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Lsi05G011300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G011300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSeed nucellus-specific protein
Genome locationchr05:19077280..19082932
RNA-Seq ExpressionLsi05G011300
SyntenyLsi05G011300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
AAB82329.1 seed nucellus-specific protein [Citrullus lanatus]3.3e-3779.61Show/hide
Query:  MGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYH-DDDDRQYNWSPYKKSMPKSK
        +GK LV +LV+SA+ M LLENVEGGREM LKEATA AYPHVLNE YEGYKPKE+YECDGYKYKDK+CYEYGNCDKSPY+ ++DDRQYN SPYKK +PK K
Subjt:  MGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYH-DDDDRQYNWSPYKKSMPKSK

Query:  EMA
        EMA
Subjt:  EMA

KAA0068070.1 Seed nucellus-specific protein [Cucumis melo var. makuwa]1.1e-3267.86Show/hide
Query:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNEN---------YEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYHDDDDRQYNWS
        MT+ K L+ +LVVSA+ M LLENVEGGREMA K+ TAK YP  L++N         YEGYKPKE+YECDGYKYKDKDCYEYGNCDKSPY++D D QYNW 
Subjt:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNEN---------YEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYHDDDDRQYNWS

Query:  PYKKSMPKSKEM
        PYKK + K KEM
Subjt:  PYKKSMPKSKEM

KAE8650853.1 hypothetical protein Csa_001704, partial [Cucumis sativus]1.7e-3062.3Show/hide
Query:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNEN------------------YEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYHD
        MT+ K LV +L+VSAM M  LENVEGGREMALK+ TAK Y   L+EN                  YEGYKPKE+YECDGYKY DKDCYEYGNCDKSPY++
Subjt:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNEN------------------YEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYHD

Query:  DDDRQYNWSPYKKSMPKSKEMA
        D D QYNW P KK + K KEMA
Subjt:  DDDRQYNWSPYKKSMPKSKEMA

KGN46573.1 hypothetical protein Csa_005092 [Cucumis sativus]4.2e-2461.9Show/hide
Query:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPY--HDDDDRQYNWSPYKKSMP
        MT GK LV VL  S + MM +ENVEG R+M LKEAT      VLNE  E    ++EY+CDGYKYKDKDCY+YGNCDKSPY   DDDD QYNW+ YK  +P
Subjt:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPY--HDDDDRQYNWSPYKKSMP

Query:  KSKEM
        K KE+
Subjt:  KSKEM

TYK14008.1 Seed nucellus-specific protein [Cucumis melo var. makuwa]1.2e-2666.99Show/hide
Query:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYHDDDDRQYNWSPYKKSMPKS
        M +GK LV VL +S + MM +ENVEGGREM LKEAT     HV NEN + YKPKEE  CDGYKYKDKDCYEYGNC KSPY D DD QYNW+ + K +PK 
Subjt:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYHDDDDRQYNWSPYKKSMPKS

Query:  KEM
        KEM
Subjt:  KEM

TrEMBL top hitse value%identityAlignment
A0A0A0KAR7 Uncharacterized protein2.0e-2461.9Show/hide
Query:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPY--HDDDDRQYNWSPYKKSMP
        MT GK LV VL  S + MM +ENVEG R+M LKEAT      VLNE  E    ++EY+CDGYKYKDKDCY+YGNCDKSPY   DDDD QYNW+ YK  +P
Subjt:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPY--HDDDDRQYNWSPYKKSMP

Query:  KSKEM
        K KE+
Subjt:  KSKEM

A0A0A0L8T2 Seed nucellus-specific protein8.4e-3162.3Show/hide
Query:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNEN------------------YEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYHD
        MT+ K LV +L+VSAM M  LENVEGGREMALK+ TAK Y   L+EN                  YEGYKPKE+YECDGYKY DKDCYEYGNCDKSPY++
Subjt:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNEN------------------YEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYHD

Query:  DDDRQYNWSPYKKSMPKSKEMA
        D D QYNW P KK + K KEMA
Subjt:  DDDRQYNWSPYKKSMPKSKEMA

A0A5A7VLH5 Seed nucellus-specific protein5.3e-3367.86Show/hide
Query:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNEN---------YEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYHDDDDRQYNWS
        MT+ K L+ +LVVSA+ M LLENVEGGREMA K+ TAK YP  L++N         YEGYKPKE+YECDGYKYKDKDCYEYGNCDKSPY++D D QYNW 
Subjt:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNEN---------YEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYHDDDDRQYNWS

Query:  PYKKSMPKSKEM
        PYKK + K KEM
Subjt:  PYKKSMPKSKEM

A0A5D3CS37 Seed nucellus-specific protein5.7e-2766.99Show/hide
Query:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYHDDDDRQYNWSPYKKSMPKS
        M +GK LV VL +S + MM +ENVEGGREM LKEAT     HV NEN + YKPKEE  CDGYKYKDKDCYEYGNC KSPY D DD QYNW+ + K +PK 
Subjt:  MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYHDDDDRQYNWSPYKKSMPKS

Query:  KEM
        KEM
Subjt:  KEM

O22351 Seed nucellus-specific protein1.6e-3779.61Show/hide
Query:  MGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYH-DDDDRQYNWSPYKKSMPKSK
        +GK LV +LV+SA+ M LLENVEGGREM LKEATA AYPHVLNE YEGYKPKE+YECDGYKYKDK+CYEYGNCDKSPY+ ++DDRQYN SPYKK +PK K
Subjt:  MGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYH-DDDDRQYNWSPYKKSMPKSK

Query:  EMA
        EMA
Subjt:  EMA

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAATGGGTAAGTTTCTCGTCGTCGTGCTCGTAGTCTCTGCAATGACAATGATGCTACTGGAAAATGTTGAAGGAGGAAGAGAGATGGCTCTGAAGGAAGCAACTGC
AAAAGCTTATCCCCATGTTTTAAATGAAAATTATGAAGGATACAAACCCAAAGAGGAATATGAGTGTGATGGATACAAATACAAAGATAAAGATTGCTATGAATATGGCA
ACTGTGACAAATCTCCCTACCATGACGACGACGACCGTCAATACAACTGGAGTCCGTATAAGAAATCGATGCCAAAGTCGAAAGAGATGGCCGGAAATGTTTACCCTCAG
TCTAGTGTTGAGACTTTATCTGCTGACCAGCCACAATGTGTTGAAAGGAATACTCAGTCACATGAAGTTCCATCAGATTCCTTGTTATCTCCAGATCTTGATGTTACTAC
TGACATGGATTTTGATGTCTCACTTGATGATCCTCCCTTACACACATCCATACAGAACACAAAGGCACTTGTGCTTGTCCTTGGAAGAAAGGTTTGGGTTTTGAAATTTG
GAATTGTCACAAAGGCGCTTGTGCTTGTCCTTGGAAGAAAAGTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAATGGGTAAGTTTCTCGTCGTCGTGCTCGTAGTCTCTGCAATGACAATGATGCTACTGGAAAATGTTGAAGGAGGAAGAGAGATGGCTCTGAAGGAAGCAACTGC
AAAAGCTTATCCCCATGTTTTAAATGAAAATTATGAAGGATACAAACCCAAAGAGGAATATGAGTGTGATGGATACAAATACAAAGATAAAGATTGCTATGAATATGGCA
ACTGTGACAAATCTCCCTACCATGACGACGACGACCGTCAATACAACTGGAGTCCGTATAAGAAATCGATGCCAAAGTCGAAAGAGATGGCCGGAAATGTTTACCCTCAG
TCTAGTGTTGAGACTTTATCTGCTGACCAGCCACAATGTGTTGAAAGGAATACTCAGTCACATGAAGTTCCATCAGATTCCTTGTTATCTCCAGATCTTGATGTTACTAC
TGACATGGATTTTGATGTCTCACTTGATGATCCTCCCTTACACACATCCATACAGAACACAAAGGCACTTGTGCTTGTCCTTGGAAGAAAGGTTTGGGTTTTGAAATTTG
GAATTGTCACAAAGGCGCTTGTGCTTGTCCTTGGAAGAAAAGTTTGA
Protein sequenceShow/hide protein sequence
MTMGKFLVVVLVVSAMTMMLLENVEGGREMALKEATAKAYPHVLNENYEGYKPKEEYECDGYKYKDKDCYEYGNCDKSPYHDDDDRQYNWSPYKKSMPKSKEMAGNVYPQ
SSVETLSADQPQCVERNTQSHEVPSDSLLSPDLDVTTDMDFDVSLDDPPLHTSIQNTKALVLVLGRKVWVLKFGIVTKALVLVLGRKV