; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G011390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G011390
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionE3 ubiquitin-protein ligase CHIP
Genome locationchr05:19146629..19147729
RNA-Seq ExpressionLsi05G011390
SyntenyLsi05G011390
Gene Ontology termsGO:0000209 - protein polyubiquitination (biological process)
GO:0006515 - protein quality control for misfolded or incompletely synthesized proteins (biological process)
GO:0009266 - response to temperature stimulus (biological process)
GO:0009651 - response to salt stress (biological process)
GO:0009737 - response to abscisic acid (biological process)
GO:0043161 - proteasome-mediated ubiquitin-dependent protein catabolic process (biological process)
GO:0045862 - positive regulation of proteolysis (biological process)
GO:0071218 - cellular response to misfolded protein (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0003676 - nucleic acid binding (molecular function)
GO:0051087 - chaperone binding (molecular function)
GO:0061630 - ubiquitin protein ligase activity (molecular function)
InterPro domainsIPR003613 - U box domain
IPR013083 - Zinc finger, RING/FYVE/PHD-type


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0068084.1 E3 ubiquitin-protein ligase CHIP [Cucumis melo var. makuwa]1.7e-6286.21Show/hide
Query:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT
        L+EACEAALEQKYFLDQSELEGFVDEA+IAHRKQLKSLRSVFEKVAEAD+PSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHF K          
Subjt:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT

Query:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD
            VGNFDPITRELLDESQL+PNLAIKEAVQSFLDKHGWAYNT+
Subjt:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD

TYK26068.1 E3 ubiquitin-protein ligase CHIP [Cucumis melo var. makuwa]1.7e-6286.21Show/hide
Query:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT
        L+EACEAALEQKYFLDQSELEGFVDEA+IAHRKQLKSLRSVFEKVAEAD+PSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHF K          
Subjt:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT

Query:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD
            VGNFDPITRELLDESQL+PNLAIKEAVQSFLDKHGWAYNT+
Subjt:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD

XP_016902537.1 PREDICTED: E3 ubiquitin-protein ligase CHIP [Cucumis melo]1.7e-6286.21Show/hide
Query:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT
        L+EACEAALEQKYFLDQSELEGFVDEA+IAHRKQLKSLRSVFEKVAEAD+PSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHF K          
Subjt:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT

Query:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD
            VGNFDPITRELLDESQL+PNLAIKEAVQSFLDKHGWAYNT+
Subjt:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD

XP_022931210.1 E3 ubiquitin-protein ligase CHIP-like [Cucurbita moschata]5.1e-6285.52Show/hide
Query:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT
        L+EACEAALEQKYFLD SELEGFVDEA+IAHRKQLKSLRSVFEKV EADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRK          
Subjt:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT

Query:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD
            VGNFDP+TRELLDESQLVPNLAIKEAV++FLDKHGWAYNTD
Subjt:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD

XP_038886937.1 E3 ubiquitin-protein ligase CHIP isoform X1 [Benincasa hispida]5.1e-6287.5Show/hide
Query:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT
        L+EACEAALEQKYFLDQSELEGFVDEA+IAHR QLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHF K          
Subjt:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT

Query:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNT
            VGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNT
Subjt:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNT

TrEMBL top hitse value%identityAlignment
A0A1S4E2T5 E3 ubiquitin-protein ligase CHIP8.4e-6386.21Show/hide
Query:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT
        L+EACEAALEQKYFLDQSELEGFVDEA+IAHRKQLKSLRSVFEKVAEAD+PSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHF K          
Subjt:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT

Query:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD
            VGNFDPITRELLDESQL+PNLAIKEAVQSFLDKHGWAYNT+
Subjt:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD

A0A5A7VKZ1 E3 ubiquitin-protein ligase CHIP8.4e-6386.21Show/hide
Query:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT
        L+EACEAALEQKYFLDQSELEGFVDEA+IAHRKQLKSLRSVFEKVAEAD+PSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHF K          
Subjt:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT

Query:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD
            VGNFDPITRELLDESQL+PNLAIKEAVQSFLDKHGWAYNT+
Subjt:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD

A0A5D3DR86 E3 ubiquitin-protein ligase CHIP8.4e-6386.21Show/hide
Query:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT
        L+EACEAALEQKYFLDQSELEGFVDEA+IAHRKQLKSLRSVFEKVAEAD+PSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHF K          
Subjt:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT

Query:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD
            VGNFDPITRELLDESQL+PNLAIKEAVQSFLDKHGWAYNT+
Subjt:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD

A0A6J1EYU4 E3 ubiquitin-protein ligase CHIP-like2.5e-6285.52Show/hide
Query:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT
        L+EACEAALEQKYFLD SELEGFVDEA+IAHRKQLKSLRSVFEKV EADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRK          
Subjt:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT

Query:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD
            VGNFDP+TRELLDESQLVPNLAIKEAV++FLDKHGWAYNTD
Subjt:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD

A0A6J1K6X7 E3 ubiquitin-protein ligase CHIP-like2.5e-6285.52Show/hide
Query:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT
        L+EACEAALEQKYFLD SELEGFVDEA+IAHRKQLKSLRSVFEKV EADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRK          
Subjt:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT

Query:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD
            VGNFDP+TRELLDESQLVPNLAIKEAV++FLDKHGWAYNTD
Subjt:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD

SwissProt top hitse value%identityAlignment
Q5ZHY5 E3 ubiquitin-protein ligase CHIP5.0e-2035.88Show/hide
Query:  EQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHVGNFD
        +Q+  +D+S     +   +  H K L  +  +F +V E     ++PDYLC KI+ +++R+P ITPSG+TY+R  I +H ++              VG+FD
Subjt:  EQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHVGNFD

Query:  PITRELLDESQLVPNLAIKEAVQSFLDKHGW
        P+TR  L + QL+PNLA+KE + +F+ ++GW
Subjt:  PITRELLDESQLVPNLAIKEAVQSFLDKHGW

Q9SRS9 E3 ubiquitin-protein ligase CHIP1.9e-4059.15Show/hide
Query:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT
        L+E CEAAL Q+  LD S  E   DEA  AH ++LK+L  VF+K AE D P+EVPDYLCC ITL+I RDPVI+PSGVTYERA IL+H +K          
Subjt:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT

Query:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAY
            VG FDPITRE +D + LVPNLAIKEAV ++L+KH WAY
Subjt:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAY

Q9SVC6 E3 ubiquitin-protein ligase PUB223.7e-0732.56Show/hide
Query:  DAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHVGNFDPITRELLDESQLVPNLAIKEAVQSF
        D   E+P +  C I+LDI++DPVI  +G+TY+R  I     +  +FS +         N  P+T++++ E+ L PN  ++  +QS+
Subjt:  DAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHVGNFDPITRELLDESQLVPNLAIKEAVQSF

Q9UNE7 E3 ubiquitin-protein ligase CHIP8.5e-2040Show/hide
Query:  EAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHVGNFDPITRELLDESQLVPNL
        EAK  H K +  +  +F +V E     ++PDYLC KI+ +++R+P ITPSG+TY+R  I +H ++              VG+FDP+TR  L + QL+PNL
Subjt:  EAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHVGNFDPITRELLDESQLVPNL

Query:  AIKEAVQSFLDKHGW
        A+KE + +F+ ++GW
Subjt:  AIKEAVQSFLDKHGW

Q9WUD1 E3 ubiquitin-protein ligase CHIP8.5e-2040Show/hide
Query:  EAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHVGNFDPITRELLDESQLVPNL
        EAK  H K +  +  +F +V E     ++PDYLC KI+ +++R+P ITPSG+TY+R  I +H ++              VG+FDP+TR  L + QL+PNL
Subjt:  EAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHVGNFDPITRELLDESQLVPNL

Query:  AIKEAVQSFLDKHGW
        A+KE + +F+ ++GW
Subjt:  AIKEAVQSFLDKHGW

Arabidopsis top hitse value%identityAlignment
AT2G45920.1 U-box domain-containing protein1.7e-0730.85Show/hide
Query:  EKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHVGN-FDPITRELLDESQLVPNLAIKEAVQSFL
        ++V+ +D   E P Y  C I+L++++DP +   G TYE   I               +T    G+   P+T   L  ++LVPNLA++ A+Q +L
Subjt:  EKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHVGN-FDPITRELLDESQLVPNLAIKEAVQSFL

AT3G07370.1 carboxyl terminus of HSC70-interacting protein1.4e-4159.15Show/hide
Query:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT
        L+E CEAAL Q+  LD S  E   DEA  AH ++LK+L  VF+K AE D P+EVPDYLCC ITL+I RDPVI+PSGVTYERA IL+H +K          
Subjt:  LREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPT

Query:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAY
            VG FDPITRE +D + LVPNLAIKEAV ++L+KH WAY
Subjt:  TTCHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAY

AT3G11840.1 plant U-box 241.0e-0732.26Show/hide
Query:  VFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHVGNFDPITRELLD-ESQLVPNLAIKEAVQ
        VF ++ + +   E+P+Y  C I+L+I++DPV T SG+TY+R  I+    KV          +C      P+T++ L  +S L PN  ++  +Q
Subjt:  VFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHVGNFDPITRELLD-ESQLVPNLAIKEAVQ

