; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G011840 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G011840
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPentatricopeptide repeat-containing protein
Genome locationchr05:19754060..19757384
RNA-Seq ExpressionLsi05G011840
SyntenyLsi05G011840
Gene Ontology termsGO:0005515 - protein binding (molecular function)
InterPro domainsIPR011990 - Tetratricopeptide-like helical domain superfamily
IPR044646 - Pentatricopeptide repeat-containing protein EMB1417-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
TYK23004.1 pentatricopeptide repeat-containing protein [Cucumis melo var. makuwa]2.7e-14572.28Show/hide
Query:  RMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
        RMLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
Subjt:  RMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE

Query:  NQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKLIK
        NQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLF Q+LESMPRIFFHKMISLYYDRAMHDKLFE                   
Subjt:  NQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKLIK

Query:  KSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKWEY
                                                             VFADMEELGVQPNMAIVT VGN+F ELGM DKYEKLMKKYPPPKWEY
Subjt:  KSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKWEY

Query:  RYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL
        RY+KGKRV+IR+KYL ENGNS NGLSE +K+EHSST  L+EAEITSEDSSLEDDEE+ +DP  ILEDE +  +SNFEHDFMG GQL
Subjt:  RYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL

XP_004140747.2 pentatricopeptide repeat-containing protein At4g21190 [Cucumis sativus]1.3e-14772.63Show/hide
Query:  FICWLRMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKA
        F+   RMLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKA
Subjt:  FICWLRMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKA

Query:  LKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFP
        LKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLF QHLES+PRIFFHKMISLYYD+AMHDKLFE              
Subjt:  LKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFP

Query:  SKLIKKSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPP
                                                                  VFADMEELGVQPNMAIVT VGNVF ELGM DKY+KLMKKYPP
Subjt:  SKLIKKSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPP

Query:  PKWEYRYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL
        PKWEYRY+KGKRV+IR+KYL ENGNSNNGLSEH K+EHSST  ++EAEITSEDSSLEDDE+MSEDP  ILEDE +  +SNFEHDFMG GQL
Subjt:  PKWEYRYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL

XP_016899030.1 PREDICTED: pentatricopeptide repeat-containing protein At4g21190 isoform X1 [Cucumis melo]2.7e-15372.37Show/hide
Query:  LLELKIWISIYRNLLIFVFICWLRMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGAL
        LLEL+I ISI+RNLLIF  ICW RMLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGAL
Subjt:  LLELKIWISIYRNLLIFVFICWLRMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGAL

Query:  DSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHD
        DSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLF Q+LESMPRIFFHKMISLYYDRAMHD
Subjt:  DSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHD

Query:  KLFEFQLHQSQSSNHSFPSKLIKKSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVF
        KLFE                                                                        VFADMEELGVQPNMAIVT VGN+F
Subjt:  KLFEFQLHQSQSSNHSFPSKLIKKSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVF

Query:  HELGMFDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFE
         ELGM DKYEKLMKKYPPPKWEYRY+KGKRV+IR+KYL ENGNS NGLSE +K+EHSST  L+EAEITSEDSSLEDDEE+ +DP  ILEDE +  +SNFE
Subjt:  HELGMFDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFE

Query:  HDFMGFGQL
        HDFMG GQL
Subjt:  HDFMGFGQL

XP_038888232.1 pentatricopeptide repeat-containing protein At4g21190 isoform X1 [Benincasa hispida]8.5e-15576.17Show/hide
Query:  RMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
        RMLTLIYSFPVISKRIESV FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGT+SKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL+TLE
Subjt:  RMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE

Query:  NQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKLIK
        NQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLF QHLESMPRIFFHKMISLYYDRAMHDKLFE                   
Subjt:  NQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKLIK

Query:  KSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKWEY
                                                             VFADMEELGVQPNM IVTMVGNVFHELGM DKYEKLMKKYPPPKWEY
Subjt:  KSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKWEY

Query:  RYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL
        RY+KGKRVRIRSKYLYENGN NN LS+HDK+EHSSTKLLEEAEITSED++LEDD EMSEDP  I +DEC+SKE NFEHDFMGFGQL
Subjt:  RYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL

XP_038888233.1 pentatricopeptide repeat-containing protein At4g21190 isoform X2 [Benincasa hispida]4.2e-15476.1Show/hide
Query:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN
        MLTLIYSFPVISKRIESV FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGT+SKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKAL+TLEN
Subjt:  MLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLEN

Query:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKLIKK
        QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLF QHLESMPRIFFHKMISLYYDRAMHDKLFE                    
Subjt:  QREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKLIKK

Query:  SVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKWEYR
                                                            VFADMEELGVQPNM IVTMVGNVFHELGM DKYEKLMKKYPPPKWEYR
Subjt:  SVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKWEYR

Query:  YVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL
        Y+KGKRVRIRSKYLYENGN NN LS+HDK+EHSSTKLLEEAEITSED++LEDD EMSEDP  I +DEC+SKE NFEHDFMGFGQL
Subjt:  YVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL

TrEMBL top hitse value%identityAlignment
A0A0A0L6Q9 Uncharacterized protein6.4e-14872.63Show/hide
Query:  FICWLRMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKA
        F+   RMLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKA
Subjt:  FICWLRMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKA

Query:  LKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFP
        LKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLF QHLES+PRIFFHKMISLYYD+AMHDKLFE              
Subjt:  LKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFP

Query:  SKLIKKSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPP
                                                                  VFADMEELGVQPNMAIVT VGNVF ELGM DKY+KLMKKYPP
Subjt:  SKLIKKSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPP

Query:  PKWEYRYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL
        PKWEYRY+KGKRV+IR+KYL ENGNSNNGLSEH K+EHSST  ++EAEITSEDSSLEDDE+MSEDP  ILEDE +  +SNFEHDFMG GQL
Subjt:  PKWEYRYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL

A0A1S3AY30 pentatricopeptide repeat-containing protein At4g21190 isoform X22.3e-14572.28Show/hide
Query:  RMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
        RMLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
Subjt:  RMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE

Query:  NQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKLIK
        NQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLF Q+LESMPRIFFHKMISLYYDRAMHDKLFE                   
Subjt:  NQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKLIK

Query:  KSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKWEY
                                                             VFADMEELGVQPNMAIVT VGN+F ELGM DKYEKLMKKYPPPKWEY
Subjt:  KSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKWEY

Query:  RYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL
        RY+KGKRV+IR+KYL ENGNS NGLSE +K+EHSST  L+EAEITSEDSSLEDDEE+ +DP  ILEDE +  +SNFEHDFMG GQL
Subjt:  RYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL

A0A1S4DTK8 pentatricopeptide repeat-containing protein At4g21190 isoform X11.3e-15372.37Show/hide
Query:  LLELKIWISIYRNLLIFVFICWLRMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGAL
        LLEL+I ISI+RNLLIF  ICW RMLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGAL
Subjt:  LLELKIWISIYRNLLIFVFICWLRMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGAL

Query:  DSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHD
        DSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLF Q+LESMPRIFFHKMISLYYDRAMHD
Subjt:  DSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHD

Query:  KLFEFQLHQSQSSNHSFPSKLIKKSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVF
        KLFE                                                                        VFADMEELGVQPNMAIVT VGN+F
Subjt:  KLFEFQLHQSQSSNHSFPSKLIKKSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVF

Query:  HELGMFDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFE
         ELGM DKYEKLMKKYPPPKWEYRY+KGKRV+IR+KYL ENGNS NGLSE +K+EHSST  L+EAEITSEDSSLEDDEE+ +DP  ILEDE +  +SNFE
Subjt:  HELGMFDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFE

Query:  HDFMGFGQL
        HDFMG GQL
Subjt:  HDFMGFGQL

A0A5A7SS06 Pentatricopeptide repeat-containing protein2.3e-14572.28Show/hide
Query:  RMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
        RMLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
Subjt:  RMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE

Query:  NQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKLIK
        NQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLF Q+LESMPRIFFHKMISLYYDRAMHDKLFE                   
Subjt:  NQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKLIK

Query:  KSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKWEY
                                                             VFADMEELGVQPNMAIVT VGN+F ELGM DKYEKLMKKYPPPKWEY
Subjt:  KSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKWEY

Query:  RYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL
        RY+KGKRV+IR+KYL ENGNS NGLSE +K+EHSST  L+EAEITSEDSSLEDDEE+ +DP  ILEDE +  +SNFEHDFMG GQL
Subjt:  RYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL

A0A5D3DHA7 Pentatricopeptide repeat-containing protein1.3e-14572.28Show/hide
Query:  RMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
        RMLTL+Y+FPV SKRIESV FSWC SSSVVCAAKGPRPRYPRVWKT+KRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE
Subjt:  RMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLE

Query:  NQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKLIK
        NQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNAL EDGRLDEAEELWNKLF Q+LESMPRIFFHKMISLYYDRAMHDKLFE                   
Subjt:  NQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKLIK

Query:  KSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKWEY
                                                             VFADMEELGVQPNMAIVT VGN+F ELGM DKYEKLMKKYPPPKWEY
Subjt:  KSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKWEY

Query:  RYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL
        RY+KGKRV+IR+KYL ENGNS NGLSE +K+EHSST  L+EAEITSEDSSLEDDEE+ +DP  ILEDE +  +SNFEHDFMG GQL
Subjt:  RYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL

SwissProt top hitse value%identityAlignment
Q2V3H0 Pentatricopeptide repeat-containing protein At4g18975, chloroplastic2.3e-3342.22Show/hide
Query:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEF--QLHQSQSSNHSFPSKLIKKSVKNLKSYEGYDTWCSRYI
        AE LWN + + H  S+PR  F +MI+LY    +HDK+ E    + + + S     ++ + ++ + L   E       RY+
Subjt:  AEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEF--QLHQSQSSNHSFPSKLIKKSVKNLKSYEGYDTWCSRYI

Q8LG95 Pentatricopeptide repeat-containing protein At4g211903.7e-9251.44Show/hide
Query:  MLTLIYSFP--VISKRIESVK-FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        ML+L YS P  ++  R  S K F+   ++ VVCAA+GPRPR PRVWKT+KRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MLTLIYSFP--VISKRIESVK-FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKL
        LE+++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNALAED RLDEAEELWNKLF +HLE  PR FF+KMIS+YY R MH KLFE                 
Subjt:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKL

Query:  IKKSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKW
                                                               VFADMEELGV+PN+AIV+MVG VF +L M DKYEKLMKKYPPP+W
Subjt:  IKKSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKW

Query:  EYRYVKGKRVRIRSKYLYENGNSNNGL-SEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEH
        E+RY+KG+RV++++K L E      GL S+ DK+++     +E  E   ED  L ++EE  ++ +G  + +  S+E + +H
Subjt:  EYRYVKGKRVRIRSKYLYENGNSNNGL-SEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEH

Arabidopsis top hitse value%identityAlignment
AT4G18975.1 Pentatricopeptide repeat (PPR) superfamily protein1.6e-3442.22Show/hide
Query:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEF--QLHQSQSSNHSFPSKLIKKSVKNLKSYEGYDTWCSRYI
        AE LWN + + H  S+PR  F +MI+LY    +HDK+ E    + + + S     ++ + ++ + L   E       RY+
Subjt:  AEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEF--QLHQSQSSNHSFPSKLIKKSVKNLKSYEGYDTWCSRYI

AT4G18975.2 Pentatricopeptide repeat (PPR) superfamily protein1.6e-3442.22Show/hide
Query:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEF--QLHQSQSSNHSFPSKLIKKSVKNLKSYEGYDTWCSRYI
        AE LWN + + H  S+PR  F +MI+LY    +HDK+ E    + + + S     ++ + ++ + L   E       RY+
Subjt:  AEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEF--QLHQSQSSNHSFPSKLIKKSVKNLKSYEGYDTWCSRYI

AT4G18975.3 Pentatricopeptide repeat (PPR) superfamily protein1.6e-3442.22Show/hide
Query:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEF--QLHQSQSSNHSFPSKLIKKSVKNLKSYEGYDTWCSRYI
        AE LWN + + H  S+PR  F +MI+LY    +HDK+ E    + + + S     ++ + ++ + L   E       RY+
Subjt:  AEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEF--QLHQSQSSNHSFPSKLIKKSVKNLKSYEGYDTWCSRYI

AT4G18975.4 Pentatricopeptide repeat (PPR) superfamily protein1.6e-3442.22Show/hide
Query:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE
        +WK     G+  KA  LV  + GL N KE VYGAL+ ++AWE+EFP+I   KAL+ L  + +W R+IQL KWMLSKGQG TMG+Y  LL A   D R DE
Subjt:  VWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDE

Query:  AEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEF--QLHQSQSSNHSFPSKLIKKSVKNLKSYEGYDTWCSRYI
        AE LWN + + H  S+PR  F +MI+LY    +HDK+ E    + + + S     ++ + ++ + L   E       RY+
Subjt:  AEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEF--QLHQSQSSNHSFPSKLIKKSVKNLKSYEGYDTWCSRYI

AT4G21190.1 Pentatricopeptide repeat (PPR) superfamily protein2.6e-9351.44Show/hide
Query:  MLTLIYSFP--VISKRIESVK-FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT
        ML+L YS P  ++  R  S K F+   ++ VVCAA+GPRPR PRVWKT+KRIGTISKAAK++ C+KGLSNVKEEVYGALDSFIAWELEFPL+ VKKAL  
Subjt:  MLTLIYSFP--VISKRIESVK-FSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVDCVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKT

Query:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKL
        LE+++EWK+IIQ+TKWMLSKGQGRTMG+YF+LLNALAED RLDEAEELWNKLF +HLE  PR FF+KMIS+YY R MH KLFE                 
Subjt:  LENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYYDRAMHDKLFEFQLHQSQSSNHSFPSKL

Query:  IKKSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKW
                                                               VFADMEELGV+PN+AIV+MVG VF +L M DKYEKLMKKYPPP+W
Subjt:  IKKSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELGMFDKYEKLMKKYPPPKW

Query:  EYRYVKGKRVRIRSKYLYENGNSNNGL-SEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEH
        E+RY+KG+RV++++K L E      GL S+ DK+++     +E  E   ED  L ++EE  ++ +G  + +  S+E + +H
Subjt:  EYRYVKGKRVRIRSKYLYENGNSNNGL-SEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEH


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAGTCCCAAGCATCGCTTTCGTCCTCCTCGGCTTCCTACCGCGATTTCGTGCTTCTGCCTGGTTCTTCCTCCTAAGCTCTTAGAGTTGAAAATTTGGATTTCAATTTA
TCGAAATCTATTGATATTTGTTTTCATTTGCTGGCTCAGGATGCTTACTTTGATTTACTCTTTTCCAGTCATATCCAAAAGGATAGAATCTGTTAAATTTTCCTGGTGTG
CAAGCAGTTCAGTTGTATGCGCTGCAAAGGGTCCACGGCCGAGATATCCTCGGGTCTGGAAAACCAAAAAGAGAATTGGGACGATATCCAAGGCAGCAAAGCTTGTTGAT
TGTGTCAAGGGACTGTCTAACGTCAAAGAGGAAGTCTATGGAGCTCTTGATTCCTTCATTGCATGGGAACTAGAGTTTCCTCTTATTACTGTAAAGAAAGCCTTGAAGAC
CTTAGAGAACCAAAGAGAATGGAAGAGGATAATTCAGTTGACGAAATGGATGTTAAGTAAAGGCCAAGGAAGAACAATGGGAAGCTATTTCACGTTATTAAATGCCTTAG
CTGAAGATGGAAGACTTGATGAAGCAGAAGAGCTTTGGAACAAATTGTTTTATCAGCATTTGGAGAGCATGCCTCGCATATTCTTTCATAAAATGATATCCCTGTACTAC
GATCGGGCAATGCACGACAAGTTATTTGAGTTTCAACTGCATCAGTCACAAAGCTCTAACCATTCCTTCCCCTCCAAATTGATTAAAAAAAGTGTTAAAAACTTAAAAAG
TTATGAAGGCTATGATACATGGTGCAGCAGATATATTTTAGGCAATAAATCTCTAAGCATTGCTCCAAGTTATTCTTCAGACTCACGATTGAAAAAGGAAAAAGAAGAGA
TTAAAGTTAAAGCTTACAACTTTCTTGTATTTGCTGATATGGAGGAACTTGGAGTTCAACCAAATATGGCAATTGTCACCATGGTTGGAAATGTCTTCCATGAGTTGGGT
ATGTTCGATAAATATGAAAAGCTGATGAAGAAATATCCCCCACCAAAATGGGAATATCGTTACGTCAAAGGAAAGCGCGTAAGAATACGATCAAAGTATCTGTATGAAAA
TGGTAATTCCAACAATGGTTTAAGTGAGCATGACAAATTGGAACATAGTTCAACGAAGCTGTTGGAGGAAGCTGAAATAACTTCCGAGGATTCCAGTCTTGAAGATGATG
AGGAAATGAGCGAAGATCCAGTTGGAATTCTGGAAGATGAATGTATTTCAAAAGAATCCAATTTTGAGCATGATTTCATGGGGTTTGGGCAATTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGAGTCCCAAGCATCGCTTTCGTCCTCCTCGGCTTCCTACCGCGATTTCGTGCTTCTGCCTGGTTCTTCCTCCTAAGCTCTTAGAGTTGAAAATTTGGATTTCAATTTA
TCGAAATCTATTGATATTTGTTTTCATTTGCTGGCTCAGGATGCTTACTTTGATTTACTCTTTTCCAGTCATATCCAAAAGGATAGAATCTGTTAAATTTTCCTGGTGTG
CAAGCAGTTCAGTTGTATGCGCTGCAAAGGGTCCACGGCCGAGATATCCTCGGGTCTGGAAAACCAAAAAGAGAATTGGGACGATATCCAAGGCAGCAAAGCTTGTTGAT
TGTGTCAAGGGACTGTCTAACGTCAAAGAGGAAGTCTATGGAGCTCTTGATTCCTTCATTGCATGGGAACTAGAGTTTCCTCTTATTACTGTAAAGAAAGCCTTGAAGAC
CTTAGAGAACCAAAGAGAATGGAAGAGGATAATTCAGTTGACGAAATGGATGTTAAGTAAAGGCCAAGGAAGAACAATGGGAAGCTATTTCACGTTATTAAATGCCTTAG
CTGAAGATGGAAGACTTGATGAAGCAGAAGAGCTTTGGAACAAATTGTTTTATCAGCATTTGGAGAGCATGCCTCGCATATTCTTTCATAAAATGATATCCCTGTACTAC
GATCGGGCAATGCACGACAAGTTATTTGAGTTTCAACTGCATCAGTCACAAAGCTCTAACCATTCCTTCCCCTCCAAATTGATTAAAAAAAGTGTTAAAAACTTAAAAAG
TTATGAAGGCTATGATACATGGTGCAGCAGATATATTTTAGGCAATAAATCTCTAAGCATTGCTCCAAGTTATTCTTCAGACTCACGATTGAAAAAGGAAAAAGAAGAGA
TTAAAGTTAAAGCTTACAACTTTCTTGTATTTGCTGATATGGAGGAACTTGGAGTTCAACCAAATATGGCAATTGTCACCATGGTTGGAAATGTCTTCCATGAGTTGGGT
ATGTTCGATAAATATGAAAAGCTGATGAAGAAATATCCCCCACCAAAATGGGAATATCGTTACGTCAAAGGAAAGCGCGTAAGAATACGATCAAAGTATCTGTATGAAAA
TGGTAATTCCAACAATGGTTTAAGTGAGCATGACAAATTGGAACATAGTTCAACGAAGCTGTTGGAGGAAGCTGAAATAACTTCCGAGGATTCCAGTCTTGAAGATGATG
AGGAAATGAGCGAAGATCCAGTTGGAATTCTGGAAGATGAATGTATTTCAAAAGAATCCAATTTTGAGCATGATTTCATGGGGTTTGGGCAATTGTAAATATATATACAT
ATTGTAGTTCCCAGTTGGAATTCGTCATAGTGTAGACTTTTATTTTTTTTTTAATTATTATTTTGTAATTTGAACAGATGGGATGACGTATTGTGATCATAGAGCCTATT
CTCTTTATTTCGGCCTTCAATATTATAATGCCCGATTCAAGATA
Protein sequenceShow/hide protein sequence
MSPKHRFRPPRLPTAISCFCLVLPPKLLELKIWISIYRNLLIFVFICWLRMLTLIYSFPVISKRIESVKFSWCASSSVVCAAKGPRPRYPRVWKTKKRIGTISKAAKLVD
CVKGLSNVKEEVYGALDSFIAWELEFPLITVKKALKTLENQREWKRIIQLTKWMLSKGQGRTMGSYFTLLNALAEDGRLDEAEELWNKLFYQHLESMPRIFFHKMISLYY
DRAMHDKLFEFQLHQSQSSNHSFPSKLIKKSVKNLKSYEGYDTWCSRYILGNKSLSIAPSYSSDSRLKKEKEEIKVKAYNFLVFADMEELGVQPNMAIVTMVGNVFHELG
MFDKYEKLMKKYPPPKWEYRYVKGKRVRIRSKYLYENGNSNNGLSEHDKLEHSSTKLLEEAEITSEDSSLEDDEEMSEDPVGILEDECISKESNFEHDFMGFGQL