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Lsi05G013300 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G013300
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:21081394..21082029
RNA-Seq ExpressionLsi05G013300
SyntenyLsi05G013300
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6576804.1 hypothetical protein SDJN03_24378, partial [Cucurbita argyrosperma subsp. sororia]2.6e-0653.49Show/hide
Query:  MAS-TTLVAWKKAIFFVLLLLAFNVSAREL-----VAPTTRESSMAMEMNGVM-ERKLIVGQLDMSWKGNYFPPP--RPPPRPRSS
        MAS T LVAWKK  F   LL+A +VSAREL     V  T RE  MA   NGV+   +LI  QLD +W+G+Y PPP   PPP P SS
Subjt:  MAS-TTLVAWKKAIFFVLLLLAFNVSAREL-----VAPTTRESSMAMEMNGVM-ERKLIVGQLDMSWKGNYFPPP--RPPPRPRSS
KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]3.6e-0857.32Show/hide
Query:  MAS-TTLVAWKKAIFFVLLLLAFNVSAREL-----VAPTTRESSMAMEMNGVMERKLIVGQLDMSWKGNYFPPP--RPPPRP
        MAS +  V WK+ +FF LLLLAFNVSAREL     VA T  E  M +E N  + R+LI  QLD SW GNY PPP  RPPP P
Subjt:  MAS-TTLVAWKKAIFFVLLLLAFNVSAREL-----VAPTTRESSMAMEMNGVMERKLIVGQLDMSWKGNYFPPP--RPPPRP
KAG7014831.1 hypothetical protein SDJN02_22460, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-0653.49Show/hide
Query:  MAS-TTLVAWKKAIFFVLLLLAFNVSAREL-----VAPTTRESSMAMEMNGV-MERKLIVGQLDMSWKGNYFPPP--RPPPRPRSS
        MAS T LVAWKK  F   LL+A +VSAREL     V  T RE  MA   NGV +  +LI  QLD +W+G+Y PPP   PPP P SS
Subjt:  MAS-TTLVAWKKAIFFVLLLLAFNVSAREL-----VAPTTRESSMAMEMNGV-MERKLIVGQLDMSWKGNYFPPP--RPPPRPRSS
KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]4.7e-0856.63Show/hide
Query:  MAS-TTLVAWKKAIFFVLLLLAFNVSAREL-----VAPTTRESSMAMEMNGVMERKLIVGQLDMSWKGNYFPPP---RPPPRP
        MAS +  V WK+ +FF LLLLAFNVSAREL     VA T  E  M +E N  + R+LI  QLD SW GNY PPP   RPPP P
Subjt:  MAS-TTLVAWKKAIFFVLLLLAFNVSAREL-----VAPTTRESSMAMEMNGVMERKLIVGQLDMSWKGNYFPPP---RPPPRP
KGN57260.1 hypothetical protein Csa_011296 [Cucumis sativus]1.4e-1566.22Show/hide
Query:  MASTTL--VAWKKA-IFFVLLLLAFNVSARELVAPTTRESSMAMEMNGVMERKLIVGQLDMSWKGNYFPPPRPP
        MA+ T+  VAWKK  IFF LLLLA+N+SARELVA TT E S+  EMN V++R+L V QLD SW+GNYFPPP+PP
Subjt:  MASTTL--VAWKKA-IFFVLLLLAFNVSARELVAPTTRESSMAMEMNGVMERKLIVGQLDMSWKGNYFPPPRPP
TrEMBL top hitse value%identityAlignment
A0A0A0L5K7 Uncharacterized protein6.6e-1666.22Show/hide
Query:  MASTTL--VAWKKA-IFFVLLLLAFNVSARELVAPTTRESSMAMEMNGVMERKLIVGQLDMSWKGNYFPPPRPP
        MA+ T+  VAWKK  IFF LLLLA+N+SARELVA TT E S+  EMN V++R+L V QLD SW+GNYFPPP+PP
Subjt:  MASTTL--VAWKKA-IFFVLLLLAFNVSARELVAPTTRESSMAMEMNGVMERKLIVGQLDMSWKGNYFPPPRPP
A0A0A0LB11 Uncharacterized protein6.2e-0656.25Show/hide
Query:  IFFVLLLLAFNVSARELVAPTTRESSMAMEMNGVMERKLIVGQLDMSWKGNYFPPP--RPPPRP
        +FF LLLLAFN S   L  P      +A+E N  M RKL   QLD SWKGNY PPP  RPPP P
Subjt:  IFFVLLLLAFNVSARELVAPTTRESSMAMEMNGVMERKLIVGQLDMSWKGNYFPPP--RPPPRP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTCAACAACTTTGGTTGCTTGGAAGAAAGCTATCTTTTTCGTTTTGCTTCTTCTTGCTTTCAACGTCTCGGCGAGAGAACTTGTCGCTCCCACGACCCGTGAGTC
GTCCATGGCGATGGAGATGAATGGTGTGATGGAAAGGAAATTAATTGTTGGACAGTTGGATATGTCTTGGAAAGGAAATTATTTTCCTCCTCCTCGGCCTCCTCCTCGTC
CTCGTTCCTCCTAA
mRNA sequenceShow/hide mRNA sequence
ACACAAACACCAAAGTCTCTCTCTAATTCCACACAATTCTTTCTGAGCTTTCTACAATCACCAAACTAATTAATGGCTTCAACAACTTTGGTTGCTTGGAAGAAAGCTAT
CTTTTTCGTTTTGCTTCTTCTTGCTTTCAACGTCTCGGCGAGAGAACTTGTCGCTCCCACGACCCGTGAGTCGTCCATGGCGATGGAGATGAATGGTGTGATGGAAAGGA
AATTAATTGTTGGACAGTTGGATATGTCTTGGAAAGGAAATTATTTTCCTCCTCCTCGGCCTCCTCCTCGTCCTCGTTCCTCCTAAGGGAGAAGTGTTGAAGATGAATGT
TTTTATCTTTAATTACCCTTTTCCTTTTGGCTTTTGTTGGGTTTGTATTAATAAGGATCTCCCGTACAAGTTTTGTATGAAGAATTTCTTTTCCTTTAAGAATGTGGCTT
TTTTTAATGGCCTTGTGTGTGTTTTGATAGTTAACTTTTATGGAATTAATTACAAATTCATGTTTGGAATGACTTAG
Protein sequenceShow/hide protein sequence
MASTTLVAWKKAIFFVLLLLAFNVSARELVAPTTRESSMAMEMNGVMERKLIVGQLDMSWKGNYFPPPRPPPRPRSS