CuGenDBv2

Gene ID	Lsi05G012240
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	Zinc finger CCHC domain-containing protein 9
Genome location	chr05:20140154..20144950
RNA-Seq Expression	Lsi05G012240
Synteny	Lsi05G012240
Gene Ontology terms	GO:0003676 - nucleic acid binding (molecular function) GO:0008270 - zinc ion binding (molecular function)
InterPro domains	IPR001878 - Zinc finger, CCHC-type IPR036875 - Zinc finger, CCHC-type superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0033654.1 zinc finger CCHC domain-containing protein 9 [Cucumis melo var. makuwa]

5.0e-88

50.36

Show/hide

Query:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ
        MVSQRQRLARKKY+E HPE FPKAEPTPPKDPDKKKK K     FKRKK ESNS RDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ
Subjt:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ

Query:  WEKNKGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGL
        WEKNK V    L F    + C  +                                        + +LC     G     C  ++EGT  +         
Subjt:  WEKNKGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGL

Query:  WIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYPK
                                                       +L Y C     +L          GTKFASCFICNESGHLSKNCP+NTHGIYPK
Subjt:  WIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYPK

Query:  LPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHLQ
                                         GGCCKTCG+VTHLAKDCP KGTQVFDRAGVS   +SGYVEMPRRPETKL+SGDDLEDDFMIDED LQ
Subjt:  LPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHLQ

Query:  IKNAKIGKKKGPK
        IK+AK+GKKKGPK
Subjt:  IKNAKIGKKKGPK

TYK22955.1 zinc finger CCHC domain-containing protein 9 [Cucumis melo var. makuwa]

2.2e-91

50.84

Show/hide

Query:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ
        MVSQRQRLARKKY+E HPE FPKAEPTPPKDPDKKKK K     FKRKK ESNS RDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ
Subjt:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ

Query:  WEKNKGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGL
        WEKNK V    L F    + C  +                                        + +LC     G     C  ++EGT  +         
Subjt:  WEKNKGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGL

Query:  WIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYPK
                                                       +L Y C     +L          GTKFASCFICNESGHLSKNCP+NTHGIYPK
Subjt:  WIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYPK

Query:  LPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHLQ
                                         GGCCKTCG+VTHLAKDCP KGTQVFDRAGVS   +SGYVEMPRRPETKL+SGDDLEDDFMIDED LQ
Subjt:  LPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHLQ

Query:  IKNAKIGKKKGPKVVRFMD
        IK+AK+GKKKGPKVV+FMD
Subjt:  IKNAKIGKKKGPKVVRFMD

XP_022945772.1 uncharacterized protein LOC111449917 [Cucurbita moschata]

1.2e-84

47.38

Show/hide

Query:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ
        MVS+RQ+LARKKY+EEHPE FPKAEPTPPKDP+KKK+KKKKKS FKRKK ES+S  DP KPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAK CPEKAQ
Subjt:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ

Query:  WEKNK-GVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKG
        WEKNK  +LC                          + +G  +++                        CP             + E T  +        
Subjt:  WEKNK-GVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKG

Query:  LWIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYP
                                                        +L Y C     +L        + GTKFA+CFICNESGHLSKNCP+NTHGIYP
Subjt:  LWIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYP

Query:  KLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHL
        K                                 GGCCKTCG+VTHLAKDCP KGTQVF   G S   +SGYVEM RRPETKL+SGDDLEDDFM++ED+L
Subjt:  KLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHL

Query:  QIKNAKIGKKKGPKVVRFMD
        QIK+AK+GKKKGPKVV+FMD
Subjt:  QIKNAKIGKKKGPKVVRFMD

XP_031738808.1 zinc finger CCHC domain-containing protein 9 [Cucumis sativus]

5.9e-89

Show/hide

Query:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ
        MV+QRQRLARKKYKEEHPE FPKAEPTPPKDPDKKKKK K    FKRKKEESNS RDP KPHKKGFKKHPLRVPGMKPGESCFICKA DHIAKLCPEKAQ
Subjt:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ

Query:  WEKNK-GVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKG
        WEKNK  +LC                          + +G  +++                        CP             ++EGT  +        
Subjt:  WEKNK-GVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKG

Query:  LWIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYP
                                                        +L Y C     +L          GTKFASCFICNESGHLSKNCP+NTHGIYP
Subjt:  LWIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYP

Query:  KLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGV---SASGYVEMPRRPETKLISGDDLEDDFMIDEDHL
        K                                 GGCCKTCG+VTHLAKDCP KGTQVFDRAGV    +SGYVEMPRRPETKLISGDDLEDDFMIDE  L
Subjt:  KLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGV---SASGYVEMPRRPETKLISGDDLEDDFMIDEDHL

Query:  QIKNAKIGKKKGPKVVRFMD
        QIK+AK+GKKKGPKVV+FMD
Subjt:  QIKNAKIGKKKGPKVVRFMD

XP_038886312.1 uncharacterized protein LOC120076526 [Benincasa hispida]

5.7e-84

49.04

Show/hide

Query:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ
        MVSQRQRLARKKY+EEHPE FPKAEPTPPKDPDKKKKK K    FKRKKEES S RD NKP+KKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ
Subjt:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ

Query:  WEKNK-GVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKG
        WEKNK  +LC                          + +G  +++                        CP             ++EGT  +        
Subjt:  WEKNK-GVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKG

Query:  LWIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYP
                                                        +L Y C     +L          GTKFASCFICNESGHLSKNCP+NTHGIYP
Subjt:  LWIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYP

Query:  KLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHL
        K                                 GG CKTCG+VTHLAKDCPNKGTQV DR G S   +SGYVEMPRRPETK ISGDDLEDDFM DED L
Subjt:  KLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHL

Query:  QIKNAKIGKKKGPKVVRF
        QIK+AK+GKKKGPKVVRF
Subjt:  QIKNAKIGKKKGPKVVRF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L9S9 Uncharacterized protein

2.9e-89

Show/hide

Query:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ
        MV+QRQRLARKKYKEEHPE FPKAEPTPPKDPDKKKKK K    FKRKKEESNS RDP KPHKKGFKKHPLRVPGMKPGESCFICKA DHIAKLCPEKAQ
Subjt:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ

Query:  WEKNK-GVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKG
        WEKNK  +LC                          + +G  +++                        CP             ++EGT  +        
Subjt:  WEKNK-GVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKG

Query:  LWIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYP
                                                        +L Y C     +L          GTKFASCFICNESGHLSKNCP+NTHGIYP
Subjt:  LWIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYP

Query:  KLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGV---SASGYVEMPRRPETKLISGDDLEDDFMIDEDHL
        K                                 GGCCKTCG+VTHLAKDCP KGTQVFDRAGV    +SGYVEMPRRPETKLISGDDLEDDFMIDE  L
Subjt:  KLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGV---SASGYVEMPRRPETKLISGDDLEDDFMIDEDHL

Query:  QIKNAKIGKKKGPKVVRFMD
        QIK+AK+GKKKGPKVV+FMD
Subjt:  QIKNAKIGKKKGPKVVRFMD

A0A5A7SR44 Zinc finger CCHC domain-containing protein 9

2.4e-88

50.36

Show/hide

Query:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ
        MVSQRQRLARKKY+E HPE FPKAEPTPPKDPDKKKK K     FKRKK ESNS RDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ
Subjt:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ

Query:  WEKNKGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGL
        WEKNK V    L F    + C  +                                        + +LC     G     C  ++EGT  +         
Subjt:  WEKNKGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGL

Query:  WIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYPK
                                                       +L Y C     +L          GTKFASCFICNESGHLSKNCP+NTHGIYPK
Subjt:  WIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYPK

Query:  LPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHLQ
                                         GGCCKTCG+VTHLAKDCP KGTQVFDRAGVS   +SGYVEMPRRPETKL+SGDDLEDDFMIDED LQ
Subjt:  LPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHLQ

Query:  IKNAKIGKKKGPK
        IK+AK+GKKKGPK
Subjt:  IKNAKIGKKKGPK

A0A5D3DHA5 Zinc finger CCHC domain-containing protein 9

1.1e-91

50.84

Show/hide

Query:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ
        MVSQRQRLARKKY+E HPE FPKAEPTPPKDPDKKKK K     FKRKK ESNS RDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ
Subjt:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ

Query:  WEKNKGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGL
        WEKNK V    L F    + C  +                                        + +LC     G     C  ++EGT  +         
Subjt:  WEKNKGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGL

Query:  WIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYPK
                                                       +L Y C     +L          GTKFASCFICNESGHLSKNCP+NTHGIYPK
Subjt:  WIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYPK

Query:  LPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHLQ
                                         GGCCKTCG+VTHLAKDCP KGTQVFDRAGVS   +SGYVEMPRRPETKL+SGDDLEDDFMIDED LQ
Subjt:  LPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHLQ

Query:  IKNAKIGKKKGPKVVRFMD
        IK+AK+GKKKGPKVV+FMD
Subjt:  IKNAKIGKKKGPKVVRFMD

A0A6J1G1V2 uncharacterized protein LOC111449917

5.6e-85

47.38

Show/hide

Query:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ
        MVS+RQ+LARKKY+EEHPE FPKAEPTPPKDP+KKK+KKKKKS FKRKK ES+S  DP KPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAK CPEKAQ
Subjt:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ

Query:  WEKNK-GVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKG
        WEKNK  +LC                          + +G  +++                        CP             + E T  +        
Subjt:  WEKNK-GVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKG

Query:  LWIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYP
                                                        +L Y C     +L        + GTKFA+CFICNESGHLSKNCP+NTHGIYP
Subjt:  LWIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYP

Query:  KLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHL
        K                                 GGCCKTCG+VTHLAKDCP KGTQVF   G S   +SGYVEM RRPETKL+SGDDLEDDFM++ED+L
Subjt:  KLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHL

Query:  QIKNAKIGKKKGPKVVRFMD
        QIK+AK+GKKKGPKVV+FMD
Subjt:  QIKNAKIGKKKGPKVVRFMD

A0A6J1HYC2 uncharacterized protein LOC111467373

2.6e-82

46.19

Show/hide

Query:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ
        MVS+RQ+LARKKY+EEHPE FPKAEPTPPKDP+    KKKKKS FKRKK ES+S  DPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAK CPEKAQ
Subjt:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQ

Query:  WEKNK-GVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKG
        WEKNK  +LC                          + +G  +++                        CP             + E T  +        
Subjt:  WEKNK-GVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKG

Query:  LWIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYP
                                                        +L Y C     +L        + GTK+A+CFICNESGHLSKNCP+NTHGIYP
Subjt:  LWIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYP

Query:  KLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHL
        K                                 GGCCKTCG+VTHLAKDCP KGTQV+   GVS   +SGYVEM RRPET+L+SGDDLEDDFM++ED+L
Subjt:  KLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVS---ASGYVEMPRRPETKLISGDDLEDDFMIDEDHL

Query:  QIKNAKIGKKKGPKVVRFMD
        QIK+AK+G KKGPKVV+FMD
Subjt:  QIKNAKIGKKKGPKVVRFMD

SwissProt top hits

e value

%identity

Alignment

Q8N567 Zinc finger CCHC domain-containing protein 9

7.0e-08

31.03

Show/hide

Query:  FASCFICNESGHLSKNCPRNTHGIYPKLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCP-NKGTQVFDRAGVSASGY----
        FA CF+C E GHLS++CP N  G+Y                                   GG CK CG V HL KDCP ++ ++     G  A G     
Subjt:  FASCFICNESGHLSKNCPRNTHGIYPKLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCP-NKGTQVFDRAGVSASGY----

Query:  -----VEMPRRPETKL
             V  P++P+TK+
Subjt:  -----VEMPRRPETKL

Q8R1J3 Zinc finger CCHC domain-containing protein 9

2.9e-06

35.06

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Query:  FASCFICNESGHLSKNCPRNTHGIYPKLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDC
        FA CF+C E GHLS++CP NT G+Y                                   GG CK CG V H  KDC
Subjt:  FASCFICNESGHLSKNCPRNTHGIYPKLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDC

Q9HFF2 Uncharacterized protein C683.02c

3.1e-08

39.74

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Query:  KFASCFICNESGHLSKNCPRNTHGIYPKLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDC
        KFA CFIC+E+GHLS  C +N  G+YPK                                 GGCCK C  V HLAKDC
Subjt:  KFASCFICNESGHLSKNCPRNTHGIYPKLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDC

Arabidopsis top hits

e value

%identity

Alignment

AT4G36020.1 cold shock domain protein 1

3.7e-04

28.18

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Query:  RGTKFASCFICNESGHLSKNC---------PRNTHGIYPKLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGG---CCKTCGQVTHLAKDCPNKGTQV
        RG   + C+ C E GH+SK+C          R + G      C D GH        F     +  + + +    G    C TCG V H+A+DC  K    
Subjt:  RGTKFASCFICNESGHLSKNC---------PRNTHGIYPKLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGG---CCKTCGQVTHLAKDCPNKGTQV

Query:  FDRAGVSASG
         D+ G    G
Subjt:  FDRAGVSASG

AT5G52380.1 VASCULAR-RELATED NAC-DOMAIN 6

2.4e-43

33.8

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Query:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFK-KHPLRVPGMKPGESCFICKAKDHIAKLCPEKA
        MV+QR+RLA+K+YKE +PE FPKAEPTPPKDP+   KKKKKKS FK+KK  S++ R    P + G   +HPLRVPGMKPGE CFIC +K HIAKLCPEK+
Subjt:  MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFK-KHPLRVPGMKPGESCFICKAKDHIAKLCPEKA

Query:  QWEKNKGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKG
        +WE+NK  +C       H      E    +S                                     LC         Y C                  
Subjt:  QWEKNKGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKG

Query:  LWIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYP
                     D    + H P+ M                                             GTKFASCFIC   GH+SKNCP N HGIYP
Subjt:  LWIRSYAIIVVKQDIHWLIVHNPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYP

Query:  KLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVSASGYVEMPRRPETKLISGDDLEDDFM---------
                                         +GGCCK CG V HL KDCP+K  Q         S +   PR   TK  SGDDLEDDF          
Subjt:  KLPCDDNGHTPDSWLRCFPIVSLTLVSYNFKNFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVSASGYVEMPRRPETKLISGDDLEDDFM---------

Query:  -IDEDHLQIKNAKIGKKKGPKVVRFM
           +D  Q       KK+GPK+V F+
Subjt:  -IDEDHLQIKNAKIGKKKGPKVVRFM

Sequences

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CDS sequence

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ATGGTGAGCCAAAGGCAAAGACTTGCTCGGAAGAAGTACAAAGAAGAACACCCAGAACGGTTCCCGAAAGCAGAGCCAACGCCACCAAAAGACCCCGACAAGAAGAAGAA
GAAGAAGAAGAAGAAGAGCACATTCAAGCGCAAAAAGGAAGAATCGAATTCAACCAGAGACCCAAATAAACCCCACAAAAAGGGTTTTAAGAAACACCCTCTTAGAGTGC
CTGGGATGAAGCCTGGAGAAAGCTGCTTCATCTGCAAAGCTAAAGACCACATTGCTAAGCTTTGCCCTGAAAAGGCTCAGTGGGAGAAGAACAAGGGAGTCTTATGTCCA
TCTCTGTTATTTGGCACTCACAGATATGCTTGCTTTGCCGAAGACGAGGGCACAGCCTCAAGAATTGCCCGGACAAAAATGAAGGGACTGTGGATAAGAAGTTATGCTAT
AATTGTGGTGAAACAGGACATTCACTGGCTAATTGTCCACAACCCCTTCAAGATGGGAGTCTTATGTCCATCTCTGTTATTTGGCACTCACAGATATGCTTGCTTTGCCG
AAGACGAGGGCACAGCCTCAAGAATTGCCCGGACAAAAATGAAGGGACTGTGGATAAGAAGTTATGCTATAATTGTGGTGAAACAGGACATTCACTGGCTAATTGTCCAC
AACCCCTTCAAGATGCACTTGTATTTCAATTCTTCCAAACTAAGTGCCTTTCATATATTCCTATGGAATGAAGTGCTTTTGCGATTGCAATACAGATGCTCTGGAGCTTT
TAAGGCTTTATTTATTTATTTTCTGAATTATATGTATCGGGGAACTAAATTCGCGAGTTGTTTTATTTGTAATGAAAGCGGACACTTAAGCAAGAACTGTCCAAGGAATA
CTCACGGGATCTACCCTAAGCTTCCATGTGATGACAATGGTCACACACCAGACTCCTGGCTTCGCTGTTTCCCCATAGTATCCTTGACCCTTGTATCATACAACTTTAAG
AATTTCCTTGGTGGTTGTTGTAAAACTTGTGGGCAAGTCACACATTTAGCTAAGGATTGTCCAAACAAAGGCACCCAAGTGTTTGATAGGGCCGGTGTATCTGCATCTGG
CTATGTGGAAATGCCGAGACGACCAGAGACGAAGCTCATCAGCGGTGATGATCTCGAGGATGACTTCATGATCGATGAAGATCATTTACAGATCAAAAATGCAAAAATAG
GAAAGAAAAAGGGTCCCAAAGTTGTGAGGTTCATGGATTGA

mRNA sequence

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TTCGCATAAACCTCGCCGTCACTCCGTTTGTTGAGAAAACCTCATCGGGATTTCGCCGGAGCCGTCATCTTCCGATTCTGAAGGACCCTTTTTCAGGTGAAGATGGTGAG
CCAAAGGCAAAGACTTGCTCGGAAGAAGTACAAAGAAGAACACCCAGAACGGTTCCCGAAAGCAGAGCCAACGCCACCAAAAGACCCCGACAAGAAGAAGAAGAAGAAGA
AGAAGAAGAGCACATTCAAGCGCAAAAAGGAAGAATCGAATTCAACCAGAGACCCAAATAAACCCCACAAAAAGGGTTTTAAGAAACACCCTCTTAGAGTGCCTGGGATG
AAGCCTGGAGAAAGCTGCTTCATCTGCAAAGCTAAAGACCACATTGCTAAGCTTTGCCCTGAAAAGGCTCAGTGGGAGAAGAACAAGGGAGTCTTATGTCCATCTCTGTT
ATTTGGCACTCACAGATATGCTTGCTTTGCCGAAGACGAGGGCACAGCCTCAAGAATTGCCCGGACAAAAATGAAGGGACTGTGGATAAGAAGTTATGCTATAATTGTGG
TGAAACAGGACATTCACTGGCTAATTGTCCACAACCCCTTCAAGATGGGAGTCTTATGTCCATCTCTGTTATTTGGCACTCACAGATATGCTTGCTTTGCCGAAGACGAG
GGCACAGCCTCAAGAATTGCCCGGACAAAAATGAAGGGACTGTGGATAAGAAGTTATGCTATAATTGTGGTGAAACAGGACATTCACTGGCTAATTGTCCACAACCCCTT
CAAGATGCACTTGTATTTCAATTCTTCCAAACTAAGTGCCTTTCATATATTCCTATGGAATGAAGTGCTTTTGCGATTGCAATACAGATGCTCTGGAGCTTTTAAGGCTT
TATTTATTTATTTTCTGAATTATATGTATCGGGGAACTAAATTCGCGAGTTGTTTTATTTGTAATGAAAGCGGACACTTAAGCAAGAACTGTCCAAGGAATACTCACGGG
ATCTACCCTAAGCTTCCATGTGATGACAATGGTCACACACCAGACTCCTGGCTTCGCTGTTTCCCCATAGTATCCTTGACCCTTGTATCATACAACTTTAAGAATTTCCT
TGGTGGTTGTTGTAAAACTTGTGGGCAAGTCACACATTTAGCTAAGGATTGTCCAAACAAAGGCACCCAAGTGTTTGATAGGGCCGGTGTATCTGCATCTGGCTATGTGG
AAATGCCGAGACGACCAGAGACGAAGCTCATCAGCGGTGATGATCTCGAGGATGACTTCATGATCGATGAAGATCATTTACAGATCAAAAATGCAAAAATAGGAAAGAAA
AAGGGTCCCAAAGTTGTGAGGTTCATGGATTGATTGATACCTGTATGAGATAAATTGTTCTCGTGTTTGTTGTAAAGACCCTTTCTTTTTACACATAAGAGAAAACTGGG
TAGTTTTGGAACGTCACCCATTATTTACAACTGTTTCTTTCCCCTCCCTAATTTTTGTCTCTTAATTATCATTTTCATCAAATAATGTCTCAAAAGGAGGCTCATTATAT
GATGAACTTTTCTTTTTTGAAGAAGAAGAAATGAAAAATACAAATGGTAACTATTTCCCCCCCTT

Protein sequence

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MVSQRQRLARKKYKEEHPERFPKAEPTPPKDPDKKKKKKKKKSTFKRKKEESNSTRDPNKPHKKGFKKHPLRVPGMKPGESCFICKAKDHIAKLCPEKAQWEKNKGVLCP
SLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVHNPFKMGVLCPSLLFGTHRYACFAEDEGTASRIARTKMKGLWIRSYAIIVVKQDIHWLIVH
NPFKMHLYFNSSKLSAFHIFLWNEVLLRLQYRCSGAFKALFIYFLNYMYRGTKFASCFICNESGHLSKNCPRNTHGIYPKLPCDDNGHTPDSWLRCFPIVSLTLVSYNFK
NFLGGCCKTCGQVTHLAKDCPNKGTQVFDRAGVSASGYVEMPRRPETKLISGDDLEDDFMIDEDHLQIKNAKIGKKKGPKVVRFMD

Lsi05G012240 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome