; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G011290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G011290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPoly(A)-specific ribonuclease
Genome locationchr05:19071176..19072064
RNA-Seq ExpressionLsi05G011290
SyntenyLsi05G011290
Gene Ontology termsGO:0016070 - RNA metabolic process (biological process)
GO:0005622 - intracellular (cellular component)
GO:0030014 - CCR4-NOT complex (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0004535 - poly(A)-specific ribonuclease activity (molecular function)
InterPro domainsIPR006941 - Ribonuclease CAF1
IPR012337 - Ribonuclease H-like superfamily
IPR036397 - Ribonuclease H superfamily
IPR039637 - CCR4-NOT transcription complex subunit 7/8/Pop2


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_022928830.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]2.7e-6556.08Show/hide
Query:  WKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRDFDQISDMEGVSS
        WKREVWS NL EE EL+K YL +FPIVAIDTEFPG     +      +EEFY CLQFNVNRL ILQLGLT+ D+ G IGMTWEFNF+DFDQIS+MEGV S
Subjt:  WKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRDFDQISDMEGVSS

Query:  LEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFA---------ITVLQRLAR------------
        L+ FLKNKGF+F KLRS GI P+EF + F+P++R G IQ WITFHG YDIAYLMK  +I SM TSM+ FA         +T L+ +AR            
Subjt:  LEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFA---------ITVLQRLAR------------

Query:  RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR
        ++L                  SLLTASVYA MK + K++  + EGFLYGLP+PI+
Subjt:  RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR

XP_022963784.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]9.3e-6655.47Show/hide
Query:  KTSGESRISPSDWKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRD
        K  GE  I    WKR+VWS NL EE EL+KQ L +FPIVAIDTEFPG     +      +EEFY CLQFNVNRL ILQLGLT+ ++ G IGMTWEFNFRD
Subjt:  KTSGESRISPSDWKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRD

Query:  FDQISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAITV---------------
        FD+IS+MEGV SL+ FLKNKGF+F  LRS GI PEEFG  F PILR G I  WITFHG YDIAYLMK  +IR M TSM+ FAIT                
Subjt:  FDQISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAITV---------------

Query:  ---------LQRLAR-------------RQLSLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR
                 L++LA+                SLLTASVYA MK + K++ ++ EGFLYGLP+PI+
Subjt:  ---------LQRLAR-------------RQLSLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR

XP_022963785.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita moschata]8.7e-6453.79Show/hide
Query:  GESRISPSDWKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRDFDQ
        GE       W+R+VWS NL EE EL++Q L +FPIVA+DTEFPG     +      +EEFY CLQFNVNRL ILQLGLT+ ++ G IGMTWEFNF+DFD+
Subjt:  GESRISPSDWKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRDFDQ

Query:  ISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAITV---------LQRLAR---
        IS+MEGV SL+ FLKNKGF+F  LRS GI PEEFG+ F PILR G I  WITFHG YDIAYLMKL +I  M TSM+ FAIT          L+ +AR   
Subjt:  ISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAITV---------LQRLAR---

Query:  ---------RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR
                 ++L                  SLLTASVYA MK + K+++ + EGFLYGLP+PI+
Subjt:  ---------RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR

XP_022967647.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita maxima]3.0e-6454.68Show/hide
Query:  KTSGESRISPSDWKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRD
        K  GE+ I    WKR+VWS NL EE EL+K  L +FPIVA+DTEFPG   C        +EEFY CLQFNVNRL ILQLGLT+ DE G IGMTWEFNF+D
Subjt:  KTSGESRISPSDWKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRD

Query:  FDQISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAI---------TVLQRLAR
        FD+IS+MEGV SL+ FLKNKGF+F  LRS GI PEEF + F PILR G IQ WITFHG YDIAYLMK  +I  M TSM+ FAI         T L+ +AR
Subjt:  FDQISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAI---------TVLQRLAR

Query:  ------------RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR
                    ++L                  SLLTASVYA M+ + K+   + EGFLYGLP+PI+
Subjt:  ------------RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR

XP_023550519.1 putative CCR4-associated factor 1 homolog 8 [Cucurbita pepo subsp. pepo]3.9e-6456.08Show/hide
Query:  WKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRDFDQISDMEGVSS
        WKREVWS NL EE EL+K YL +FPIVA+DTEFPG     +      +EEFY CLQFNVNRL ILQLGLT+ DE G IGMTWEFNF+DFD+IS+MEGV S
Subjt:  WKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRDFDQISDMEGVSS

Query:  LEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAI---------TVLQRLAR------------
        L+ FLKNKGF+F KLRS GI PEEF + F P++R   IQ WITFHG YDIAYLMK  +I SM TSM+ FAI         T L+ +AR            
Subjt:  LEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAI---------TVLQRLAR------------

Query:  RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR
        ++L                  SLLTASVYA MK + K++  + EGFLYGLP+PI+
Subjt:  RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR

TrEMBL top hitse value%identityAlignment
A0A6J1ESM7 Poly(A)-specific ribonuclease1.3e-6556.08Show/hide
Query:  WKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRDFDQISDMEGVSS
        WKREVWS NL EE EL+K YL +FPIVAIDTEFPG     +      +EEFY CLQFNVNRL ILQLGLT+ D+ G IGMTWEFNF+DFDQIS+MEGV S
Subjt:  WKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRDFDQISDMEGVSS

Query:  LEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFA---------ITVLQRLAR------------
        L+ FLKNKGF+F KLRS GI P+EF + F+P++R G IQ WITFHG YDIAYLMK  +I SM TSM+ FA         +T L+ +AR            
Subjt:  LEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFA---------ITVLQRLAR------------

Query:  RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR
        ++L                  SLLTASVYA MK + K++  + EGFLYGLP+PI+
Subjt:  RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR

A0A6J1HIZ7 Poly(A)-specific ribonuclease4.2e-6453.79Show/hide
Query:  GESRISPSDWKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRDFDQ
        GE       W+R+VWS NL EE EL++Q L +FPIVA+DTEFPG     +      +EEFY CLQFNVNRL ILQLGLT+ ++ G IGMTWEFNF+DFD+
Subjt:  GESRISPSDWKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRDFDQ

Query:  ISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAITV---------LQRLAR---
        IS+MEGV SL+ FLKNKGF+F  LRS GI PEEFG+ F PILR G I  WITFHG YDIAYLMKL +I  M TSM+ FAIT          L+ +AR   
Subjt:  ISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAITV---------LQRLAR---

Query:  ---------RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR
                 ++L                  SLLTASVYA MK + K+++ + EGFLYGLP+PI+
Subjt:  ---------RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR

A0A6J1HL76 Poly(A)-specific ribonuclease4.5e-6655.47Show/hide
Query:  KTSGESRISPSDWKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRD
        K  GE  I    WKR+VWS NL EE EL+KQ L +FPIVAIDTEFPG     +      +EEFY CLQFNVNRL ILQLGLT+ ++ G IGMTWEFNFRD
Subjt:  KTSGESRISPSDWKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRD

Query:  FDQISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAITV---------------
        FD+IS+MEGV SL+ FLKNKGF+F  LRS GI PEEFG  F PILR G I  WITFHG YDIAYLMK  +IR M TSM+ FAIT                
Subjt:  FDQISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAITV---------------

Query:  ---------LQRLAR-------------RQLSLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR
                 L++LA+                SLLTASVYA MK + K++ ++ EGFLYGLP+PI+
Subjt:  ---------LQRLAR-------------RQLSLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR

A0A6J1HRD6 Poly(A)-specific ribonuclease1.5e-6454.68Show/hide
Query:  KTSGESRISPSDWKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRD
        K  GE+ I    WKR+VWS NL EE EL+K  L +FPIVA+DTEFPG   C        +EEFY CLQFNVNRL ILQLGLT+ DE G IGMTWEFNF+D
Subjt:  KTSGESRISPSDWKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRD

Query:  FDQISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAI---------TVLQRLAR
        FD+IS+MEGV SL+ FLKNKGF+F  LRS GI PEEF + F PILR G IQ WITFHG YDIAYLMK  +I  M TSM+ FAI         T L+ +AR
Subjt:  FDQISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAI---------TVLQRLAR

Query:  ------------RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR
                    ++L                  SLLTASVYA M+ + K+   + EGFLYGLP+PI+
Subjt:  ------------RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR

A0A6J1HSR3 Poly(A)-specific ribonuclease4.2e-6454.68Show/hide
Query:  KTSGESRISPSDWKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRD
        K  GE+ I    WKR+VWS NL EE EL+K  L +FPIVA+DTEFPG   C        +EEFY CLQFNVNRL ILQLGLT+ DE G IGMTWEFNF+D
Subjt:  KTSGESRISPSDWKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMTWEFNFRD

Query:  FDQISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAI---------TVLQRLAR
        FD+IS+MEGV SL+ FLKNKGF+F  LRS GI PEEF + F PILR G IQ WITFHG YDIAYLMK  +I  M TSM+ FAI         T L+ +AR
Subjt:  FDQISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAI---------TVLQRLAR

Query:  ------------RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR
                    ++L                  SLLTASVYA M+ + K+   + EGFLYGLP+PI+
Subjt:  ------------RQL------------------SLLTASVYANMKTLFKLQESLSEGFLYGLPHPIR

SwissProt top hitse value%identityAlignment
Q9FMS6 Probable CCR4-associated factor 1 homolog 117.0e-2435.2Show/hide
Query:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQK--EEEFYHCLQFNVNRLRILQLGLTVCDEKGNI---------GMTWEFNFRDFDQ
        R+VW+ NL  E +L++  +  +P +++DTEFPG+      D L++      Y+ L+ NV+ L ++Q+GLT+ D  GN+            WEFNFRDFD 
Subjt:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQK--EEEFYHCLQFNVNRLRILQLGLTVCDEKGNI---------GMTWEFNFRDFDQ

Query:  ISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-WITFHGFYDIAYLMKLLDIRSMLTSMAAF
          D     S+E  L+  G DFE+ R  G+  E F +L      I    + W+TFH  YD  YL+K+L  R +  ++  F
Subjt:  ISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-WITFHGFYDIAYLMKLLDIRSMLTSMAAF

Q9LXM2 Probable CCR4-associated factor 1 homolog 92.0e-2638.2Show/hide
Query:  REVWSENLREETELLKQYLPKFPIVAIDTEFPG-IFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNI---------GMTWEFNFRDFDQI
        REVW+ENL  E EL+ + +  +P +++DTEFPG IF  D   T    ++ Y  L+ NV+ L ++Q+GLT+ D  GN+         G  WEFNFRDFD  
Subjt:  REVWSENLREETELLKQYLPKFPIVAIDTEFPG-IFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNI---------GMTWEFNFRDFDQI

Query:  SDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-WITFHGFYDIAYLMKLLDIRSMLTSMAAF
         D     S+E  L+ +G DFE+   +G+  E F +L      +   ++ W+TFH  YD  YLMK+L  R +  ++  F
Subjt:  SDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-WITFHGFYDIAYLMKLLDIRSMLTSMAAF

Q9S9P2 Probable CCR4-associated factor 1 homolog 28.3e-2537.63Show/hide
Query:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEF-------YHCLQFNVNRLRILQLGLTVCDEKGNI-------GMTWEFNFRD
        REVW+ NL +E  L++Q +  FP VA+DTEFPGI +C           +       Y  L+ NVN L+++QLGLT+ DEKGN+          W+FNFR+
Subjt:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEF-------YHCLQFNVNRLRILQLGLTVCDEKGNI-------GMTWEFNFRD

Query:  FDQISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-----WITFHGFYDIAYLMKLLDIRSMLTSMAAF
        F+ ISDM  + S+E  L+    D EK    G+  + F +L    L   G+ +     W+TFH  YD  YL+KLL  + +   ++ F
Subjt:  FDQISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-----WITFHGFYDIAYLMKLLDIRSMLTSMAAF

Q9SAI2 Probable CCR4-associated factor 1 homolog 62.6e-2639.11Show/hide
Query:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIG-------MTWEFNFRDFDQISDM
        REVW++NL+EE +L++  +  FP VA+DTEFPGI +          +  Y  L+ NVN L+++QLGLT  +E+GN+          W+FNFR+FD  SD+
Subjt:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIG-------MTWEFNFRDFDQISDM

Query:  EGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-----WITFHGFYDIAYLMKLLDIRSMLTSMAAF
          + S+E  LK  G D  K   +GI  + F +L    L   GI +     W+TFH  YD  YL+KLL  +++  S   F
Subjt:  EGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-----WITFHGFYDIAYLMKLLDIRSMLTSMAAF

Q9SKZ2 Probable CCR4-associated factor 1 homolog 74.0e-2737.61Show/hide
Query:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEF-YHCLQFNVNRLRILQLGLTVCDEKGNIG--------MTWEFNFRDFDQIS
        REVW++NL  E  L+++ +  FP VA+DTEFPGI +C    T +   E+ Y  L+ NVN L+++QLGLT  DEKGN+           W+FNFR+FD  S
Subjt:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEF-YHCLQFNVNRLRILQLGLTVCDEKGNIG--------MTWEFNFRDFDQIS

