CuGenDBv2

Gene ID	Lsi05G012370
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	flap endonuclease GEN-like 2
Genome location	chr05:20221512..20223433
RNA-Seq Expression	Lsi05G012370
Synteny	Lsi05G012370
Gene Ontology terms	GO:0006259 - DNA metabolic process (biological process) GO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process) GO:0003677 - DNA binding (molecular function) GO:0017108 - 5'-flap endonuclease activity (molecular function) GO:0046872 - metal ion binding (molecular function)
InterPro domains	IPR000953 - Chromo/chromo shadow domain IPR006084 - XPG/Rad2 endonuclease IPR016197 - Chromo-like domain superfamily

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAA0033634.1 flap endonuclease GEN-like 2 isoform X1 [Cucumis melo var. makuwa]

1.3e-116

83.97

Show/hide

Query:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA
        VLVQHPF+R+KLQQIC EFF WPP+KTDE ILP IAERDLRRFANIR +TSELGFNIPLQE+PV+CPVSGIVKHRKVQGN+CYEVSWK IDGL  SVV A
Subjt:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA

Query:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST
        DLLQSACPEMI+EFEE+RAEG+KQNK  TKTKKS AA+AEIDKRLQTLLLEIESESRAVHN+SH+PI S+TSGTGV ELNQE F ++EPIIVDHARSCST
Subjt:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST

Query:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLK
        +RIEVI+LLSPSPA+ TR+VSKFQQK SQKIDVIDLSDTE DQSPEHERKARELR+F+A+LK
Subjt:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLK

TYK22933.1 flap endonuclease GEN-like 2 isoform X1 [Cucumis melo var. makuwa]

1.3e-116

83.97

Show/hide

Query:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA
        VLVQHPF+R+KLQQIC EFF WPP+KTDE ILP IAERDLRRFANIR +TSELGFNIPLQE+PV+CPVSGIVKHRKVQGN+CYEVSWK IDGL  SVV A
Subjt:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA

Query:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST
        DLLQSACPEMI+EFEE+RAEG+KQNK  TKTKKS AA+AEIDKRLQTLLLEIESESRAVHN+SH+PI S+TSGTGV ELNQE F ++EPIIVDHARSCST
Subjt:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST

Query:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLK
        +RIEVI+LLSPSPA+ TR+VSKFQQK SQKIDVIDLSDTE DQSPEHERKARELR+F+A+LK
Subjt:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLK

XP_004140848.1 flap endonuclease GEN-like 2 [Cucumis sativus]

7.1e-115

82.95

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Query:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA
        VL QHPF+ VKLQQIC EFF W PEKTDE ILPKIAERDLRRFANIR +TSELGFNIPLQE+PV+CP+SGIVKHRKVQGN+CYEVSWK I GL+ SVV A
Subjt:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA

Query:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST
        DLLQ ACPEMIIEFEE+RA+G+KQNK  TKTKKS A +AEIDKRL+TLLLEIESESR VHN+SHVPI S+TSGTGV ELNQE F ++EPIIVDHARSCST
Subjt:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST

Query:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLKGK
        +RIEVI+LLSPSPA+QTR VSKFQQK SQKIDVIDLSDTE DQSPEHERKARELR+FLA+LKGK
Subjt:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLKGK

XP_008439213.1 PREDICTED: flap endonuclease GEN-like 2 isoform X1 [Cucumis melo]

2.0e-117

84.09

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Query:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA
        VLVQHPF+RVKLQQIC EFF WPP+KTDE ILP IAERDLRRFANIR +TSELGFNIPLQE+PV+CPVSGIVKHRKVQGN+CYEVSWK IDGL  SVV A
Subjt:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA

Query:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST
        DLLQSACPEMI+EFEE+RAEG+KQNK  TKTKKS AA+AEIDKRLQTLLLEIESESRAVHN+SH+PI S+TSGTGV ELNQE F ++EPIIVDHARSCST
Subjt:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST

Query:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLKGK
        +RIEVI+LLSPSPA+ T +VSKFQQK SQKIDVIDLSDTE DQSPEHERKARELR+F+A+LKGK
Subjt:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLKGK

XP_038890874.1 LOW QUALITY PROTEIN: single-strand DNA endonuclease 1 [Benincasa hispida]

2.6e-125

88.39

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Query:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA
        VLVQHPF+R+KLQ+IC + FAWPPEKTDEYILPKIAERDLRRFANIR KTSELGFNIPLQEVPVNCPVSGIVKHR+VQGNDCYEVSWK +DGLDSSVVPA
Subjt:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA

Query:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQ--TLLLEIESESRAVHNLSHVPIVSE--TSGTGVELNQERFHDVEPIIVDHARS
        DLLQ+ACPEMIIEFEEQRAEGRKQNKR TKTKK+EA VAEID+RL   TLLLEIESESRAVHNLSHVPIVS+  TS TGVELN+E F D+EPIIVDHA S
Subjt:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQ--TLLLEIESESRAVHNLSHVPIVSE--TSGTGVELNQERFHDVEPIIVDHARS

Query:  CSTERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLKGK
         STERIEVINLLSPSPAMQTRKVSKF +KNSQKIDVIDLSDTETDQSPEHERKARELR+FLATLKGK
Subjt:  CSTERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLKGK

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L8N4 Uncharacterized protein

3.5e-115

82.95

Show/hide

Query:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA
        VL QHPF+ VKLQQIC EFF W PEKTDE ILPKIAERDLRRFANIR +TSELGFNIPLQE+PV+CP+SGIVKHRKVQGN+CYEVSWK I GL+ SVV A
Subjt:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA

Query:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST
        DLLQ ACPEMIIEFEE+RA+G+KQNK  TKTKKS A +AEIDKRL+TLLLEIESESR VHN+SHVPI S+TSGTGV ELNQE F ++EPIIVDHARSCST
Subjt:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST

Query:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLKGK
        +RIEVI+LLSPSPA+QTR VSKFQQK SQKIDVIDLSDTE DQSPEHERKARELR+FLA+LKGK
Subjt:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLKGK

A0A1S3AYA2 flap endonuclease GEN-like 2 isoform X1

9.7e-118

84.09

Show/hide

Query:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA
        VLVQHPF+RVKLQQIC EFF WPP+KTDE ILP IAERDLRRFANIR +TSELGFNIPLQE+PV+CPVSGIVKHRKVQGN+CYEVSWK IDGL  SVV A
Subjt:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA

Query:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST
        DLLQSACPEMI+EFEE+RAEG+KQNK  TKTKKS AA+AEIDKRLQTLLLEIESESRAVHN+SH+PI S+TSGTGV ELNQE F ++EPIIVDHARSCST
Subjt:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST

Query:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLKGK
        +RIEVI+LLSPSPA+ T +VSKFQQK SQKIDVIDLSDTE DQSPEHERKARELR+F+A+LKGK
Subjt:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLKGK

A0A5A7SR22 Flap endonuclease GEN-like 2 isoform X1

6.3e-117

83.97

Show/hide

Query:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA
        VLVQHPF+R+KLQQIC EFF WPP+KTDE ILP IAERDLRRFANIR +TSELGFNIPLQE+PV+CPVSGIVKHRKVQGN+CYEVSWK IDGL  SVV A
Subjt:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA

Query:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST
        DLLQSACPEMI+EFEE+RAEG+KQNK  TKTKKS AA+AEIDKRLQTLLLEIESESRAVHN+SH+PI S+TSGTGV ELNQE F ++EPIIVDHARSCST
Subjt:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST

Query:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLK
        +RIEVI+LLSPSPA+ TR+VSKFQQK SQKIDVIDLSDTE DQSPEHERKARELR+F+A+LK
Subjt:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLK

A0A5D3DH91 Flap endonuclease GEN-like 2 isoform X1

6.3e-117

83.97

Show/hide

Query:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA
        VLVQHPF+R+KLQQIC EFF WPP+KTDE ILP IAERDLRRFANIR +TSELGFNIPLQE+PV+CPVSGIVKHRKVQGN+CYEVSWK IDGL  SVV A
Subjt:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA

Query:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST
        DLLQSACPEMI+EFEE+RAEG+KQNK  TKTKKS AA+AEIDKRLQTLLLEIESESRAVHN+SH+PI S+TSGTGV ELNQE F ++EPIIVDHARSCST
Subjt:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGV-ELNQERFHDVEPIIVDHARSCST

Query:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLK
        +RIEVI+LLSPSPA+ TR+VSKFQQK SQKIDVIDLSDTE DQSPEHERKARELR+F+A+LK
Subjt:  ERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLK

A0A6J1CIZ7 flap endonuclease GEN-like 2

2.1e-112

79.85

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Query:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA
        VLVQHPF+R+KLQQIC E F WPPEKTDEYILPKIAERDLRRFAN+R  TS LGFNIPLQE+P NCPVSGIVKHRKVQG+DC+EVSWK ++GLDSS+VPA
Subjt:  VLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPA

Query:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVH--NLSHVPIVSE--TSGTGV-ELNQERFHDVEPIIVDHAR
        DLLQSACPEMI+EFEEQ+A+G KQN+R TKTKKSEAAVAEIDKRLQTLLL+IESESRAVH  +LSH PIVSE  TS TGV E+NQE F DVEP I+D  R
Subjt:  DLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVH--NLSHVPIVSE--TSGTGV-ELNQERFHDVEPIIVDHAR

Query:  SCSTERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLKGK
          STERIEVI+LLSPSPA+QT KVSKFQQ+NS+KIDVIDLSD E+D+SPEHERKARELR FL +L+ K
Subjt:  SCSTERIEVINLLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLKGK

SwissProt top hits

e value

%identity

Alignment

Q8W5R1 Single-strand DNA endonuclease 1

3.5e-48

47.75

Show/hide

Query:  QHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPADLL
        QHPF R +LQ+IC E+F W PEKTD+YILPKIAER+LRRF+++R  +S LG    L E+PV CPV  IVK RKV GN+CYEVSW+ I+GL  SVVP DL+
Subjt:  QHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVPADLL

Query:  QSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGVELNQERFHDVEPIIVDHARSCSTERIE
        +SACPE I EF E++ E +KQ +R    K  +AAV ++D++LQ LLL IE++S  +  L     V +T      +  E                     +
Subjt:  QSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGVELNQERFHDVEPIIVDHARSCSTERIE

Query:  VINLLSPSPAMQTRKVSKFQQK
        V++L SPSP +  RK+SK Q+K
Subjt:  VINLLSPSPAMQTRKVSKFQQK

Q9M2Z3 Single-strand DNA endonuclease 1

5.4e-49

41.2

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Query:  LVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQ--EVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVP
        L +  F+R KLQ+IC +FF WPPEKTDEYILPK+AER+LRRFAN++ +++E+  N+PL   ++P  CPVS I+K RKVQG +C+EVSW  ++GL+SS+VP
Subjt:  LVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQ--EVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVP

Query:  ADLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGVELNQERFHDVEPIIVDHARSCST
        ADL++ ACPE IIEF+E+ A  +K+ K   K K+ E +       L  L LE++       +L     + E      + N ++   +  I      +C+ 
Subjt:  ADLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGVELNQERFHDVEPIIVDHARSCST

Query:  ------------------ERIEVINLLSPSPAMQTRKVSK-FQQKNS---QKIDVIDLSDTETDQSPEHERKARELRTFLATLK
                             EVI+L+SP P  ++R VS+ +Q++ S   Q   VI+LSD+ETD   EH +KARELR FL  ++
Subjt:  ------------------ERIEVINLLSPSPAMQTRKVSK-FQQKNS---QKIDVIDLSDTETDQSPEHERKARELRTFLATLK

Arabidopsis top hits

e value

%identity

Alignment

AT3G48900.1 single-stranded DNA endonuclease family protein

3.9e-50

41.2

Show/hide

Query:  LVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQ--EVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVP
        L +  F+R KLQ+IC +FF WPPEKTDEYILPK+AER+LRRFAN++ +++E+  N+PL   ++P  CPVS I+K RKVQG +C+EVSW  ++GL+SS+VP
Subjt:  LVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQ--EVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVP

Query:  ADLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGVELNQERFHDVEPIIVDHARSCST
        ADL++ ACPE IIEF+E+ A  +K+ K   K K+ E +       L  L LE++       +L     + E      + N ++   +  I      +C+ 
Subjt:  ADLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGVELNQERFHDVEPIIVDHARSCST

Query:  ------------------ERIEVINLLSPSPAMQTRKVSK-FQQKNS---QKIDVIDLSDTETDQSPEHERKARELRTFLATLK
                             EVI+L+SP P  ++R VS+ +Q++ S   Q   VI+LSD+ETD   EH +KARELR FL  ++
Subjt:  ------------------ERIEVINLLSPSPAMQTRKVSK-FQQKNS---QKIDVIDLSDTETDQSPEHERKARELRTFLATLK

AT3G48900.2 single-stranded DNA endonuclease family protein

3.9e-50

41.2

Show/hide

Query:  LVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQ--EVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVP
        L +  F+R KLQ+IC +FF WPPEKTDEYILPK+AER+LRRFAN++ +++E+  N+PL   ++P  CPVS I+K RKVQG +C+EVSW  ++GL+SS+VP
Subjt:  LVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQ--EVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSSVVP

Query:  ADLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGVELNQERFHDVEPIIVDHARSCST
        ADL++ ACPE IIEF+E+ A  +K+ K   K K+ E +       L  L LE++       +L     + E      + N ++   +  I      +C+ 
Subjt:  ADLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGVELNQERFHDVEPIIVDHARSCST

Query:  ------------------ERIEVINLLSPSPAMQTRKVSK-FQQKNS---QKIDVIDLSDTETDQSPEHERKARELRTFLATLK
                             EVI+L+SP P  ++R VS+ +Q++ S   Q   VI+LSD+ETD   EH +KARELR FL  ++
Subjt:  ------------------ERIEVINLLSPSPAMQTRKVSK-FQQKNS---QKIDVIDLSDTETDQSPEHERKARELRTFLATLK

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGAATTTTGTTTTAGTTTTGTTCATCTGTGTTGCAGTAATGGTTCTTGTTCAGCACCCTTTTCGACGTGTCAAACTTCAGCAGATATGCGTCGAATTTTTCGCATGGCC
TCCTGAGAAAACAGATGAGTACATTCTCCCAAAGATAGCAGAAAGAGATCTACGGCGATTTGCGAACATTCGGTGTAAAACATCAGAACTTGGTTTCAATATTCCACTTC
AAGAGGTACCAGTTAATTGTCCTGTTTCCGGAATTGTCAAGCATCGAAAAGTCCAGGGCAACGACTGCTATGAGGTTTCTTGGAAAAAAATTGATGGACTTGATTCATCT
GTTGTGCCAGCAGATCTCTTGCAGAGTGCCTGTCCCGAGATGATTATAGAATTTGAGGAGCAAAGGGCTGAAGGAAGAAAACAAAATAAGCGCGGAACTAAAACAAAGAA
GTCGGAGGCTGCTGTGGCTGAAATTGATAAAAGGCTTCAAACTCTGTTGCTTGAAATCGAATCTGAAAGCAGGGCAGTTCATAATCTCTCCCATGTTCCAATAGTTTCAG
AGACTTCTGGTACTGGTGTTGAACTGAACCAAGAGCGTTTTCATGACGTTGAACCAATCATTGTTGATCACGCTCGTAGCTGTAGCACAGAGAGGATTGAGGTCATTAAT
CTCTTAAGCCCTTCACCTGCAATGCAAACCCGTAAGGTTTCAAAATTTCAACAGAAAAATAGTCAAAAGATTGATGTAATTGATTTGAGTGATACGGAAACTGATCAGTC
ACCTGAACATGAGAGAAAGGCAAGAGAGTTGAGAACTTTCTTAGCTACTTTAAAGGGTAAATGA

mRNA sequence

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Protein sequence

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MNFVLVLFICVAVMVLVQHPFRRVKLQQICVEFFAWPPEKTDEYILPKIAERDLRRFANIRCKTSELGFNIPLQEVPVNCPVSGIVKHRKVQGNDCYEVSWKKIDGLDSS
VVPADLLQSACPEMIIEFEEQRAEGRKQNKRGTKTKKSEAAVAEIDKRLQTLLLEIESESRAVHNLSHVPIVSETSGTGVELNQERFHDVEPIIVDHARSCSTERIEVIN
LLSPSPAMQTRKVSKFQQKNSQKIDVIDLSDTETDQSPEHERKARELRTFLATLKGK

Lsi05G012370 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome