; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G013270 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G013270
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:21059460..21059708
RNA-Seq ExpressionLsi05G013270
SyntenyLsi05G013270
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067665.1 hypothetical protein E6C27_scaffold70G00340 [Cucumis melo var. makuwa]3.0e-2981.71Show/hide
Query:  MARDILPFEFGGGGGDGESGDGDIFFGKDDMKEYAWDGVYTEETVRFLETESAMKALRKRSKRRLESFNCFEFLKIVWCFKF
        MARDILPFEFGGGGG      GD+FFGKDDMKEYAWDGVYTEETVRF+ETESA KALRKRS+R+LE FNCFEFL+IV  FKF
Subjt:  MARDILPFEFGGGGGDGESGDGDIFFGKDDMKEYAWDGVYTEETVRFLETESAMKALRKRSKRRLESFNCFEFLKIVWCFKF

KAG6576802.1 hypothetical protein SDJN03_24376, partial [Cucurbita argyrosperma subsp. sororia]2.9e-2470.79Show/hide
Query:  MARDILPFEFG-GGGGDGESGD------GDIFFGKDDMKEYAWDGVYTEETVRFLETESAMKALRKRSKRRLESFNCFEFLKIVWCFKF
        MARD LP+EFG GGGG   S        GDIFFGKDDMK Y WD V+TEETVRFLETESA++ LRKRSKRRLE+F CFEFLK +WCF F
Subjt:  MARDILPFEFG-GGGGDGESGD------GDIFFGKDDMKEYAWDGVYTEETVRFLETESAMKALRKRSKRRLESFNCFEFLKIVWCFKF

KAG6600176.1 hypothetical protein SDJN03_05409, partial [Cucurbita argyrosperma subsp. sororia]5.0e-0851.28Show/hide
Query:  MARDILPFEFGGGGGDGESGD------------GDIFFGKDDMKEYAWDGVYTEETVRFLETESAMKALR-KRSKRRL
        MA D  PFEFGG G  G                GDIFFGKDDMKEYAWDG +TE+TVRF+ET      +  KRS   L
Subjt:  MARDILPFEFGGGGGDGESGD------------GDIFFGKDDMKEYAWDGVYTEETVRFLETESAMKALR-KRSKRRL

KAG7030840.1 hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]5.0e-0851.28Show/hide
Query:  MARDILPFEFGGGGGDGESGD------------GDIFFGKDDMKEYAWDGVYTEETVRFLETESAMKALR-KRSKRRL
        MA D  PFEFGG G  G                GDIFFGKDDMKEYAWDG +TE+TVRF+ET      +  KRS   L
Subjt:  MARDILPFEFGGGGGDGESGD------------GDIFFGKDDMKEYAWDGVYTEETVRFLETESAMKALR-KRSKRRL

KGN57263.1 hypothetical protein Csa_009618 [Cucumis sativus]1.1e-3185.37Show/hide
Query:  MARDILPFEFGGGGGDGESGDGDIFFGKDDMKEYAWDGVYTEETVRFLETESAMKALRKRSKRRLESFNCFEFLKIVWCFKF
        MARDILPFEFGGGG       GDIFFGKDDMKEYAWDGVYTEETVRF+ETESA KALRKRS+R+LE FNCFEFLKIVWCFKF
Subjt:  MARDILPFEFGGGGGDGESGDGDIFFGKDDMKEYAWDGVYTEETVRFLETESAMKALRKRSKRRLESFNCFEFLKIVWCFKF

TrEMBL top hitse value%identityAlignment
A0A0A0L658 Uncharacterized protein5.4e-3285.37Show/hide
Query:  MARDILPFEFGGGGGDGESGDGDIFFGKDDMKEYAWDGVYTEETVRFLETESAMKALRKRSKRRLESFNCFEFLKIVWCFKF
        MARDILPFEFGGGG       GDIFFGKDDMKEYAWDGVYTEETVRF+ETESA KALRKRS+R+LE FNCFEFLKIVWCFKF
Subjt:  MARDILPFEFGGGGGDGESGDGDIFFGKDDMKEYAWDGVYTEETVRFLETESAMKALRKRSKRRLESFNCFEFLKIVWCFKF

A0A5D3DK72 Uncharacterized protein1.5e-2981.71Show/hide
Query:  MARDILPFEFGGGGGDGESGDGDIFFGKDDMKEYAWDGVYTEETVRFLETESAMKALRKRSKRRLESFNCFEFLKIVWCFKF
        MARDILPFEFGGGGG      GD+FFGKDDMKEYAWDGVYTEETVRF+ETESA KALRKRS+R+LE FNCFEFL+IV  FKF
Subjt:  MARDILPFEFGGGGGDGESGDGDIFFGKDDMKEYAWDGVYTEETVRFLETESAMKALRKRSKRRLESFNCFEFLKIVWCFKF

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCAGAGATATTCTTCCCTTCGAATTTGGCGGCGGCGGTGGCGACGGCGAGAGCGGCGACGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGCATGGGA
TGGAGTTTACACAGAAGAAACAGTCCGATTCCTGGAAACAGAGTCCGCCATGAAAGCTCTGAGAAAGAGAAGCAAAAGAAGGCTAGAATCATTCAATTGCTTTGAGTTTT
TGAAAATCGTGTGGTGCTTCAAATTCTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCCAGAGATATTCTTCCCTTCGAATTTGGCGGCGGCGGTGGCGACGGCGAGAGCGGCGACGGAGACATTTTCTTCGGTAAGGATGATATGAAAGAATACGCATGGGA
TGGAGTTTACACAGAAGAAACAGTCCGATTCCTGGAAACAGAGTCCGCCATGAAAGCTCTGAGAAAGAGAAGCAAAAGAAGGCTAGAATCATTCAATTGCTTTGAGTTTT
TGAAAATCGTGTGGTGCTTCAAATTCTAA
Protein sequenceShow/hide protein sequence
MARDILPFEFGGGGGDGESGDGDIFFGKDDMKEYAWDGVYTEETVRFLETESAMKALRKRSKRRLESFNCFEFLKIVWCFKF