; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G012630 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G012630
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionLOB domain-containing protein
Genome locationchr05:20403274..20403957
RNA-Seq ExpressionLsi05G012630
SyntenyLsi05G012630
Gene Ontology termsNA
InterPro domainsIPR004883 - Lateral organ boundaries, LOB


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG7014789.1 LOB domain-containing protein 24, partial [Cucurbita argyrosperma subsp. argyrosperma]8.6e-7089.8Show/hide
Query:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MI GRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLP HLR EAAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAQIACLASNVQEPQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNS
        TRA+IA LASN+QE QL DFA +PIQGPN+I FS IGLSTPAH+FNS
Subjt:  TRAQIACLASNVQEPQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNS

XP_004140854.1 LOB domain-containing protein 24 [Cucumis sativus]3.1e-7291.33Show/hide
Query:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MI GRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLRAEAAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAQIACLASNVQE-PQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNSTF
        TRA+IAC+ASNVQE PQ QDFAFEPIQGPNS+ FS IGLSTPAH FNSTF
Subjt:  TRAQIACLASNVQE-PQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNSTF

XP_008439169.1 PREDICTED: LOB domain-containing protein 24-like [Cucumis melo]1.6e-7189.4Show/hide
Query:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MI GRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAQIACLASNVQE--PQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNSTF
        TRA+IAC+ASNVQE  PQLQDFAF+PIQGPNS+ FS IGLS+PAH FNS+F
Subjt:  TRAQIACLASNVQE--PQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNSTF

XP_022985104.1 LOB domain-containing protein 24-like [Cucurbita maxima]1.5e-6991.22Show/hide
Query:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MI GRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLP HLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAQIACLASNV-QEPQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNS
        TRA+IA LASN+ QE Q QDFA EPIQGPN+I FS IGLSTPAH+FNS
Subjt:  TRAQIACLASNV-QEPQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNS

XP_023522202.1 LOB domain-containing protein 24-like [Cucurbita pepo subsp. pepo]6.6e-7090.48Show/hide
Query:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MI GRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLP HLR EAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAQIACLASNVQEPQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNS
        TRA+IA LASN+QE Q QDFA +PIQGPN+I FS IGLSTPAH+FNS
Subjt:  TRAQIACLASNVQEPQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNS

TrEMBL top hitse value%identityAlignment
A0A0A0L9N7 LOB domain-containing protein1.5e-7291.33Show/hide
Query:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MI GRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLRAEAAETL FEAKCRIEDPVYGCVGIISQLQH+LHVAETQLAK
Subjt:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAQIACLASNVQE-PQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNSTF
        TRA+IAC+ASNVQE PQ QDFAFEPIQGPNS+ FS IGLSTPAH FNSTF
Subjt:  TRAQIACLASNVQE-PQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNSTF

A0A0A0LLX6 LOB domain-containing protein2.4e-5474.67Show/hide
Query:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MI  RCAACKYLRRRC S+CIFSP+FPSNNPQRFAIVHRIYGASNVAKFL Q+P  LR EAAETL+FEAKCRIEDP+YGCVGIISQLQ++LHVAETQLAK
Subjt:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAQIACLASNVQEPQLQDFAF-EPIQGPNSIEFSHIGLSTPAHFFNSTF
        TRA+IA LASN Q+ Q +DF F +P  GP        GLSTPAHF    F
Subjt:  TRAQIACLASNVQEPQLQDFAF-EPIQGPNSIEFSHIGLSTPAHFFNSTF

A0A1S3AY36 LOB domain-containing protein 24-like7.6e-7289.4Show/hide
Query:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MI GRCAACKYLRRRCPSDCIFSPFFPSNNPQRF IVHRIYGASNVAKFLHQLP HLR EAAETL FEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAQIACLASNVQE--PQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNSTF
        TRA+IAC+ASNVQE  PQLQDFAF+PIQGPNS+ FS IGLS+PAH FNS+F
Subjt:  TRAQIACLASNVQE--PQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNSTF

A0A6J1E5I6 LOB domain-containing protein 24-like3.9e-6888.44Show/hide
Query:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MI GRCAACKYLRRRC SDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLP HLR EAAE+LFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAQIACLASNVQEPQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNS
        TRA+IA LASN+QE Q  DFA +PIQGPN+I FS IGLSTPAH+FNS
Subjt:  TRAQIACLASNVQEPQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNS

A0A6J1JCD0 LOB domain-containing protein 24-like7.1e-7091.22Show/hide
Query:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
        MI GRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLP HLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK
Subjt:  MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAK

Query:  TRAQIACLASNV-QEPQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNS
        TRA+IA LASN+ QE Q QDFA EPIQGPN+I FS IGLSTPAH+FNS
Subjt:  TRAQIACLASNV-QEPQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNS

SwissProt top hitse value%identityAlignment
P59467 LOB domain-containing protein 238.1e-3962.07Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQ
        RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+A+
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQ

Query:  IACLASNVQEPQLQDF
        IA   + + +  + DF
Subjt:  IACLASNVQEPQLQDF

P59468 LOB domain-containing protein 248.1e-3962.93Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQ
        RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+A+
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQ

Query:  IACLASNVQEPQLQDF
        IA   + + + Q  DF
Subjt:  IACLASNVQEPQLQDF

Q8LBW3 LOB domain-containing protein 125.6e-3255.75Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQI
        CA+CK LRRRC  DCIF+P+FP ++P +FAIVH+++GASNV+K L +LP H RA+A  +L FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +A+I
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQI

Query:  ACLASNVQEPQLQ
         C+     EP LQ
Subjt:  ACLASNVQEPQLQ

Q9FKZ3 LOB domain-containing protein 363.8e-2851.49Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQI
        CAACK+LRR+C  +C+F+P+FP + PQ+FA VH+++GASNVAK L++L ++ R +A  +LF+EA+ R+ DPVYGCVG+IS LQH+L      L   + ++
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQI

Query:  A
        A
Subjt:  A

Q9SHE9 LOB domain-containing protein 41.8e-3056.31Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQI
        CAACK LRRRC  DC+FSP+FP++ PQ+FA VHR++GASNV K L +LP H R +A  ++ +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +A++
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQI

Query:  ACL
          L
Subjt:  ACL

Arabidopsis top hitse value%identityAlignment
AT1G31320.1 LOB domain-containing protein 41.3e-3156.31Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQI
        CAACK LRRRC  DC+FSP+FP++ PQ+FA VHR++GASNV K L +LP H R +A  ++ +EA  R+ DPVYGCVG IS LQ Q+ V + QLA  +A++
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQI

Query:  ACL
          L
Subjt:  ACL

AT2G30130.1 Lateral organ boundaries (LOB) domain family protein4.0e-3355.75Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQI
        CA+CK LRRRC  DCIF+P+FP ++P +FAIVH+++GASNV+K L +LP H RA+A  +L FEA  R+ DPVYGCVG IS LQ+Q+   + QLA  +A+I
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQI

Query:  ACLASNVQEPQLQ
         C+     EP LQ
Subjt:  ACLASNVQEPQLQ

AT3G26620.1 LOB domain-containing protein 235.8e-4062.07Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQ
        RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+A+
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQ

Query:  IACLASNVQEPQLQDF
        IA   + + +  + DF
Subjt:  IACLASNVQEPQLQDF

AT3G26660.1 LOB domain-containing protein 245.8e-4062.93Show/hide
Query:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQ
        RCAACKYLRRRCP DC+FSP+FP N+PQ+FA VHRIYGA NV+K L QLP   RAEA E+L FEAKCR++DPVYGCVGII  L+ Q+   + +LAKT+A+
Subjt:  RCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQ

Query:  IACLASNVQEPQLQDF
        IA   + + + Q  DF
Subjt:  IACLASNVQEPQLQDF

AT5G66870.1 ASYMMETRIC LEAVES 2-like 12.7e-2951.49Show/hide
Query:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQI
        CAACK+LRR+C  +C+F+P+FP + PQ+FA VH+++GASNVAK L++L ++ R +A  +LF+EA+ R+ DPVYGCVG+IS LQH+L      L   + ++
Subjt:  CAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQI

Query:  A
        A
Subjt:  A


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGATTTTTGGTCGTTGTGCGGCTTGTAAATATTTGAGAAGAAGATGTCCTTCGGATTGCATTTTTTCTCCTTTCTTTCCTTCCAATAATCCTCAAAGATTTGCCATTGT
TCATCGAATTTATGGTGCAAGTAATGTCGCTAAATTTCTCCATCAACTTCCTGCACATCTAAGAGCTGAAGCAGCAGAAACTTTATTTTTTGAAGCAAAATGCAGAATTG
AAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACACCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTCAGATTGCTTGTCTGGCTTCC
AATGTCCAAGAACCTCAACTCCAAGATTTTGCATTTGAGCCCATCCAAGGCCCAAATAGTATCGAATTCTCTCACATTGGGCTTTCCACTCCGGCCCATTTTTTTAATTC
TACCTTTTCTAATTCATAA
mRNA sequenceShow/hide mRNA sequence
ATGATTTTTGGTCGTTGTGCGGCTTGTAAATATTTGAGAAGAAGATGTCCTTCGGATTGCATTTTTTCTCCTTTCTTTCCTTCCAATAATCCTCAAAGATTTGCCATTGT
TCATCGAATTTATGGTGCAAGTAATGTCGCTAAATTTCTCCATCAACTTCCTGCACATCTAAGAGCTGAAGCAGCAGAAACTTTATTTTTTGAAGCAAAATGCAGAATTG
AAGATCCAGTTTATGGATGTGTTGGAATTATTTCTCAATTACAACACCAATTACACGTGGCAGAAACCCAGTTGGCCAAAACTCGGGCTCAGATTGCTTGTCTGGCTTCC
AATGTCCAAGAACCTCAACTCCAAGATTTTGCATTTGAGCCCATCCAAGGCCCAAATAGTATCGAATTCTCTCACATTGGGCTTTCCACTCCGGCCCATTTTTTTAATTC
TACCTTTTCTAATTCATAA
Protein sequenceShow/hide protein sequence
MIFGRCAACKYLRRRCPSDCIFSPFFPSNNPQRFAIVHRIYGASNVAKFLHQLPAHLRAEAAETLFFEAKCRIEDPVYGCVGIISQLQHQLHVAETQLAKTRAQIACLAS
NVQEPQLQDFAFEPIQGPNSIEFSHIGLSTPAHFFNSTFSNS