AT3G52450.1 plant U-box 222.6e-0832.56Show/hide
Query:  DAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHVGNFDPITRELLDESQLVPNLAIKEAVQSF
        D   E+P +  C I+LDI++DPVI  +G+TY+R  I     +  +FS +         N  P+T++++ E+ L PN  ++  +QS+
Subjt:  DAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHVGNFDPITRELLDESQLVPNLAIKEAVQSF

AT3G61390.2 RING/U-box superfamily protein5.0e-0730Show/hide
Query:  LEQKYFLDQSELEGF---VDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHV
        L++K  L      G     +E KI  R+  K      E+ A      E P Y  C IT DI+ DP +   G TYE   I   F +     H         
Subjt:  LEQKYFLDQSELEGF---VDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTTCHV

Query:  GNFDPITRELLDESQLVPNLAIKEAVQSFL
            P+  + L  + LVPNLA++ A+Q +L
Subjt:  GNFDPITRELLDESQLVPNLAIKEAVQSFL


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTCAATTTACATGTATTGTTTCTCAGAGAAGCTTGTGAGGCTGCCCTTGAACAAAAATACTTTCTTGACCAATCTGAACTAGAAGGGTTTGTTGATGAAGCCAAAAT
TGCTCACCGGAAACAATTAAAATCGCTAAGAAGTGTGTTTGAAAAAGTTGCCGAGGCAGATGCGCCGTCCGAGGTGCCTGATTATCTTTGCTGTAAAATCACACTCGATA
TTCTACGTGATCCCGTTATTACTCCAAGCGGGGTTACATATGAGAGAGCAGTGATTCTCGACCATTTTCGAAAGGTCGACATTTTCTCGCATCGCGATCCTACTACTACA
TGTCATGTTGGTAACTTCGATCCCATAACACGTGAGCTGCTCGACGAGTCCCAGCTAGTACCAAACTTAGCCATCAAGGAAGCAGTGCAATCATTTCTAGATAAGCATGG
ATGGGCTTATAATACAGATTAA
mRNA sequenceShow/hide mRNA sequence
ATGGTCAATTTACATGTATTGTTTCTCAGAGAAGCTTGTGAGGCTGCCCTTGAACAAAAATACTTTCTTGACCAATCTGAACTAGAAGGGTTTGTTGATGAAGCCAAAAT
TGCTCACCGGAAACAATTAAAATCGCTAAGAAGTGTGTTTGAAAAAGTTGCCGAGGCAGATGCGCCGTCCGAGGTGCCTGATTATCTTTGCTGTAAAATCACACTCGATA
TTCTACGTGATCCCGTTATTACTCCAAGCGGGGTTACATATGAGAGAGCAGTGATTCTCGACCATTTTCGAAAGGTCGACATTTTCTCGCATCGCGATCCTACTACTACA
TGTCATGTTGGTAACTTCGATCCCATAACACGTGAGCTGCTCGACGAGTCCCAGCTAGTACCAAACTTAGCCATCAAGGAAGCAGTGCAATCATTTCTAGATAAGCATGG
ATGGGCTTATAATACAGATTAAAGAACTTTGTATTTTGAATGGGAACTCAATCAAGTTGATGGTTATGCCCTGTCAAGAATGAATGGAAATACTTCGACCCCATCTCGCT
AATGTCGTAATTAACTCCTCGATTTGTCTGTATGGATCGTCGATTACGGTTTGTCGTAAGATATCATGCTTTCCATGACATTCTGAGGCTGTACTGTCAATTAAGTATGT
GAGGTCCTGTCTTTTGATTTGCTCTTGTGCAGATTGTTACTATGAACTTGTTAATCTTCCTGTACAGTTATTACTTAAACCTTTGATTATGGCTTAGTTGTTGGAAGGCT
CTGTTCAGCTGGCATTTCTTCCTTTCTAAAGTTTTGCCTTTAAAGTTGGATAAACTGCCCATTTCCATCATTTTTTTCTTTTCTATTTTTTTTTAAATACCATTTTGATC
CCTCTTTTGGTTCGTGTAATTTAGATTTAGC
Protein sequenceShow/hide protein sequence
MVNLHVLFLREACEAALEQKYFLDQSELEGFVDEAKIAHRKQLKSLRSVFEKVAEADAPSEVPDYLCCKITLDILRDPVITPSGVTYERAVILDHFRKVDIFSHRDPTTT
CHVGNFDPITRELLDESQLVPNLAIKEAVQSFLDKHGWAYNTD