Query:  DMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-----WITFHGFYDIAYLMKLLDIRSMLTSMAAFAITVLQRLARRQLSLLTAS
        D+    S+E  L+  G DF K    GI  + F +L    L   GI +     W+TFH  YD  YL+KLL  +++  +   F            +S+    
Subjt:  DMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-----WITFHGFYDIAYLMKLLDIRSMLTSMAAFAITVLQRLARRQLSLLTAS

Query:  VYANMKTLFKLQESLSEG
        VY ++K L K   SL  G
Subjt:  VYANMKTLFKLQESLSEG

Arabidopsis top hitse value%identityAlignment
AT1G80780.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-2739.11Show/hide
Query:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIG-------MTWEFNFRDFDQISDM
        REVW++NL+EE +L++  +  FP VA+DTEFPGI +          +  Y  L+ NVN L+++QLGLT  +E+GN+          W+FNFR+FD  SD+
Subjt:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIG-------MTWEFNFRDFDQISDM

Query:  EGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-----WITFHGFYDIAYLMKLLDIRSMLTSMAAF
          + S+E  LK  G D  K   +GI  + F +L    L   GI +     W+TFH  YD  YL+KLL  +++  S   F
Subjt:  EGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-----WITFHGFYDIAYLMKLLDIRSMLTSMAAF

AT1G80780.2 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-2739.11Show/hide
Query:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIG-------MTWEFNFRDFDQISDM
        REVW++NL+EE +L++  +  FP VA+DTEFPGI +          +  Y  L+ NVN L+++QLGLT  +E+GN+          W+FNFR+FD  SD+
Subjt:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIG-------MTWEFNFRDFDQISDM

Query:  EGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-----WITFHGFYDIAYLMKLLDIRSMLTSMAAF
          + S+E  LK  G D  K   +GI  + F +L    L   GI +     W+TFH  YD  YL+KLL  +++  S   F
Subjt:  EGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-----WITFHGFYDIAYLMKLLDIRSMLTSMAAF

AT1G80780.3 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.8e-2739.11Show/hide
Query:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIG-------MTWEFNFRDFDQISDM
        REVW++NL+EE +L++  +  FP VA+DTEFPGI +          +  Y  L+ NVN L+++QLGLT  +E+GN+          W+FNFR+FD  SD+
Subjt:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIG-------MTWEFNFRDFDQISDM

Query:  EGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-----WITFHGFYDIAYLMKLLDIRSMLTSMAAF
          + S+E  LK  G D  K   +GI  + F +L    L   GI +     W+TFH  YD  YL+KLL  +++  S   F
Subjt:  EGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-----WITFHGFYDIAYLMKLLDIRSMLTSMAAF

AT2G32070.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein2.8e-2837.61Show/hide
Query:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEF-YHCLQFNVNRLRILQLGLTVCDEKGNIG--------MTWEFNFRDFDQIS
        REVW++NL  E  L+++ +  FP VA+DTEFPGI +C    T +   E+ Y  L+ NVN L+++QLGLT  DEKGN+           W+FNFR+FD  S
Subjt:  REVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEF-YHCLQFNVNRLRILQLGLTVCDEKGNIG--------MTWEFNFRDFDQIS

Query:  DMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-----WITFHGFYDIAYLMKLLDIRSMLTSMAAFAITVLQRLARRQLSLLTAS
        D+    S+E  L+  G DF K    GI  + F +L    L   GI +     W+TFH  YD  YL+KLL  +++  +   F            +S+    
Subjt:  DMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-----WITFHGFYDIAYLMKLLDIRSMLTSMAAFAITVLQRLARRQLSLLTAS

Query:  VYANMKTLFKLQESLSEG
        VY ++K L K   SL  G
Subjt:  VYANMKTLFKLQESLSEG

AT3G44260.1 Polynucleotidyl transferase, ribonuclease H-like superfamily protein1.4e-2738.2Show/hide
Query:  REVWSENLREETELLKQYLPKFPIVAIDTEFPG-IFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNI---------GMTWEFNFRDFDQI
        REVW+ENL  E EL+ + +  +P +++DTEFPG IF  D   T    ++ Y  L+ NV+ L ++Q+GLT+ D  GN+         G  WEFNFRDFD  
Subjt:  REVWSENLREETELLKQYLPKFPIVAIDTEFPG-IFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNI---------GMTWEFNFRDFDQI

Query:  SDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-WITFHGFYDIAYLMKLLDIRSMLTSMAAF
         D     S+E  L+ +G DFE+   +G+  E F +L      +   ++ W+TFH  YD  YLMK+L  R +  ++  F
Subjt:  SDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQI-WITFHGFYDIAYLMKLLDIRSMLTSMAAF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAATCAGATAGGGAAATCGCCTGAAAGAAATCAGAGAAGAAAGAATAAGACAAGTGGAGAATCGCGGATCAGTCCATCCGATTGGAAACGAGAGGTTTGGTCTGA
GAATCTCCGGGAAGAAACAGAGCTTCTGAAACAATATCTTCCAAAATTTCCGATAGTCGCCATTGATACAGAATTTCCAGGTATATTTATATGTGATTTCTTCGATACAC
TCCAAAAGGAGGAAGAATTTTACCATTGCCTTCAATTCAATGTGAATCGATTGAGAATACTTCAATTGGGTCTCACAGTATGTGACGAGAAGGGAAATATAGGAATGACT
TGGGAGTTTAATTTCAGAGATTTCGATCAGATTTCCGATATGGAAGGGGTTTCTTCGTTGGAGTTCTTTTTGAAGAACAAAGGTTTTGATTTTGAGAAATTGAGAAGCAA
TGGAATTGTGCCAGAGGAATTTGGTAAACTGTTCGAACCCATTCTTCGAATTGGTGGAATCCAAATCTGGATTACCTTTCATGGATTTTACGACATTGCTTATCTTATGA
AGCTTCTCGATATTAGATCTATGCTGACTTCCATGGCTGCCTTTGCTATCACTGTACTGCAACGGCTTGCTCGACGGCAACTTAGTTTGCTCACGGCCTCTGTTTATGCC
AATATGAAGACCCTGTTCAAGCTCCAGGAAAGCCTCTCTGAAGGCTTTTTGTACGGATTGCCTCACCCGATTCGAGCTCTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAATCAGATAGGGAAATCGCCTGAAAGAAATCAGAGAAGAAAGAATAAGACAAGTGGAGAATCGCGGATCAGTCCATCCGATTGGAAACGAGAGGTTTGGTCTGA
GAATCTCCGGGAAGAAACAGAGCTTCTGAAACAATATCTTCCAAAATTTCCGATAGTCGCCATTGATACAGAATTTCCAGGTATATTTATATGTGATTTCTTCGATACAC
TCCAAAAGGAGGAAGAATTTTACCATTGCCTTCAATTCAATGTGAATCGATTGAGAATACTTCAATTGGGTCTCACAGTATGTGACGAGAAGGGAAATATAGGAATGACT
TGGGAGTTTAATTTCAGAGATTTCGATCAGATTTCCGATATGGAAGGGGTTTCTTCGTTGGAGTTCTTTTTGAAGAACAAAGGTTTTGATTTTGAGAAATTGAGAAGCAA
TGGAATTGTGCCAGAGGAATTTGGTAAACTGTTCGAACCCATTCTTCGAATTGGTGGAATCCAAATCTGGATTACCTTTCATGGATTTTACGACATTGCTTATCTTATGA
AGCTTCTCGATATTAGATCTATGCTGACTTCCATGGCTGCCTTTGCTATCACTGTACTGCAACGGCTTGCTCGACGGCAACTTAGTTTGCTCACGGCCTCTGTTTATGCC
AATATGAAGACCCTGTTCAAGCTCCAGGAAAGCCTCTCTGAAGGCTTTTTGTACGGATTGCCTCACCCGATTCGAGCTCTCTGA
Protein sequenceShow/hide protein sequence
MKNQIGKSPERNQRRKNKTSGESRISPSDWKREVWSENLREETELLKQYLPKFPIVAIDTEFPGIFICDFFDTLQKEEEFYHCLQFNVNRLRILQLGLTVCDEKGNIGMT
WEFNFRDFDQISDMEGVSSLEFFLKNKGFDFEKLRSNGIVPEEFGKLFEPILRIGGIQIWITFHGFYDIAYLMKLLDIRSMLTSMAAFAITVLQRLARRQLSLLTASVYA
NMKTLFKLQESLSEGFLYGLPHPIRAL