CuGenDBv2

Gene ID	Lsi05G012580
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic
Genome location	chr05:20347682..20351557
RNA-Seq Expression	Lsi05G012580
Synteny	Lsi05G012580
Gene Ontology terms	GO:0010190 - cytochrome b6f complex assembly (biological process)
InterPro domains	IPR021325 - Cofactor assembly of complex C subunit B, CCB2/CCB4 IPR044970 - COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

XP_004140790.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X2 [Cucumis sativus]

4.8e-138

90.31

Show/hide

Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        MISSI SPSPLN+LTSA  FRAKSKTK  PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFLKGA+PSGEA LPE TEQIFLLSQ + DN+KED+AWATYILLRNTNSISV   TQGALCVRGYWNSPN+IS  DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQSIGLSALKDA+YFPQISESGLWQMLP+GTRSVLVQP+VQNLKQSGNE++ MGGFILLASSLSYAFSDKDRAWIRA+ANKFD RAIL
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

XP_016899091.1 PREDICTED: protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucumis melo]

1.0e-140

92.39

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Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        MISSI SPSPLN+LTSA  FRAKSK  K PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFLKGAVPSGEATLPE TEQIFLLSQ V DN+KED+AWATYILLRNTNSISV   TQGALCVRGYWNSPN+IS  DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQSIGLSALKDA+YFPQISESGLWQMLP+GTRSVLVQP+VQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFD RAIL
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

XP_023542853.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Cucurbita pepo subsp. pepo]

1.1e-126

85.21

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Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        M  +I SP PL RL+S  RFRAK+ +K  P I+ARLDDSKNS N+QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAA  T AQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFL+GAVPSGEATLPE  EQIF+LSQ V DNVK+DLAWATYILLRNTNSISV    QG LCVRGYWNSPN+ISGTDLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFD
        QLQSIGLSAL DALYFPQISESGLWQMLP+GTRSVLVQP+ QNL QSGNEMEK+GGFIL+ASSLSYAFSDKDRAWIRALA KFD
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFD

XP_031738698.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1 [Cucumis sativus]

5.8e-136

88.18

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Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        MISSI SPSPLN+LTSA  FRAKSKTK  PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFLKGA+PSGEA LPE TEQIFLLSQ + DN+KED+AWATYILLRNTNSISV   TQGALCVRGYWNSPN+IS  DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQIS-------ESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQSIGLSALKDA+YFPQIS       ESGLWQMLP+GTRSVLVQP+VQNLKQSGNE++ MGGFILLASSLSYAFSDKDRAWIRA+ANKFD RAIL
Subjt:  QLQSIGLSALKDALYFPQIS-------ESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

XP_038884000.1 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic [Benincasa hispida]

3.0e-140

92.39

Show/hide

Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        MISSI SPSPLNRLTSA RFRAK+KTK  PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE
        ALG+SLAAFSIALPYLGKFLKGAVPSGEATLP  TEQIFLLSQ V DNVKEDLAWATYILLRNTNSISV    QGALCVRGYWNSPN+ISG DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQ IGLSALKDALYFPQISESGLWQMLPEGTRSVLVQP+VQNLKQ+G+EMEKMGGFILLASSLSYAF DKDRAWIRALANKFD RAIL
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

TrEMBL top hits

e value

%identity

Alignment

A0A0A0LBA9 Uncharacterized protein

2.3e-138

90.31

Show/hide

Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        MISSI SPSPLN+LTSA  FRAKSKTK  PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFLKGA+PSGEA LPE TEQIFLLSQ + DN+KED+AWATYILLRNTNSISV   TQGALCVRGYWNSPN+IS  DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQSIGLSALKDA+YFPQISESGLWQMLP+GTRSVLVQP+VQNLKQSGNE++ MGGFILLASSLSYAFSDKDRAWIRA+ANKFD RAIL
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

A0A1S4DSW9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

5.0e-141

92.39

Show/hide

Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        MISSI SPSPLN+LTSA  FRAKSK  K PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFLKGAVPSGEATLPE TEQIFLLSQ V DN+KED+AWATYILLRNTNSISV   TQGALCVRGYWNSPN+IS  DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQSIGLSALKDA+YFPQISESGLWQMLP+GTRSVLVQP+VQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFD RAIL
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

A0A5A7SUJ0 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2

5.0e-141

92.39

Show/hide

Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        MISSI SPSPLN+LTSA  FRAKSK  K PAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFLKGAVPSGEATLPE TEQIFLLSQ V DN+KED+AWATYILLRNTNSISV   TQGALCVRGYWNSPN+IS  DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQSIGLSALKDA+YFPQISESGLWQMLP+GTRSVLVQP+VQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFD RAIL
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

A0A6J1CJH9 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic isoform X1

5.0e-125

83.74

Show/hide

Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        M  SI SP+PL RLTS  RFRAK++  K PA+SARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHF GSNSAA TTPAQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE
        ALG+SLAAFSIALPYLGKFLKGAVPSGEA+LPE TEQIF+LSQ V DNVKEDLAWATYILLRNTNSISV    +G LCVRGYWNSPN+I G DL+AWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL
        QLQSIGLSAL D LYFPQIS+S LW+MLP GTRSVLVQP    +KQSGN+MEK+GGFILLASSLSYAFSDKDRAWIRALANKF  R IL
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

A0A6J1G0N4 protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

5.0e-125

84.15

Show/hide

Query:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE
        M  +I SP PL RL+S  RFRAK+ +K  P I+ARLDDSKNS ++QLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGS+SAA  T AQLRTE
Subjt:  MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTE

Query:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE
        ALGISLAAFSIALPYLGKFL+GAVPSGEATLPE  EQIF+LSQ+V DNVK+DLAWATYILLRNTNSISV    QG LCVRGYWNSPN+ISG DLLAWFEE
Subjt:  ALGISLAAFSIALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEE

Query:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFD
        QLQSIGLSAL DALYFPQISESGLWQMLP+GTRSVLVQP+ QNL QSGNEMEK+GGFIL+ASSLSYAFSDKDRAWIRALA KFD
Subjt:  QLQSIGLSALKDALYFPQISESGLWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFD

SwissProt top hits

e value

%identity

Alignment

Q9FJ81 Protein COFACTOR ASSEMBLY OF COMPLEX C SUBUNIT B CCB2, chloroplastic

2.8e-77

55.72

Show/hide

Query:  RFRAKSKTKKVPAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPY
        +F  + + ++   I AR ++      +++QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++A  + +Q+R+EALG+SLAAFSIALPY
Subjt:  RFRAKSKTKKVPAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPY

Query:  LGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEEQLQSIGLSALKDALY
        +GKFLKG+V   + +LPE  EQ+F++S  + D++KEDLAWATY+LLRNT++I+V    QG LCVRGYWN P+++S   L  WF++++  IGL+ +K+ LY
Subjt:  LGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEEQLQSIGLSALKDALY

Query:  FPQISESGL-WQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDG
        FPQ + S L   +LP+GTRS+ VQP+VQN     NE +K+ GF+L+AS+  YA+SDKDRAWI A+A KF G
Subjt:  FPQISESGL-WQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDG

Arabidopsis top hits

e value

%identity

Alignment

AT5G52110.1 Protein of unknown function (DUF2930)

2.0e-78

55.72

Show/hide

Query:  RFRAKSKTKKVPAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPY
        +F  + + ++   I AR ++      +++QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++A  + +Q+R+EALG+SLAAFSIALPY
Subjt:  RFRAKSKTKKVPAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPY

Query:  LGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEEQLQSIGLSALKDALY
        +GKFLKG+V   + +LPE  EQ+F++S  + D++KEDLAWATY+LLRNT++I+V    QG LCVRGYWN P+++S   L  WF++++  IGL+ +K+ LY
Subjt:  LGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEEQLQSIGLSALKDALY

Query:  FPQISESGL-WQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDG
        FPQ + S L   +LP+GTRS+ VQP+VQN     NE +K+ GF+L+AS+  YA+SDKDRAWI A+A KF G
Subjt:  FPQISESGL-WQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDG

AT5G52110.2 Protein of unknown function (DUF2930)

2.0e-78

55.72

Show/hide

Query:  RFRAKSKTKKVPAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPY
        +F  + + ++   I AR ++      +++QQLNLSVLRFT GIPG DESYLPRWIGYGFGSLLLLNHF   +++A  + +Q+R+EALG+SLAAFSIALPY
Subjt:  RFRAKSKTKKVPAISARLDD---SKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFSIALPY

Query:  LGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEEQLQSIGLSALKDALY
        +GKFLKG+V   + +LPE  EQ+F++S  + D++KEDLAWATY+LLRNT++I+V    QG LCVRGYWN P+++S   L  WF++++  IGL+ +K+ LY
Subjt:  LGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISV---TQGALCVRGYWNSPNEISGTDLLAWFEEQLQSIGLSALKDALY

