; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G011280 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G011280
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSeed nucellus-specific protein
Genome locationchr05:19068245..19068589
RNA-Seq ExpressionLsi05G011280
SyntenyLsi05G011280
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAB82329.1 seed nucellus-specific protein [Citrullus lanatus]1.5e-4279.65Show/hide
Query:  IGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNENYEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYN-DDDDRQYNWSPYKKSMSKPK
        +GK LV +LV+SA+AM LL+NVEGGREM LKEATA AYPHVLNE YEGYK KE+YECDGYKYKDK+CYEYGNCDKSPYN ++DDRQYN SPYKK + KPK
Subjt:  IGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNENYEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYN-DDDDRQYNWSPYKKSMSKPK

Query:  EMAGKYGVHLNFP
        EMA KYGVH NFP
Subjt:  EMAGKYGVHLNFP

KAA0068070.1 Seed nucellus-specific protein [Cucumis melo var. makuwa]1.7e-3868.29Show/hide
Query:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNEN---------YEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYNDDDDRQYNWS
        MTI K L+ +LVVSA+AM LL+NVEGGREMA K+ TAK YP  L++N         YEGYK KE+YECDGYKYKDKDCYEYGNCDKSPYN+D D QYNW 
Subjt:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNEN---------YEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYNDDDDRQYNWS

Query:  PYKKSMSKPKEMAGKYGVHLNFP
        PYKK ++KPKEM  KYGVH ++P
Subjt:  PYKKSMSKPKEMAGKYGVHLNFP

KAE8650853.1 hypothetical protein Csa_001704, partial [Cucumis sativus]5.3e-3263.93Show/hide
Query:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNEN------------------YEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYND
        MTI K LV +L+VSAMAM  L+NVEGGREMALK+ TAK Y   L+EN                  YEGYK KE+YECDGYKY DKDCYEYGNCDKSPYN+
Subjt:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNEN------------------YEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYND

Query:  DDDRQYNWSPYKKSMSKPKEMA
        D D QYNW P KK ++KPKEMA
Subjt:  DDDRQYNWSPYKKSMSKPKEMA

KGN46573.1 hypothetical protein Csa_005092 [Cucumis sativus]4.2e-2962.07Show/hide
Query:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNENYEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPY--NDDDDRQYNWSPYKKSMS
        MT GK LV VL  S +AMM ++NVEG R+M LKEAT      VLNE  E   +++EY+CDGYKYKDKDCY+YGNCDKSPY  +DDDD QYNW+ YK  + 
Subjt:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNENYEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPY--NDDDDRQYNWSPYKKSMS

Query:  KPKEMAGKYGVHLNFP
        KPKE+  KY VH NFP
Subjt:  KPKEMAGKYGVHLNFP

TYK14008.1 Seed nucellus-specific protein [Cucumis melo var. makuwa]1.1e-2665.42Show/hide
Query:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNENYEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYNDDDDRQYNWSPYKKSMSKP
        M IGK LV VL +S + MM ++NVEGGREM LKEAT     HV NEN + YK KEE  CDGYKYKDKDCYEYGNC KSPY D DD QYNW+ + K + KP
Subjt:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNENYEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYNDDDDRQYNWSPYKKSMSKP

Query:  KEMAGKY
        KEM  KY
Subjt:  KEMAGKY

TrEMBL top hitse value%identityAlignment
A0A0A0KAR7 Uncharacterized protein2.0e-2962.07Show/hide
Query:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNENYEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPY--NDDDDRQYNWSPYKKSMS
        MT GK LV VL  S +AMM ++NVEG R+M LKEAT      VLNE  E   +++EY+CDGYKYKDKDCY+YGNCDKSPY  +DDDD QYNW+ YK  + 
Subjt:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNENYEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPY--NDDDDRQYNWSPYKKSMS

Query:  KPKEMAGKYGVHLNFP
        KPKE+  KY VH NFP
Subjt:  KPKEMAGKYGVHLNFP

A0A0A0L8T2 Seed nucellus-specific protein3.8e-3662.88Show/hide
Query:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNEN------------------YEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYND
        MTI K LV +L+VSAMAM  L+NVEGGREMALK+ TAK Y   L+EN                  YEGYK KE+YECDGYKY DKDCYEYGNCDKSPYN+
Subjt:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNEN------------------YEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYND

Query:  DDDRQYNWSPYKKSMSKPKEMAGKYGVHLNFP
        D D QYNW P KK ++KPKEMA KYG H ++P
Subjt:  DDDRQYNWSPYKKSMSKPKEMAGKYGVHLNFP

A0A5A7VLH5 Seed nucellus-specific protein8.3e-3968.29Show/hide
Query:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNEN---------YEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYNDDDDRQYNWS
        MTI K L+ +LVVSA+AM LL+NVEGGREMA K+ TAK YP  L++N         YEGYK KE+YECDGYKYKDKDCYEYGNCDKSPYN+D D QYNW 
Subjt:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNEN---------YEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYNDDDDRQYNWS

Query:  PYKKSMSKPKEMAGKYGVHLNFP
        PYKK ++KPKEM  KYGVH ++P
Subjt:  PYKKSMSKPKEMAGKYGVHLNFP

A0A5D3CS37 Seed nucellus-specific protein5.6e-2765.42Show/hide
Query:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNENYEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYNDDDDRQYNWSPYKKSMSKP
        M IGK LV VL +S + MM ++NVEGGREM LKEAT     HV NEN + YK KEE  CDGYKYKDKDCYEYGNC KSPY D DD QYNW+ + K + KP
Subjt:  MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNENYEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYNDDDDRQYNWSPYKKSMSKP

Query:  KEMAGKY
        KEM  KY
Subjt:  KEMAGKY

O22351 Seed nucellus-specific protein7.2e-4379.65Show/hide
Query:  IGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNENYEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYN-DDDDRQYNWSPYKKSMSKPK
        +GK LV +LV+SA+AM LL+NVEGGREM LKEATA AYPHVLNE YEGYK KE+YECDGYKYKDK+CYEYGNCDKSPYN ++DDRQYN SPYKK + KPK
Subjt:  IGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNENYEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYN-DDDDRQYNWSPYKKSMSKPK

Query:  EMAGKYGVHLNFP
        EMA KYGVH NFP
Subjt:  EMAGKYGVHLNFP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACGATCGGTAAGTTTCTCGTCGTCGTGCTCGTAGTCTCCGCAATGGCAATGATGCTACTAAAAAATGTTGAAGGAGGAAGAGAGATGGCTCTGAAGGAAGCAACTGC
AAAAGCTTATCCCCATGTTTTAAATGAAAATTATGAAGGATACAAATCTAAAGAGGAATATGAGTGTGATGGATACAAATACAAAGATAAAGATTGCTATGAATATGGTA
ACTGTGACAAATCTCCCTACAATGACGACGATGACCGTCAATACAACTGGAGTCCGTATAAGAAATCAATGTCAAAGCCGAAAGAGATGGCCGGAAAGTATGGAGTTCAC
CTGAATTTCCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACGATCGGTAAGTTTCTCGTCGTCGTGCTCGTAGTCTCCGCAATGGCAATGATGCTACTAAAAAATGTTGAAGGAGGAAGAGAGATGGCTCTGAAGGAAGCAACTGC
AAAAGCTTATCCCCATGTTTTAAATGAAAATTATGAAGGATACAAATCTAAAGAGGAATATGAGTGTGATGGATACAAATACAAAGATAAAGATTGCTATGAATATGGTA
ACTGTGACAAATCTCCCTACAATGACGACGATGACCGTCAATACAACTGGAGTCCGTATAAGAAATCAATGTCAAAGCCGAAAGAGATGGCCGGAAAGTATGGAGTTCAC
CTGAATTTCCCTTGA
Protein sequenceShow/hide protein sequence
MTIGKFLVVVLVVSAMAMMLLKNVEGGREMALKEATAKAYPHVLNENYEGYKSKEEYECDGYKYKDKDCYEYGNCDKSPYNDDDDRQYNWSPYKKSMSKPKEMAGKYGVH
LNFP