; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G011130 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G011130
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionBSD domain-containing protein
Genome locationchr05:18926636..18934437
RNA-Seq ExpressionLsi05G011130
SyntenyLsi05G011130
Gene Ontology termsNA
InterPro domainsIPR000953 - Chromo/chromo shadow domain
IPR005607 - BSD domain
IPR035925 - BSD domain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0053340.1 BSD domain-containing protein [Cucumis melo var. makuwa]3.2e-5691.8Show/hide
Query:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP
        MSLSSWFRR+LLRENGQFT ASIPLQQSH EKEE+FLGVTDRLIEFVKSFTF+TFKNFPL DEGEA  GDENLSDWQERHAV+VLSKVKEISQLRYKLCP
Subjt:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP

Query:  GHLKEQQFWKIYFALVKSLVFD
        GHLKEQQFWKIYFALVKSLVF+
Subjt:  GHLKEQQFWKIYFALVKSLVFD

KAG7036259.1 hypothetical protein SDJN02_03062 [Cucurbita argyrosperma subsp. argyrosperma]3.8e-4983.61Show/hide
Query:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP
        MSLSSWFRR+LLR+  QFT++SIPL++S  EKEEQF GVTD LIEFVKSFT +TFKNFPLQDEGEA  GD+NLSDWQERHAV+VLSKVKEISQLRYKLCP
Subjt:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP

Query:  GHLKEQQFWKIYFALVKSLVFD
        GHLKE QFWKIYFALVKSLV D
Subjt:  GHLKEQQFWKIYFALVKSLVFD

XP_004144378.1 uncharacterized protein LOC101211516 [Cucumis sativus]1.0e-5793.44Show/hide
Query:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP
        MSLSSWFRR+LLRENGQFT+ASIPLQQSH EKEEQFLGVTDRLIEFVKSFTFDTFKNFPL DEGEA  GDENLSDWQERHAV+VLSKVKEISQLRYKLCP
Subjt:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP

Query:  GHLKEQQFWKIYFALVKSLVFD
        GHLKEQQFWKIYFALVKSLVF+
Subjt:  GHLKEQQFWKIYFALVKSLVFD

XP_008465467.1 PREDICTED: uncharacterized protein LOC103503073 [Cucumis melo]1.3e-5790.55Show/hide
Query:  QTHRTMSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLR
        Q  RTMSLSSWFRR+LLRENGQFT ASIPLQQSH EKEE+FLGVTDRLIEFVKSFTF+TFKNFPL DEGEA  GDENLSDWQERHAV+VLSKVKEISQLR
Subjt:  QTHRTMSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLR

Query:  YKLCPGHLKEQQFWKIYFALVKSLVFD
        YKLCPGHLKEQQFWKIYFALVKSLVF+
Subjt:  YKLCPGHLKEQQFWKIYFALVKSLVFD

XP_038888694.1 uncharacterized protein LOC120078494 [Benincasa hispida]3.8e-5792.62Show/hide
Query:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP
        MSLSSW RR+LLRENGQFTKASIP+QQSH EKEEQFLGVTDRLIEFVKSFTF+TFKNFPL DEGEAPRGDE LSDWQERHAV+VLSKVKEISQLRYKLCP
Subjt:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP

Query:  GHLKEQQFWKIYFALVKSLVFD
        GHLKEQQFWKIYFALVKSLVF+
Subjt:  GHLKEQQFWKIYFALVKSLVFD

TrEMBL top hitse value%identityAlignment
A0A0A0L939 BSD domain-containing protein4.8e-5893.44Show/hide
Query:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP
        MSLSSWFRR+LLRENGQFT+ASIPLQQSH EKEEQFLGVTDRLIEFVKSFTFDTFKNFPL DEGEA  GDENLSDWQERHAV+VLSKVKEISQLRYKLCP
Subjt:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP

Query:  GHLKEQQFWKIYFALVKSLVFD
        GHLKEQQFWKIYFALVKSLVF+
Subjt:  GHLKEQQFWKIYFALVKSLVFD

A0A1S3CNW3 uncharacterized protein LOC1035030736.3e-5890.55Show/hide
Query:  QTHRTMSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLR
        Q  RTMSLSSWFRR+LLRENGQFT ASIPLQQSH EKEE+FLGVTDRLIEFVKSFTF+TFKNFPL DEGEA  GDENLSDWQERHAV+VLSKVKEISQLR
Subjt:  QTHRTMSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLR

Query:  YKLCPGHLKEQQFWKIYFALVKSLVFD
        YKLCPGHLKEQQFWKIYFALVKSLVF+
Subjt:  YKLCPGHLKEQQFWKIYFALVKSLVFD

A0A5A7UDR9 BSD domain-containing protein1.6e-5691.8Show/hide
Query:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP
        MSLSSWFRR+LLRENGQFT ASIPLQQSH EKEE+FLGVTDRLIEFVKSFTF+TFKNFPL DEGEA  GDENLSDWQERHAV+VLSKVKEISQLRYKLCP
Subjt:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP

Query:  GHLKEQQFWKIYFALVKSLVFD
        GHLKEQQFWKIYFALVKSLVF+
Subjt:  GHLKEQQFWKIYFALVKSLVFD

A0A6J1ESK6 uncharacterized protein LOC1114373881.6e-4881.97Show/hide
Query:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP
        MSLSSWFRR+LLR+  QFT++SIPL++S  EKEEQF GVT+ LIEFVKSFT +TFKNFPLQDEGEA  GD+NLSDWQERHAV+VLSKVKEISQLRYKLCP
Subjt:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP

Query:  GHLKEQQFWKIYFALVKSLVFD
        GHLKE QFWKIYFALVKSLV +
Subjt:  GHLKEQQFWKIYFALVKSLVFD

A0A6J1K4L6 uncharacterized protein LOC1114911351.6e-4881.97Show/hide
Query:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP
        MSLSSWFRR+LLR+  QFT+ SIPL++S  EKEEQF GVTD LIEFVKSFT +TFKNFPLQDEGEA  GD+NLSDWQERHAV+VLSKVKEISQLRYKLCP
Subjt:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCP

Query:  GHLKEQQFWKIYFALVKSLVFD
        GHLKE QFWKIYF+LVKSLV +
Subjt:  GHLKEQQFWKIYFALVKSLVFD

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
AT1G26300.1 BSD domain-containing protein2.6e-1950Show/hide
Query:  EKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGE--------APRGDENLSDWQERHAVVVLSKVKEISQLRYKLCPGHLKEQQFWKIYFALVKSLV
        E E    GVTD L EF +  T  TF+ FP QD+G+        A    ++LSDWQERHA +VL+ VK+IS+LRY+LCP  +KE++FW+IYF LV + V
Subjt:  EKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGE--------APRGDENLSDWQERHAVVVLSKVKEISQLRYKLCPGHLKEQQFWKIYFALVKSLV

AT1G26300.2 BSD domain-containing protein2.6e-1950Show/hide
Query:  EKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGE--------APRGDENLSDWQERHAVVVLSKVKEISQLRYKLCPGHLKEQQFWKIYFALVKSLV
        E E    GVTD L EF +  T  TF+ FP QD+G+        A    ++LSDWQERHA +VL+ VK+IS+LRY+LCP  +KE++FW+IYF LV + V
Subjt:  EKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGE--------APRGDENLSDWQERHAVVVLSKVKEISQLRYKLCPGHLKEQQFWKIYFALVKSLV

AT1G69030.1 BSD domain-containing protein4.4e-1950Show/hide
Query:  EKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEG--------EAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCPGHLKEQQFWKIYFALVKSLV
        E E    G+TD L EFVK  T  TF+ FP QDE          A    ++LS+WQERHA +VL  VK+IS+LRY+LCP  +KE++FW+IYF LV + V
Subjt:  EKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEG--------EAPRGDENLSDWQERHAVVVLSKVKEISQLRYKLCPGHLKEQQFWKIYFALVKSLV

AT3G24820.1 BSD domain-containing protein5.2e-2843.02Show/hide
Query:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKE--EQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEA----PRGDE------------NLSDWQERHAV
        M+++S  RR  LRE  + +  +     S +++E  ++ LGVTD LI+ V+SFT DTFKNF L+DE E     P GDE            +LSDWQE+HAV
Subjt:  MSLSSWFRRKLLRENGQFTKASIPLQQSHLEKE--EQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEA----PRGDE------------NLSDWQERHAV

Query:  VVLSKVKEISQLRYKLCPGHLKEQQFWKIYFALVKSLVFDLHVAMLSNPIVTTKLILQQVMKSASRTGNELE
        +VLSK KE+SQLR+KLCP  LKE QFW+IYF LV+ +V    V  +    +  ++ ++    S S+   E+E
Subjt:  VVLSKVKEISQLRYKLCPGHLKEQQFWKIYFALVKSLVFDLHVAMLSNPIVTTKLILQQVMKSASRTGNELE

AT5G65910.1 BSD domain-containing protein1.8e-1231.46Show/hide
Query:  PAADDDLAPATTNQTHRTMSLSSWFRRKLLRENG-----QFTK-ASIPLQQSHLE---KEEQFLGVTDRLIEFVKSFTF--DTFKNFPLQDEGEAPRGDE
        P  D+DL     N       +   FR  + + +G     +FTK AS  LQ S  +   K+   +GVT+ L+ FVK      +T+ +FPL D+ ++   D 
Subjt:  PAADDDLAPATTNQTHRTMSLSSWFRRKLLRENG-----QFTK-ASIPLQQSHLE---KEEQFLGVTDRLIEFVKSFTF--DTFKNFPLQDEGEAPRGDE

Query:  NLSDWQERHAVVVLSKVKEISQLRYKLCPGHLKEQQFWKIYFALVKSLVFDLHVAMLSNP-IVTTKLILQQVMKSASR
         L+D Q  HA+ V      ++ LR +LCP ++ E  FW+IYF LV   +   H  +LS P ++  + +L Q ++  S+
Subjt:  NLSDWQERHAVVVLSKVKEISQLRYKLCPGHLKEQQFWKIYFALVKSLVFDLHVAMLSNP-IVTTKLILQQVMKSASR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGATCGGGTTCAATTCCCGGCTGCGGATGATGATCTAGCGCCTGCGACTACAAATCAAACCCACAGAACAATGAGTTTGTCTTCTTGGTTTCGACGAAAACTTTTGAG
GGAAAACGGCCAGTTTACCAAAGCTTCGATTCCCTTACAACAATCCCATCTTGAGAAAGAAGAGCAATTCCTTGGAGTCACAGACAGATTGATCGAATTTGTTAAGTCCT
TCACTTTTGACACCTTCAAGAACTTTCCTCTTCAGGATGAAGGGGAAGCACCTCGTGGTGATGAGAATCTCTCGGATTGGCAGGAGCGACATGCGGTTGTTGTGCTGTCA
AAAGTCAAGGAAATTTCCCAACTAAGATATAAGCTTTGCCCTGGACACTTGAAGGAACAACAATTCTGGAAAATTTACTTTGCCCTTGTAAAGAGCCTTGTATTTGACTT
GCATGTGGCCATGCTGAGCAATCCAATAGTAACTACAAAGCTAATCTTGCAGCAAGTTATGAAATCTGCCAGTAGGACAGGAAACGAGTTAGAAGCTCTTATTCAATGGA
AGGGTCGGTCACTTGAGGAGGAAATCTGGGAATCTCATAAACTAGTGCAGAATCAGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGATCGGGTTCAATTCCCGGCTGCGGATGATGATCTAGCGCCTGCGACTACAAATCAAACCCACAGAACAATGAGTTTGTCTTCTTGGTTTCGACGAAAACTTTTGAG
GGAAAACGGCCAGTTTACCAAAGCTTCGATTCCCTTACAACAATCCCATCTTGAGAAAGAAGAGCAATTCCTTGGAGTCACAGACAGATTGATCGAATTTGTTAAGTCCT
TCACTTTTGACACCTTCAAGAACTTTCCTCTTCAGGATGAAGGGGAAGCACCTCGTGGTGATGAGAATCTCTCGGATTGGCAGGAGCGACATGCGGTTGTTGTGCTGTCA
AAAGTCAAGGAAATTTCCCAACTAAGATATAAGCTTTGCCCTGGACACTTGAAGGAACAACAATTCTGGAAAATTTACTTTGCCCTTGTAAAGAGCCTTGTATTTGACTT
GCATGTGGCCATGCTGAGCAATCCAATAGTAACTACAAAGCTAATCTTGCAGCAAGTTATGAAATCTGCCAGTAGGACAGGAAACGAGTTAGAAGCTCTTATTCAATGGA
AGGGTCGGTCACTTGAGGAGGAAATCTGGGAATCTCATAAACTAGTGCAGAATCAGTAATATGAACTGCGTGCAATTCAACTTGATAAACTCAGGAGGATGGCTTTAGGG
AATGAAGAATCTTCCAACTGCACTCCATATGAAGTTGAAATGTCAGAGACAAATACTGCATCACATTTAACTTCTGTATGTCCACCATCACCATAGAACCAAAGCCTGTA
TTTTGGAATCTCATTCTTAACAAGATTAACCGTACTGGAAACCAAATTTTTGCCCTCAAACTTGTGGCCATGCTCATGGTTTGACAAGGATGCAGTTGCAGTTGTACAAC
CTAAGTTCAAGTAGTAAGGTCATCAAATCAGAAAACATCACTCTAGAAAAAGAGGAGCTTTTGCTAAAGGAATATTATGAGCATAGATTGGTTGTCTAGAAGTTGAAGAA
TTGTACTAACCGTAATATGCAGAGCCGTGCAATGACCCACGTGAAAATGCTAAGCATTGCATCGAAGTAAGTGCATGCCGACAATTGAAGGATGGCTAAATTAGCGAAGA
AACCTCAATGCACGCCTTCAACCCCTCATGTGATCCCCAAAAAGAGCTCGATAGAAATATTCGAGATTGTAGCTACTTAAGGAACCACTTGCACCCATTCATATCGTCCT
TGGAGAGGCATATCACTTGCAAAGTCGAAGTTATACCTGCAAAAATCCACACAAATGTAAGGTGATTGACATGATGGAAGGGTCTTGATAATGATTTTCTAAATCTAAGT
ACATAAACATATCACAAAGATCAATTAAATCGCCTACTTCTG
Protein sequenceShow/hide protein sequence
MDRVQFPAADDDLAPATTNQTHRTMSLSSWFRRKLLRENGQFTKASIPLQQSHLEKEEQFLGVTDRLIEFVKSFTFDTFKNFPLQDEGEAPRGDENLSDWQERHAVVVLS
KVKEISQLRYKLCPGHLKEQQFWKIYFALVKSLVFDLHVAMLSNPIVTTKLILQQVMKSASRTGNELEALIQWKGRSLEEEIWESHKLVQNQ