Query:  FPQISESGL-WQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDG
        FPQ + S L   +LP+GTRS+ VQP+VQN     NE +K+ GF+L+AS+  YA+SDKDRAWI A+A KF G
Subjt:  FPQISESGL-WQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGATCAGCTCAATTTCCTCTCCCAGCCCGTTGAATCGGTTGACGTCCGCTTTCCGATTTCGCGCTAAAAGTAAGACGAAGAAGGTTCCAGCAATTTCTGCTCGTCTTGA
CGATTCTAAGAACTCAGCTAATCAGCAACTCAATCTCTCTGTCCTTCGGTTCACACTCGGGATTCCTGGGTTGGATGAGTCTTACTTACCCAGATGGATTGGATACGGAT
TTGGTTCACTTCTTCTATTGAATCACTTTGTTGGCTCGAATTCAGCCGCTCTCACCACCCCAGCACAGTTAAGAACTGAGGCTTTAGGCATTTCCTTGGCAGCATTTTCT
ATTGCACTCCCCTACTTGGGAAAGTTTCTTAAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCCCTGAAGTCACTGAGCAAATATTTCTCTTGTCACAAACTGTATTGGA
TAATGTGAAGGAAGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACTAACAGTATATCAGTGACTCAAGGGGCGTTATGTGTTCGAGGATACTGGAATAGTCCAA
ATGAAATATCAGGAACAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTATCTGCATTAAAGGATGCCCTCTATTTCCCTCAGATTTCAGAATCTGGA
CTGTGGCAAATGCTGCCCGAGGGCACTCGCTCAGTTTTGGTCCAACCGATGGTTCAAAATCTAAAGCAAAGTGGCAACGAGATGGAAAAGATGGGAGGATTCATACTGCT
GGCCTCAAGTTTAAGTTATGCATTTAGCGATAAAGATAGAGCCTGGATAAGAGCTCTTGCTAACAAGTTTGATGGCAGGGCCATCCTCTGA

mRNA sequence

Show/hide mRNA sequence

CGCTGCTGCAGTTCTAAAAAATATTTGGAATAATCCAACACCCATGCCCAACAGAATTCTCATATCTGCTGTACTAAGAAAACTTAATTAGAAAATGTCAGTAATTCTAA
TCTCGTGGACGGGCTAAAAAAAAAAAAAAGAAAAATACTCCAACGAACGTTGTGAAGTGAACCAAGGAAATATCTTCACAGTTGAACTTGGCTCTTAATCTTATATTTTA
TCTCATTTTTTCATTTTTAATAAACATAATTTGCAATTTGATTGCACTGAAAAAAGAAAAAAAAAAGATTGCAATCTGATTATAATTATTCATCCAACTCAAATTGAATA
AGTGATTATGTAATGCCGTAGAAAAGTTCATTGAAATTGAACGGATTTGGATGAGGATCGAACGGAGAAGTGTCCGGCCGGTCCTTTGACCCTCGGTAGAATTCAGAGAA
GTTTCTAATGTAGTTCGTTTTCTCGATTGCCAAACAAGGAAAGATCATGATCAGCTCAATTTCCTCTCCCAGCCCGTTGAATCGGTTGACGTCCGCTTTCCGATTTCGCG
CTAAAAGTAAGACGAAGAAGGTTCCAGCAATTTCTGCTCGTCTTGACGATTCTAAGAACTCAGCTAATCAGCAACTCAATCTCTCTGTCCTTCGGTTCACACTCGGGATT
CCTGGGTTGGATGAGTCTTACTTACCCAGATGGATTGGATACGGATTTGGTTCACTTCTTCTATTGAATCACTTTGTTGGCTCGAATTCAGCCGCTCTCACCACCCCAGC
ACAGTTAAGAACTGAGGCTTTAGGCATTTCCTTGGCAGCATTTTCTATTGCACTCCCCTACTTGGGAAAGTTTCTTAAGGGTGCAGTTCCATCTGGCGAAGCTACCCTCC
CTGAAGTCACTGAGCAAATATTTCTCTTGTCACAAACTGTATTGGATAATGTGAAGGAAGACTTGGCTTGGGCAACATACATCTTGCTGCGCAATACTAACAGTATATCA
GTGACTCAAGGGGCGTTATGTGTTCGAGGATACTGGAATAGTCCAAATGAAATATCAGGAACAGATTTACTTGCCTGGTTTGAGGAGCAGCTTCAGAGCATTGGCCTATC
TGCATTAAAGGATGCCCTCTATTTCCCTCAGATTTCAGAATCTGGACTGTGGCAAATGCTGCCCGAGGGCACTCGCTCAGTTTTGGTCCAACCGATGGTTCAAAATCTAA
AGCAAAGTGGCAACGAGATGGAAAAGATGGGAGGATTCATACTGCTGGCCTCAAGTTTAAGTTATGCATTTAGCGATAAAGATAGAGCCTGGATAAGAGCTCTTGCTAAC
AAGTTTGATGGCAGGGCCATCCTCTGA

Protein sequence

Show/hide protein sequence

MISSISSPSPLNRLTSAFRFRAKSKTKKVPAISARLDDSKNSANQQLNLSVLRFTLGIPGLDESYLPRWIGYGFGSLLLLNHFVGSNSAALTTPAQLRTEALGISLAAFS
IALPYLGKFLKGAVPSGEATLPEVTEQIFLLSQTVLDNVKEDLAWATYILLRNTNSISVTQGALCVRGYWNSPNEISGTDLLAWFEEQLQSIGLSALKDALYFPQISESG
LWQMLPEGTRSVLVQPMVQNLKQSGNEMEKMGGFILLASSLSYAFSDKDRAWIRALANKFDGRAIL

Lsi05G012580 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome