CuGenDBv2

Gene ID	Lsi05G012400
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	ADP-ribosylation factor-related protein 1
Genome location	chr05:20232557..20233738
RNA-Seq Expression	Lsi05G012400
Synteny	Lsi05G012400
Gene Ontology terms	GO:0006886 - intracellular protein transport (biological process) GO:0033365 - protein localization to organelle (biological process) GO:0043001 - Golgi to plasma membrane protein transport (biological process) GO:0005794 - Golgi apparatus (cellular component) GO:0003924 - GTPase activity (molecular function) GO:0005525 - GTP binding (molecular function)
InterPro domains	IPR006689 - Small GTPase superfamily, ARF/SAR type IPR027417 - P-loop containing nucleoside triphosphate hydrolase

Homology

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GenBank top hits

e value

%identity

Alignment

KAE8650454.1 hypothetical protein Csa_010035 [Cucumis sativus]

8.8e-28

94.37

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Query:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA
        QDLPEA S EELSRYLDLKKLDERVYMFEAVSGYDGMGIK+SVEWLVDIMERSKRTEILRARAGGAGL SA
Subjt:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA

XP_008439194.1 PREDICTED: ADP-ribosylation factor-related protein 1 isoform X1 [Cucumis melo]

1.5e-27

94.37

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Query:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA
        QDLPEA S EELSRYLDLKKLDERVYMFEAVSGYDGMGIK SVEWLVDIMERSKRTEILRARAGGAGL SA
Subjt:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA

XP_022923136.1 ADP-ribosylation factor-related protein 1-like isoform X1 [Cucurbita moschata]

3.3e-27

94.37

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Query:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA
        QDLPEA S EELSRYLDLKKLDERV MFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGL SA
Subjt:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA

XP_022984611.1 ADP-ribosylation factor-related protein 1-like isoform X1 [Cucurbita maxima]

1.3e-26

92.96

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Query:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA
        QDLPEA S EELSRYLDLKKLDERV MFEAVSGYDGMGIKESVEWLV+IMERSKRTEILRARAGGAGL SA
Subjt:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA

XP_023552464.1 ADP-ribosylation factor-related protein 1-like isoform X1 [Cucurbita pepo subsp. pepo]

1.3e-26

92.96

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Query:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA
        QDLPEA S EELSRYLDLKKLDERV MFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGA L SA
Subjt:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA

TrEMBL top hits

e value

%identity

Alignment

A0A1S3AY63 ADP-ribosylation factor-related protein 1 isoform X1

7.3e-28

94.37

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Query:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA
        QDLPEA S EELSRYLDLKKLDERVYMFEAVSGYDGMGIK SVEWLVDIMERSKRTEILRARAGGAGL SA
Subjt:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA

A0A5D3DGZ9 ADP-ribosylation factor-related protein 1 isoform X1

7.3e-28

94.37

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Query:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA
        QDLPEA S EELSRYLDLKKLDERVYMFEAVSGYDGMGIK SVEWLVDIMERSKRTEILRARAGGAGL SA
Subjt:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA

A0A6J1CGD0 ADP-ribosylation factor-related protein 1 isoform X1

1.0e-26

91.55

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Query:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA
        QDLPEA S EELSRYLDLKKLDERVYMFEAVSGYDGMGIKE VEWLVDIMERSKRTE+LRARAG AG GSA
Subjt:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA

A0A6J1E600 ADP-ribosylation factor-related protein 1-like isoform X1

1.6e-27

94.37

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Query:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA
        QDLPEA S EELSRYLDLKKLDERV MFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGL SA
Subjt:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA

A0A6J1J5R9 ADP-ribosylation factor-related protein 1-like isoform X1

6.1e-27

92.96

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Query:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA
        QDLPEA S EELSRYLDLKKLDERV MFEAVSGYDGMGIKESVEWLV+IMERSKRTEILRARAGGAGL SA
Subjt:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA

SwissProt top hits

e value

%identity

Alignment

P38116 ADP-ribosylation factor-like protein 1

7.0e-04

37.04

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Query:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSK
        QD P A S  E+S+ L+L +L +R +   A S   G GI E ++WL+D+++  +
Subjt:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSK

Q54UF1 ADP-ribosylation factor-like protein 2

2.4e-04

39.62

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Query:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLV-DIMER
        QDL  A + EE+S+YLDL++L+   +   + S   G+G++E ++W+V DI+ R
Subjt:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLV-DIMER

Arabidopsis top hits

e value

%identity

Alignment

AT5G52210.1 GTP-binding protein 1

1.3e-24

82.81

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Query:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAG
        QDL  A S EEL RYLDLKKLDERVYMFEAVSGYDG GIKES+EWLV +ME+SKRTE LRARAG
Subjt:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAG

AT5G52210.2 GTP-binding protein 1

1.3e-24

82.81

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Query:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAG
        QDL  A S EEL RYLDLKKLDERVYMFEAVSGYDG GIKES+EWLV +ME+SKRTE LRARAG
Subjt:  QDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAG

Sequences

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CDS sequence

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mRNA sequence

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ATGGATGTGCAGGATCTTCCGGAAGCAGCATCAGGGGAAGAACTTTCTCGTTATCTCGATCTTAAAAAATTGGATGAAAGAGTCTACATGTTTGAAGCTGTTTCTGGCTA
TGATGGGATGGGCATAAAGGAAAGTGTTGAATGGTTGGTGGATATAATGGAAAGAAGTAAAAGAACCGAAATATTGAGAGCTCGAGCAGGTGGGGCTGGTCTCGGTTCTG
CTTAGATCAAATATGAAACAACTATAGTTGGTCTATATTTCTTCCATAAACTTGTGAACCAGGTTCCATATTAGATCCTACATGCCTTAAAAAGCTAGATTTCCCCCAGT
TACATCTGATTGCATCACTCTACATTCTTAAACTGCGTAGAACTAAGAAAATCAAGCTGAAACACTTTATATTAGCCACTTGACTTTTGGTACTTATAGTGAATGTTCCT
CTCGTTTACAGGTGTTAGAGGCCCCTAATTCAATTCGAATTACAATCTCCTGTCTGAGAGCGTCCACTCGATCTGGCTTCCTTTTATCTAGCTTTACTACACAATGTAAA
GATAATCTTGATTCAAGGGCTAATTGGTAGCTTTAGAATTCCCACCCACAAAAGTACAGAATTACGTGTTTGAACCTGGGAATGTTTTCATGGGCATTCTTGGCTGACCA
TGTTTCATACAAGTGATCTGAATTTTGTCATCCTTAAGTCTTATAAAGTTGTTACATTTCAAAGTGTTACAGTATTTATTATCATGATTGGATTGAAAAACAAACATCAG
CGGACTCGAGCAGACTCAAGCTCTGCTCGAAGTATCCATAAATAAATACGAGATACATGCTTAACGAGATTGAACTGCAAATTAACCATACTAAGGTCAGCAACTGAGGG
TAACTTAGAACCAAATCAAAATCAAGTGATGTTTGTAGGCATCATACAGCAGCAGATTATGTTGCCCAGGAGGTAAGGTGCAAAAATTGGGCAAAAG

Protein sequence

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MDVQDLPEAASGEELSRYLDLKKLDERVYMFEAVSGYDGMGIKESVEWLVDIMERSKRTEILRARAGGAGLGSA

Lsi05G012400 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome