGCAGGAGGCGGAGAGACGATCTTCGTTTTGAATCCGCTGCTCTCGAAGTTCCGAGCGGACGGAAACCTAGTTCGAACAATCCGCTGCGGAAACA
GATATTGGAGTCTGAATCAAGCGGCAGGCGGCGGAGAGACTATCGTCAATTTGAATCCGTAGCTCTCGAAGTTTCAAACGGCCGAACAAATCACGCTTCGAACAATCCGT
CGCGAAAACAGAAGTCGGACTCGGAATCAGGCGGCAGGCGGCGGAGATATGACCGTCGATTTGAATCCGCGGCGCACGAAGTTCCGAGCGGGCCGAATCCGATTTCGAAT
TAA
Protein sequenceShow/hide protein sequence
MAATTISSSSNSEFLKQRHSHHLFHLIPSLTLLFLFLTTTAVLGSPSMAASEPQRRLIQHSSNNSRQIQKSESESGGKRRRDDRRFESAALQVPSGLKPSSNNPPQKQKM
ESESSGRRRRDDLRFESAALEVPSGRKPSSNNPLRKQILESESSGRRRRDYRQFESVALEVSNGRTNHASNNPSRKQKSDSESGGRRRRYDRRFESAAHEVPSGPNPISN