; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G011660 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G011660
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein ABCI7, chloroplastic-like
Genome locationchr05:19599100..19600708
RNA-Seq ExpressionLsi05G011660
SyntenyLsi05G011660
Gene Ontology termsGO:0016226 - iron-sulfur cluster assembly (biological process)
InterPro domainsIPR000825 - SUF system FeS cluster assembly, SufBD
IPR011542 - SUF system FeS cluster assembly, SufD
IPR037284 - SUF system FeS cluster assembly, SufBD superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6571839.1 Protein ABCI7, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]4.1e-5489.26Show/hide
Query:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL
        RLSRHNVHIQQLG ETT E +TLHLS+GNQTQ+LHSSLVLDHPRGYSRQLHKCIVANPQG+AVFDGNVKVNRYAQQT+ G+LT+SLLLEPRATVNVKPNL
Subjt:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL

Query:  QIIADDVKCLHGAAISDLEKT
        QIIADDVKC HGAAISDLE+T
Subjt:  QIIADDVKCLHGAAISDLEKT

XP_004148492.1 protein ABCI7, chloroplastic [Cucumis sativus]3.2e-5489.26Show/hide
Query:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL
        RLSRHNVHIQQLG ETT E +TLHLS+GNQTQ+LHSSLVLDHPRGYSRQLHKCIVANPQG+AVFDGNVKVNRYAQQT+ G+LT+SLLLEPRATVNVKPNL
Subjt:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL

Query:  QIIADDVKCLHGAAISDLEKT
        QIIADDVKC HGAAISDLE+T
Subjt:  QIIADDVKCLHGAAISDLEKT

XP_008465948.1 PREDICTED: protein ABCI7, chloroplastic-like [Cucumis melo]3.2e-5489.26Show/hide
Query:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL
        RLSRHNVHIQQLG ETT E +TLHLS+GNQTQ+LHSSLVLDHPRGYSRQLHKCIVANPQG+AVFDGNVKVNRYAQQT+ G+LT+SLLLEPRATVNVKPNL
Subjt:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL

Query:  QIIADDVKCLHGAAISDLEKT
        QIIADDVKC HGAAISDLE+T
Subjt:  QIIADDVKCLHGAAISDLEKT

XP_022952524.1 protein ABCI7, chloroplastic-like [Cucurbita moschata]4.1e-5489.26Show/hide
Query:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL
        RLSRHNVHIQQLG ETT E +TLHLS+GNQTQ+LHSSLVLDHPRGYSRQLHKCIVANPQG+AVFDGNVKVNRYAQQT+ G+LT+SLLLEPRATVNVKPNL
Subjt:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL

Query:  QIIADDVKCLHGAAISDLEKT
        QIIADDVKC HGAAISDLE+T
Subjt:  QIIADDVKCLHGAAISDLEKT

XP_022971974.1 protein ABCI7, chloroplastic-like [Cucurbita maxima]5.4e-5488.43Show/hide
Query:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL
        RLSRHN+HIQQLG ETT E +TLHLS+GNQTQ+LHSSLVLDHPRGYSRQLHKCIVANPQG+AVFDGNVKVNRYAQQT+ G+LT+SLLLEPRATVNVKPNL
Subjt:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL

Query:  QIIADDVKCLHGAAISDLEKT
        QIIADDVKC HGAAISDLE+T
Subjt:  QIIADDVKCLHGAAISDLEKT

TrEMBL top hitse value%identityAlignment
A0A0A0LEE9 Uncharacterized protein1.5e-5489.26Show/hide
Query:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL
        RLSRHNVHIQQLG ETT E +TLHLS+GNQTQ+LHSSLVLDHPRGYSRQLHKCIVANPQG+AVFDGNVKVNRYAQQT+ G+LT+SLLLEPRATVNVKPNL
Subjt:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL

Query:  QIIADDVKCLHGAAISDLEKT
        QIIADDVKC HGAAISDLE+T
Subjt:  QIIADDVKCLHGAAISDLEKT

A0A1S3CQ30 protein ABCI7, chloroplastic-like1.5e-5489.26Show/hide
Query:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL
        RLSRHNVHIQQLG ETT E +TLHLS+GNQTQ+LHSSLVLDHPRGYSRQLHKCIVANPQG+AVFDGNVKVNRYAQQT+ G+LT+SLLLEPRATVNVKPNL
Subjt:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL

Query:  QIIADDVKCLHGAAISDLEKT
        QIIADDVKC HGAAISDLE+T
Subjt:  QIIADDVKCLHGAAISDLEKT

A0A5D3E5C0 Protein ABCI71.5e-5489.26Show/hide
Query:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL
        RLSRHNVHIQQLG ETT E +TLHLS+GNQTQ+LHSSLVLDHPRGYSRQLHKCIVANPQG+AVFDGNVKVNRYAQQT+ G+LT+SLLLEPRATVNVKPNL
Subjt:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL

Query:  QIIADDVKCLHGAAISDLEKT
        QIIADDVKC HGAAISDLE+T
Subjt:  QIIADDVKCLHGAAISDLEKT

A0A6J1GLY6 protein ABCI7, chloroplastic-like2.0e-5489.26Show/hide
Query:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL
        RLSRHNVHIQQLG ETT E +TLHLS+GNQTQ+LHSSLVLDHPRGYSRQLHKCIVANPQG+AVFDGNVKVNRYAQQT+ G+LT+SLLLEPRATVNVKPNL
Subjt:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL

Query:  QIIADDVKCLHGAAISDLEKT
        QIIADDVKC HGAAISDLE+T
Subjt:  QIIADDVKCLHGAAISDLEKT

A0A6J1IA43 protein ABCI7, chloroplastic-like2.6e-5488.43Show/hide
Query:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL
        RLSRHN+HIQQLG ETT E +TLHLS+GNQTQ+LHSSLVLDHPRGYSRQLHKCIVANPQG+AVFDGNVKVNRYAQQT+ G+LT+SLLLEPRATVNVKPNL
Subjt:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL

Query:  QIIADDVKCLHGAAISDLEKT
        QIIADDVKC HGAAISDLE+T
Subjt:  QIIADDVKCLHGAAISDLEKT

SwissProt top hitse value%identityAlignment
P77689 FeS cluster assembly protein SufD2.0e-1438.98Show/hide
Query:  RHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGY--SRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNLQ
        RHN   Q  G  +T+   +L + + N+  +  +   L+H +G+  SRQLHK IV++ +GRAVF+G + V ++A +T+G     +LL+   A V+ KP L+
Subjt:  RHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGY--SRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNLQ

Query:  IIADDVKCLHGAAISDLE
        I ADDVKC HGA +  ++
Subjt:  IIADDVKCLHGAAISDLE

Q55792 UPF0051 protein slr00761.1e-2247.06Show/hide
Query:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL
        +LSRHN+ + Q    T  EF  L +  G Q  + HS++ L+HP G + QLHKCIV +   +AVF G V V + AQ T   +L ++L+L  +A +N KP L
Subjt:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL

Query:  QIIADDVKCLHGAAISDLE
        QI AD+VKC HGA IS LE
Subjt:  QIIADDVKCLHGAAISDLE

Q9LQK7 Protein ABCI7, chloroplastic2.8e-4570.83Show/hide
Query:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL
        +L RHNVH+QQLG +T  E  T H+ +  QT +LHS ++LDHPRG SRQLHKCIVA+  G+AVFDGNV+VNR+AQQT  G+LT+SLLL+PRATVN+KPNL
Subjt:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL

Query:  QIIADDVKCLHGAAISDLEK
        QIIADDVKC HGAAISDLE+
Subjt:  QIIADDVKCLHGAAISDLEK

Arabidopsis top hitse value%identityAlignment
AT1G32500.1 non-intrinsic ABC protein 62.0e-4670.83Show/hide
Query:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL
        +L RHNVH+QQLG +T  E  T H+ +  QT +LHS ++LDHPRG SRQLHKCIVA+  G+AVFDGNV+VNR+AQQT  G+LT+SLLL+PRATVN+KPNL
Subjt:  RLSRHNVHIQQLGLETTIEFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNL

Query:  QIIADDVKCLHGAAISDLEK
        QIIADDVKC HGAAISDLE+
Subjt:  QIIADDVKCLHGAAISDLEK


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGTCTAGCGTCTCCCTTCTTTCAAGCTAAGGCTGCTATTGCCTGTTGCACATCGCTTGGTTTATATGTACATTTACCCCCCATGAACCCAAGTTTTTTTCTCCTCCA
AATGAGTGAGAGAGTGAGAGTATATGCCCCACAAGGTCGAAAATCCATAAAGCTCACGCTGTTGACACCTCTTGCCTGCCACGATGGATCAAGCTTTGGTCATGTCACAG
GATTGGATTCAGGAATCGACCAGTGCCTACAAGCTTGTGGAGATTATCACTGGCGAAGATTGAGTCGACACAATGTCCATATCCAACAATTGGGACTAGAAACTACGATA
GAGTTTGCAACATTGCATTTATCACTTGGCAATCAAACACAAAATCTACATAGTAGCCTAGTGCTCGACCATCCAAGAGGATATTCTCGACAACTTCATAAATGTATTGT
TGCTAATCCCCAAGGACGAGCTGTATTCGATGGCAACGTAAAAGTCAATAGATATGCACAACAAACAGAAGGAGGAAAACTAACACAGAGTCTTCTTCTGGAACCTCGAG
CGACCGTGAATGTGAAACCTAATCTTCAAATCATTGCTGACGACGTCAAATGTTTGCATGGAGCTGCTATAAGCGACTTGGAAAAGACCTAG
mRNA sequenceShow/hide mRNA sequence
ATGGGTCTAGCGTCTCCCTTCTTTCAAGCTAAGGCTGCTATTGCCTGTTGCACATCGCTTGGTTTATATGTACATTTACCCCCCATGAACCCAAGTTTTTTTCTCCTCCA
AATGAGTGAGAGAGTGAGAGTATATGCCCCACAAGGTCGAAAATCCATAAAGCTCACGCTGTTGACACCTCTTGCCTGCCACGATGGATCAAGCTTTGGTCATGTCACAG
GATTGGATTCAGGAATCGACCAGTGCCTACAAGCTTGTGGAGATTATCACTGGCGAAGATTGAGTCGACACAATGTCCATATCCAACAATTGGGACTAGAAACTACGATA
GAGTTTGCAACATTGCATTTATCACTTGGCAATCAAACACAAAATCTACATAGTAGCCTAGTGCTCGACCATCCAAGAGGATATTCTCGACAACTTCATAAATGTATTGT
TGCTAATCCCCAAGGACGAGCTGTATTCGATGGCAACGTAAAAGTCAATAGATATGCACAACAAACAGAAGGAGGAAAACTAACACAGAGTCTTCTTCTGGAACCTCGAG
CGACCGTGAATGTGAAACCTAATCTTCAAATCATTGCTGACGACGTCAAATGTTTGCATGGAGCTGCTATAAGCGACTTGGAAAAGACCTAG
Protein sequenceShow/hide protein sequence
MGLASPFFQAKAAIACCTSLGLYVHLPPMNPSFFLLQMSERVRVYAPQGRKSIKLTLLTPLACHDGSSFGHVTGLDSGIDQCLQACGDYHWRRLSRHNVHIQQLGLETTI
EFATLHLSLGNQTQNLHSSLVLDHPRGYSRQLHKCIVANPQGRAVFDGNVKVNRYAQQTEGGKLTQSLLLEPRATVNVKPNLQIIADDVKCLHGAAISDLEKT