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Lsi05G013290 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G013290
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:21079013..21079463
RNA-Seq ExpressionLsi05G013290
SyntenyLsi05G013290
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067663.1 hypothetical protein E6C27_scaffold70G00320 [Cucumis melo var. makuwa]4.4e-0552.11Show/hide
Query:  LKISLVFKLLVFFALLLITS-PISITNN-----APHIWKMGVEYKNVGKDVVVAEAKRPFFADAPWEGGYI
        +KISL+ KLL F  LL I S  +S TNN      P I KMGVEYK   K VVV +  RP   D PW GGY+
Subjt:  LKISLVFKLLVFFALLLITS-PISITNN-----APHIWKMGVEYKNVGKDVVVAEAKRPFFADAPWEGGYI

KAG6600177.1 hypothetical protein SDJN03_05410, partial [Cucurbita argyrosperma subsp. sororia]2.4e-1166.2Show/hide
Query:  MVSLK-ISLVFKLLVFFALLLITSPISITNNAPHIWKMGVEYKNVGKDVVVAEAKRPFFADAPWEGGYIKP
        MVSLK IS V KLLV FALLLI SPIS  +N P I KMG+EYK VGK VVVA+  R   AD+PW GGY  P
Subjt:  MVSLK-ISLVFKLLVFFALLLITSPISITNNAPHIWKMGVEYKNVGKDVVVAEAKRPFFADAPWEGGYIKP

KAG7030840.1 hypothetical protein SDJN02_04877, partial [Cucurbita argyrosperma subsp. argyrosperma]3.9e-0964.41Show/hide
Query:  LLVFFALLLITSPISITNNAPHIWKMGVEYKNVGKDVVVAEAKRPFFADAPWEGGYIKP
        LLV FALLLI SPIS  +N P I KMG+EYK VGK VVVA+  R   AD+PW GGY  P
Subjt:  LLVFFALLLITSPISITNNAPHIWKMGVEYKNVGKDVVVAEAKRPFFADAPWEGGYIKP

XP_022141390.1 uncharacterized protein LOC111011803 [Momordica charantia]4.9e-0448.65Show/hide
Query:  MVSLKISLVFKLLVFFALLLITSPISIT----NNAPHIWKMGVEYKNVGKDVVVAEAKRPFFADAPWEGGYIKP
        M SL+IS V KL  FFALLLI S +S +    +  P I K+G+EY++VGK V+ A+A      D PW+GGY  P
Subjt:  MVSLKISLVFKLLVFFALLLITSPISIT----NNAPHIWKMGVEYKNVGKDVVVAEAKRPFFADAPWEGGYIKP

TrEMBL top hitse value%identityAlignment
A0A0A0L653 Uncharacterized protein9.0e-0448.65Show/hide
Query:  KISLVFKLLVFFALLLITSPISITNNA-------PHIWKMGVEYK-NVGKDVVVAEAKRPFFADAPWEGGYIKP
        +I L+ KLL FF+LLLI S +S TNN        P I K+GV+ K N GK  VV    +P   D PW GGYI P
Subjt:  KISLVFKLLVFFALLLITSPISITNNA-------PHIWKMGVEYK-NVGKDVVVAEAKRPFFADAPWEGGYIKP

A0A0A0L8B2 Uncharacterized protein9.0e-0447.22Show/hide
Query:  LKISLVFKLLVFFALLLIT-SPISITNN-----APHIWKMGVEYKNVGKDVVVAEAKRPFFADAPWEGGYIK
        +KISL+ KLL F  LL I  + IS TNN      P I KM V Y+   K VVV +  +P  AD PW GGY++
Subjt:  LKISLVFKLLVFFALLLIT-SPISITNN-----APHIWKMGVEYKNVGKDVVVAEAKRPFFADAPWEGGYIK

A0A5D3DJ60 Uncharacterized protein2.2e-0552.11Show/hide
Query:  LKISLVFKLLVFFALLLITS-PISITNN-----APHIWKMGVEYKNVGKDVVVAEAKRPFFADAPWEGGYI
        +KISL+ KLL F  LL I S  +S TNN      P I KMGVEYK   K VVV +  RP   D PW GGY+
Subjt:  LKISLVFKLLVFFALLLITS-PISITNN-----APHIWKMGVEYKNVGKDVVVAEAKRPFFADAPWEGGYI

A0A6J1CHY3 uncharacterized protein LOC1110118032.4e-0448.65Show/hide
Query:  MVSLKISLVFKLLVFFALLLITSPISIT----NNAPHIWKMGVEYKNVGKDVVVAEAKRPFFADAPWEGGYIKP
        M SL+IS V KL  FFALLLI S +S +    +  P I K+G+EY++VGK V+ A+A      D PW+GGY  P
Subjt:  MVSLKISLVFKLLVFFALLLITSPISIT----NNAPHIWKMGVEYKNVGKDVVVAEAKRPFFADAPWEGGYIKP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGTGTCTCTCAAGATTTCCCTTGTGTTTAAACTCTTAGTTTTCTTTGCATTGCTTCTCATTACCTCTCCCATTTCTATCACTAACAATGCTCCTCATATTTGGAAGAT
GGGTGTTGAGTACAAAAATGTAGGGAAGGATGTGGTGGTAGCAGAAGCAAAGAGACCATTTTTTGCTGATGCCCCTTGGGAGGGTGGTTATATCAAGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGTGTCTCTCAAGATTTCCCTTGTGTTTAAACTCTTAGTTTTCTTTGCATTGCTTCTCATTACCTCTCCCATTTCTATCACTAACAATGCTCCTCATATTTGGAAGAT
GGGTGTTGAGTACAAAAATGTAGGGAAGGATGTGGTGGTAGCAGAAGCAAAGAGACCATTTTTTGCTGATGCCCCTTGGGAGGGTGGTTATATCAAGCCTTGA
Protein sequenceShow/hide protein sequence
MVSLKISLVFKLLVFFALLLITSPISITNNAPHIWKMGVEYKNVGKDVVVAEAKRPFFADAPWEGGYIKP