CuGenDBv2

Gene ID	Lsi05G011930
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Heat shock protein 83
Genome location	chr05:19805911..19807370
RNA-Seq Expression	Lsi05G011930
Synteny	Lsi05G011930
Gene Ontology terms	GO:0006457 - protein folding (biological process) GO:0005524 - ATP binding (molecular function) GO:0016887 - ATPase activity (molecular function) GO:0051082 - unfolded protein binding (molecular function)
InterPro domains	IPR001404 - Heat shock protein Hsp90 family IPR036890 - Histidine kinase/HSP90-like ATPase superfamily

Homology

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GenBank top hits

e value

%identity

Alignment

KAA8539960.1 hypothetical protein F0562_026652 [Nyssa sinensis]

4.8e-28

54.78

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Query:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG
        MADVKM D ETFAFQAEINQLL                                    + KLDAQ ELFIRIV DKVNKTLSI+DSG+GMTKA+LVNNLG
Subjt:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG

Query:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        TI+R  TKEFMEALQ  ADV+MIGQFGVGFYS     +KV         E  +W+ Q
Subjt:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

MBA0657344.1 hypothetical protein [Gossypium klotzschianum]

8.3e-28

54.14

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Query:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG
        MADVKM D ETFAFQAEINQLL                                    + KLDAQ ELFIR+V DKVNKTLSI+DSG+GMTKA+LVNNLG
Subjt:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG

Query:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        TI+R  TKEFMEALQ  ADV+MIGQFGVGFYS     +KV         E  +W+ Q
Subjt:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

PPD82983.1 hypothetical protein GOBAR_DD20086 [Gossypium barbadense]

8.3e-28

54.14

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Query:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG
        MADVKM D ETFAFQAEINQLL                                    + KLDAQ ELFIR+V DKVNKTLSI+DSG+GMTKA+LVNNLG
Subjt:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG

Query:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        TI+R  TKEFMEALQ  ADV+MIGQFGVGFYS     +KV         E  +W+ Q
Subjt:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

XP_012440101.1 PREDICTED: heat shock protein 83 [Gossypium raimondii]

2.8e-28

54.78

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Query:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG
        MADVKM DVETFAFQAEINQLL                                    + KLDAQ ELFIR+V DKVNKTLSI+DSG+GMTKA+LVNNLG
Subjt:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG

Query:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        TI+R  TKEFMEALQ  ADV+MIGQFGVGFYS     +KV         E  +W+ Q
Subjt:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

XP_038887928.1 heat shock protein 83 [Benincasa hispida]

8.3e-28

55.41

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Query:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG
        MADV+M D ETFAFQAEINQLL                                    + KLDAQ ELFIRIV DKVNKTLSI+DSGVGMTKA+LVNNLG
Subjt:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG

Query:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        TI+R  TKEFMEALQ  ADV+MIGQFGVGFYS     +KV         E  VW+ Q
Subjt:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

TrEMBL top hits

e value

%identity

Alignment

A0A0D2RNF5 HATPase_c domain-containing protein

1.4e-28

54.78

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Query:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG
        MADVKM DVETFAFQAEINQLL                                    + KLDAQ ELFIR+V DKVNKTLSI+DSG+GMTKA+LVNNLG
Subjt:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG

Query:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        TI+R  TKEFMEALQ  ADV+MIGQFGVGFYS     +KV         E  +W+ Q
Subjt:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

A0A5D2IF45 HATPase_c domain-containing protein

4.0e-28

54.14

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Query:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG
        MADVKM D ETFAFQAEINQLL                                    + KLDAQ ELFIR+V DKVNKTLSI+DSG+GMTKA+LVNNLG
Subjt:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG

Query:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        TI+R  TKEFMEALQ  ADV+MIGQFGVGFYS     +KV         E  +W+ Q
Subjt:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

A0A5J5BC28 HATPase_c domain-containing protein

2.3e-28

54.78

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Query:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG
        MADVKM D ETFAFQAEINQLL                                    + KLDAQ ELFIRIV DKVNKTLSI+DSG+GMTKA+LVNNLG
Subjt:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG

Query:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        TI+R  TKEFMEALQ  ADV+MIGQFGVGFYS     +KV         E  +W+ Q
Subjt:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

A0A7J9ELC3 HATPase_c domain-containing protein

4.0e-28

54.14

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Query:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG
        MADVKM D ETFAFQAEINQLL                                    + KLDAQ ELFIR+V DKVNKTLSI+DSG+GMTKA+LVNNLG
Subjt:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG

Query:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        TI+R  TKEFMEALQ  ADV+MIGQFGVGFYS     +KV         E  +W+ Q
Subjt:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

A0A7J9LX26 HATPase_c domain-containing protein

4.0e-28

54.14

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Query:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG
        MADVKM D ETFAFQAEINQLL                                    + KLDAQ ELFIR+V DKVNKTLSI+DSG+GMTKA+LVNNLG
Subjt:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG

Query:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        TI+R  TKEFMEALQ  ADV+MIGQFGVGFYS     +KV         E  +W+ Q
Subjt:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

SwissProt top hits

e value

%identity

Alignment

P27323 Heat shock protein 90-1

4.4e-24

65.98

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Query:  KLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLGTISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        KLD Q ELFIR+V DK NKTLSI+DSG+GMTKA+LVNNLGTI+R  TKEFMEALQ  ADV+MIGQFGVGFYS     +KV         E  VW+ Q
Subjt:  KLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLGTISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

P36181 Heat shock cognate protein 80

3.1e-25

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Query:  MVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLGTISR-
        M DVETFAFQAEINQLL                                    + KLD Q ELFI I+ DK N TL+I+DSG+GMTKA+LVNNLGTI+R 
Subjt:  MVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLGTISR-

Query:  -TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
         TKEFMEAL   ADV+MIGQFGVGFYS     +KV         E  VW+ Q
Subjt:  -TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

P51819 Heat shock protein 83

7.8e-29

52.23

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Query:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG
        MADV+M + ETFAFQAEINQLL                                    + KLDAQ ELFIR+V DK NKTLSI+DSGVGM KA+LVNNLG
Subjt:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG

Query:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        TI+R  TKEFMEALQ  ADV+MIGQFGVGFYS     +KV         E  +W+ Q
Subjt:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

Q08277 Heat shock protein 82

1.9e-22

52.59

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Query:  ADVKM---VDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNN
        ADV M    + ETFAFQAEINQLL                                    +  ++AQ ELFIR+V DK +KTLSI+DSGVGMTK++LVNN
Subjt:  ADVKM---VDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNN

Query:  LGTISR--TKEFMEALQVSA-DVNMIGQFGVGFYS
        LGTI+R  TKEFMEAL   A DV+MIGQFGVGFYS
Subjt:  LGTISR--TKEFMEALQVSA-DVNMIGQFGVGFYS

Q69QQ6 Heat shock protein 81-2

3.2e-22

77.78

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Query:  KLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLGTISR--TKEFMEALQVSADVNMIGQFGVGFYS
        KLDAQ ELFI IV DK + TLSI+DSGVGMTK++LVNNLGTI+R  TKEFMEAL   ADV+MIGQFGVGFYS
Subjt:  KLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLGTISR--TKEFMEALQVSADVNMIGQFGVGFYS

Arabidopsis top hits

e value

%identity

Alignment

AT5G52640.1 heat shock protein 90.1

2.5e-30

52.87

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Query:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG
        MADV+M D ETFAFQAEINQLL                                    + KLD Q ELFIR+V DK NKTLSI+DSG+GMTKA+LVNNLG
Subjt:  MADVKMVDVETFAFQAEINQLL------------------------------------ERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLG

Query:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        TI+R  TKEFMEALQ  ADV+MIGQFGVGFYS     +KV         E  VW+ Q
Subjt:  TISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

AT5G56000.1 HEAT SHOCK PROTEIN 81.4

3.8e-23

61.86

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Query:  KLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLGTISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        KLD Q ELFI I+ DK N TL+I+DSG+GMTKA+LVNNLGTI+R  TKEFMEAL   ADV+MIGQFGVGFYS      KV         E  VW+ Q
Subjt:  KLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLGTISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

AT5G56010.1 heat shock protein 81-3

3.8e-23

61.86

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Query:  KLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLGTISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        KLD Q ELFI I+ DK N TL+I+DSG+GMTKA+LVNNLGTI+R  TKEFMEAL   ADV+MIGQFGVGFYS      KV         E  VW+ Q
Subjt:  KLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLGTISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

AT5G56030.1 heat shock protein 81-2

3.8e-23

61.86

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Query:  KLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLGTISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        KLD Q ELFI I+ DK N TL+I+DSG+GMTKA+LVNNLGTI+R  TKEFMEAL   ADV+MIGQFGVGFYS      KV         E  VW+ Q
Subjt:  KLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLGTISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

AT5G56030.2 heat shock protein 81-2

3.8e-23

61.86

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Query:  KLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLGTISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ
        KLD Q ELFI I+ DK N TL+I+DSG+GMTKA+LVNNLGTI+R  TKEFMEAL   ADV+MIGQFGVGFYS      KV         E  VW+ Q
Subjt:  KLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLGTISR--TKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKV---------EPRVWQIQ

Sequences

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CDS sequence

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CTGCATGAGAGTTCAATGGCAGATGTGAAAATGGTTGATGTTGAGACCTTCGCCTTCCAAGCCGAAATTAACCAGCTTCTCGAGCGCAAACTCGACGCTCAACAAGAGCT
CTTCATCAGGATTGTTTCGGACAAGGTTAACAAAACTCTCTCCATCATGGATAGTGGAGTCGGAATGACTAAAGCAAATCTGGTGAATAACTTGGGAACCATCTCAAGGA
CCAAAGAATTCATGGAGGCATTGCAAGTCAGCGCCGACGTGAACATGATTGGTCAATTTGGTGTAGGGTTCTATTCTAAGGGAAAAGAAAAAAAAAAGGTAGAACCTAGA
GTATGGCAGATTCAGAAAATTTCAACAAGAAAGATGTGCAACAAATTCCTGTATGCAAAATATAAATACAAGAGGTTGTTTGGCGATGTTGACGGGCGATTAGTCTTCAA
TAAGGGAAAGAAAGAAGTTTCGAAGTAA

mRNA sequence

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Protein sequence

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LHESSMADVKMVDVETFAFQAEINQLLERKLDAQQELFIRIVSDKVNKTLSIMDSGVGMTKANLVNNLGTISRTKEFMEALQVSADVNMIGQFGVGFYSKGKEKKKVEPR
VWQIQKISTRKMCNKFLYAKYKYKRLFGDVDGRLVFNKGKKEVSK

Lsi05G011930 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome