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Lsi05G011270 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G011270
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSeed nucellus-specific protein
Genome locationchr05:19052320..19052664
RNA-Seq ExpressionLsi05G011270
SyntenyLsi05G011270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAB82329.1 seed nucellus-specific protein [Citrullus lanatus]7.4e-4277.88Show/hide
Query:  LSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPY-YDDDDRKYNWSPYKKPMPKPK
        + KVLVAML +SA+ M LL+NVEGGREM LKEATA AYPHVLNE YEGYKPKE+Y+CDGYKYK+K+CYEYGNCDKSPY  ++DDR+YN SPYKKP+PKPK
Subjt:  LSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPY-YDDDDRKYNWSPYKKPMPKPK

Query:  EMAGKYGVHQNSP
        EMA KYGVH N P
Subjt:  EMAGKYGVHQNSP

KAA0068070.1 Seed nucellus-specific protein [Cucumis melo var. makuwa]6.5e-3867.48Show/hide
Query:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNEN---------YEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPYYDDDDRKYNWS
        MT+SKVL+A+L VSA+ M LL+NVEGGREMA K+ TAK YP  L++N         YEGYKPKE+Y+CDGYKYK+KDCYEYGNCDKSPY +D D +YNW 
Subjt:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNEN---------YEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPYYDDDDRKYNWS

Query:  PYKKPMPKPKEMAGKYGVHQNSP
        PYKKP+ KPKEM  KYGVHQ+ P
Subjt:  PYKKPMPKPKEMAGKYGVHQNSP

KAE8650853.1 hypothetical protein Csa_001704, partial [Cucumis sativus]1.5e-3163.11Show/hide
Query:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNEN------------------YEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPYYD
        MT+SKVLVA+L VSAM M  L+NVEGGREMALK+ TAK Y   L+EN                  YEGYKPKE+Y+CDGYKY +KDCYEYGNCDKSPY +
Subjt:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNEN------------------YEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPYYD

Query:  DDDRKYNWSPYKKPMPKPKEMA
        D D +YNW P KKP+ KPKEMA
Subjt:  DDDRKYNWSPYKKPMPKPKEMA

KGN46573.1 hypothetical protein Csa_005092 [Cucumis sativus]1.0e-2760.34Show/hide
Query:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPY--YDDDDRKYNWSPYKKPMP
        MT  K LVA+LA S + M+ ++NVEG R+M LKEAT      VLNE  E    ++EYDCDGYKYK+KDCY+YGNCDKSPY   DDDD +YNW+ YK P+P
Subjt:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPY--YDDDDRKYNWSPYKKPMP

Query:  KPKEMAGKYGVHQNSP
        KPKE+  KY VH+N P
Subjt:  KPKEMAGKYGVHQNSP

TYK14008.1 Seed nucellus-specific protein [Cucumis melo var. makuwa]1.8e-2764.49Show/hide
Query:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPYYDDDDRKYNWSPYKKPMPKP
        M + K LVA+LA+S + M+ ++NVEGGREM LKEAT     HV NEN + YKPKEE  CDGYKYK+KDCYEYGNC KSPY D DD +YNW+ + KP+PKP
Subjt:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPYYDDDDRKYNWSPYKKPMPKP

Query:  KEMAGKY
        KEM  KY
Subjt:  KEMAGKY

TrEMBL top hitse value%identityAlignment
A0A0A0KAR7 Uncharacterized protein5.0e-2860.34Show/hide
Query:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPY--YDDDDRKYNWSPYKKPMP
        MT  K LVA+LA S + M+ ++NVEG R+M LKEAT      VLNE  E    ++EYDCDGYKYK+KDCY+YGNCDKSPY   DDDD +YNW+ YK P+P
Subjt:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPY--YDDDDRKYNWSPYKKPMP

Query:  KPKEMAGKYGVHQNSP
        KPKE+  KY VH+N P
Subjt:  KPKEMAGKYGVHQNSP

A0A0A0L8T2 Seed nucellus-specific protein8.5e-3662.88Show/hide
Query:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNEN------------------YEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPYYD
        MT+SKVLVA+L VSAM M  L+NVEGGREMALK+ TAK Y   L+EN                  YEGYKPKE+Y+CDGYKY +KDCYEYGNCDKSPY +
Subjt:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNEN------------------YEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPYYD

Query:  DDDRKYNWSPYKKPMPKPKEMAGKYGVHQNSP
        D D +YNW P KKP+ KPKEMA KYG HQ+ P
Subjt:  DDDRKYNWSPYKKPMPKPKEMAGKYGVHQNSP

A0A5A7VLH5 Seed nucellus-specific protein3.1e-3867.48Show/hide
Query:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNEN---------YEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPYYDDDDRKYNWS
        MT+SKVL+A+L VSA+ M LL+NVEGGREMA K+ TAK YP  L++N         YEGYKPKE+Y+CDGYKYK+KDCYEYGNCDKSPY +D D +YNW 
Subjt:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNEN---------YEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPYYDDDDRKYNWS

Query:  PYKKPMPKPKEMAGKYGVHQNSP
        PYKKP+ KPKEM  KYGVHQ+ P
Subjt:  PYKKPMPKPKEMAGKYGVHQNSP

A0A5D3CS37 Seed nucellus-specific protein8.6e-2864.49Show/hide
Query:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPYYDDDDRKYNWSPYKKPMPKP
        M + K LVA+LA+S + M+ ++NVEGGREM LKEAT     HV NEN + YKPKEE  CDGYKYK+KDCYEYGNC KSPY D DD +YNW+ + KP+PKP
Subjt:  MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPYYDDDDRKYNWSPYKKPMPKP

Query:  KEMAGKY
        KEM  KY
Subjt:  KEMAGKY

O22351 Seed nucellus-specific protein3.6e-4277.88Show/hide
Query:  LSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPY-YDDDDRKYNWSPYKKPMPKPK
        + KVLVAML +SA+ M LL+NVEGGREM LKEATA AYPHVLNE YEGYKPKE+Y+CDGYKYK+K+CYEYGNCDKSPY  ++DDR+YN SPYKKP+PKPK
Subjt:  LSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPY-YDDDDRKYNWSPYKKPMPKPK

Query:  EMAGKYGVHQNSP
        EMA KYGVH N P
Subjt:  EMAGKYGVHQNSP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGCTCAGTAAGGTTCTCGTTGCCATGCTCGCGGTCTCTGCCATGACAATGGTGCTTCTAAAAAATGTTGAAGGAGGAAGAGAGATGGCTCTGAAGGAAGCAACTGC
AAAAGCTTATCCTCATGTTTTAAACGAAAATTACGAGGGATACAAACCTAAGGAGGAATATGACTGTGATGGATACAAATACAAAAATAAAGATTGCTATGAATATGGCA
ACTGTGACAAATCTCCCTACTATGACGACGACGACCGTAAATACAACTGGAGTCCGTATAAGAAACCGATGCCAAAGCCAAAAGAGATGGCTGGGAAGTATGGAGTTCAC
CAGAATTCCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGCTCAGTAAGGTTCTCGTTGCCATGCTCGCGGTCTCTGCCATGACAATGGTGCTTCTAAAAAATGTTGAAGGAGGAAGAGAGATGGCTCTGAAGGAAGCAACTGC
AAAAGCTTATCCTCATGTTTTAAACGAAAATTACGAGGGATACAAACCTAAGGAGGAATATGACTGTGATGGATACAAATACAAAAATAAAGATTGCTATGAATATGGCA
ACTGTGACAAATCTCCCTACTATGACGACGACGACCGTAAATACAACTGGAGTCCGTATAAGAAACCGATGCCAAAGCCAAAAGAGATGGCTGGGAAGTATGGAGTTCAC
CAGAATTCCCCTTGA
Protein sequenceShow/hide protein sequence
MTLSKVLVAMLAVSAMTMVLLKNVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYDCDGYKYKNKDCYEYGNCDKSPYYDDDDRKYNWSPYKKPMPKPKEMAGKYGVH
QNSP