; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G013310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G013310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:21086208..21089304
RNA-Seq ExpressionLsi05G013310
SyntenyLsi05G013310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0067663.1 hypothetical protein E6C27_scaffold70G00320 [Cucumis melo var. makuwa]5.7e-1459.52Show/hide
Query:  ASPRRISLVFKLLSFALLLIF--SVVSTTNNIEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGYIHHPHLSN
        +SP +ISL+ KLL FA LL    + VS TNNI P LHK  IRKMGVEY K   E  VVVPKV +P+S+D PWGGGY+H P + N
Subjt:  ASPRRISLVFKLLSFALLLIF--SVVSTTNNIEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGYIHHPHLSN

KAE8650426.1 hypothetical protein Csa_009889 [Cucumis sativus]1.0e-1867.06Show/hide
Query:  MASPRRISLVFKLLSFALLLIFSVVSTTNN-IEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGYIHHPHLSNP
        MASP RI L+ KLL F+LLLIFS VSTTNN ++P  HK RIRK+GV+   N  +   VVP+V+KP+SEDFPWGGGYI HPHLSNP
Subjt:  MASPRRISLVFKLLSFALLLIFSVVSTTNN-IEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGYIHHPHLSNP

KAE8650427.1 hypothetical protein Csa_010020 [Cucumis sativus]6.3e-1356.67Show/hide
Query:  LLSNMA-SPRRISLVFKLLSFALLLI--FSVVSTTNNIEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGYIHHPHLSN
        ++S MA SP +ISL+ KLL FA LL   ++ +S TNNI P LHK  IRKM V Y K   E  VVVPKV KP+S DFPWGGGY+  P + N
Subjt:  LLSNMA-SPRRISLVFKLLSFALLLI--FSVVSTTNNIEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGYIHHPHLSN

KAG6600177.1 hypothetical protein SDJN03_05410, partial [Cucurbita argyrosperma subsp. sororia]9.2e-0450Show/hide
Query:  MASPRRISLVFKLL-SFALLLIFSVVSTTNNIEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGY
        M S + IS V KLL  FALLLI S +S  +N        RIRKMG+EY   +V   VVV K ++  S D PWGGGY
Subjt:  MASPRRISLVFKLL-SFALLLIFSVVSTTNNIEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGY

KAG7014832.1 hypothetical protein SDJN02_22461 [Cucurbita argyrosperma subsp. argyrosperma]3.7e-0547.06Show/hide
Query:  MASPR--RISLVFKLLSFALLLIFSVVSTTNNIEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGYIHHPHLSN
        MASPR  RISL+ +LL FALLL+ S  S  N+ +  LH  R  KM +EY        V      KP+++D PWGGGY+  P LSN
Subjt:  MASPR--RISLVFKLLSFALLLIFSVVSTTNNIEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGYIHHPHLSN

TrEMBL top hitse value%identityAlignment
A0A0A0L653 Uncharacterized protein4.9e-1967.06Show/hide
Query:  MASPRRISLVFKLLSFALLLIFSVVSTTNN-IEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGYIHHPHLSNP
        MASP RI L+ KLL F+LLLIFS VSTTNN ++P  HK RIRK+GV+   N  +   VVP+V+KP+SEDFPWGGGYI HPHLSNP
Subjt:  MASPRRISLVFKLLSFALLLIFSVVSTTNN-IEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGYIHHPHLSNP

A0A0A0L8B2 Uncharacterized protein3.1e-1357.14Show/hide
Query:  ASPRRISLVFKLLSFALLLI--FSVVSTTNNIEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGYIHHPHLSN
        +SP +ISL+ KLL FA LL   ++ +S TNNI P LHK  IRKM V Y K   E  VVVPKV KP+S DFPWGGGY+  P + N
Subjt:  ASPRRISLVFKLLSFALLLI--FSVVSTTNNIEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGYIHHPHLSN

A0A5D3DJ60 Uncharacterized protein2.8e-1459.52Show/hide
Query:  ASPRRISLVFKLLSFALLLIF--SVVSTTNNIEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGYIHHPHLSN
        +SP +ISL+ KLL FA LL    + VS TNNI P LHK  IRKMGVEY K   E  VVVPKV +P+S+D PWGGGY+H P + N
Subjt:  ASPRRISLVFKLLSFALLLIF--SVVSTTNNIEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMKPSSEDFPWGGGYIHHPHLSN

A0A6J1CHY3 uncharacterized protein LOC1110118039.9e-0444.25Show/hide
Query:  LLIASTVSATNNIPLLHKPRILLSNMASPRRISLVFKLLSFALLLIFSVVSTTNNIEPSLHK-SRIRKMGVEYYKNVVEDNVVVPKVM---KPSSEDFPW
        L I S +SAT+           L+ MAS  RIS V KL  FALLLI S VS +    PS+HK  RIRK+G+EY          V K +   K +S DFPW
Subjt:  LLIASTVSATNNIPLLHKPRILLSNMASPRRISLVFKLLSFALLLIFSVVSTTNNIEPSLHK-SRIRKMGVEYYKNVVEDNVVVPKVM---KPSSEDFPW

Query:  GGGYIHHPHLSNP
         GGY  +P  +NP
Subjt:  GGGYIHHPHLSNP

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCTCTCAAAAATGGGATTCCCCACGAGGACTTCCCTTGTTTTGAAGCTGTTTTTCTTTGCTTTGCTTCTCATTGCCTCTACTGTTTCTGCAACCAACAACATTCCTTT
GCTCCACAAACCTCGTATTCTACTCTCAAATATGGCTTCCCCTAGGAGGATTTCCCTTGTCTTCAAGCTTCTTTCCTTTGCTTTGCTCCTCATTTTCTCTGTTGTTTCCA
CAACCAACAACATCGAGCCTTCGCTCCACAAGTCTCGTATTCGTAAAATGGGTGTGGAGTACTACAAAAATGTTGTGGAGGATAATGTTGTTGTACCAAAAGTAATGAAA
CCAAGTTCAGAGGATTTCCCATGGGGGGGAGGTTATATTCATCATCCACACTTAAGCAACCCATGA
mRNA sequenceShow/hide mRNA sequence
CCTTCAAGCTTATTAATGCTCTCAAAAATGGGATTCCCCACGAGGACTTCCCTTGTTTTGAAGCTGTTTTTCTTTGCTTTGCTTCTCATTGCCTCTACTGTTTCTGCAAC
CAACAACATTCCTTTGCTCCACAAACCTCGTATTCTACTCTCAAATATGGCTTCCCCTAGGAGGATTTCCCTTGTCTTCAAGCTTCTTTCCTTTGCTTTGCTCCTCATTT
TCTCTGTTGTTTCCACAACCAACAACATCGAGCCTTCGCTCCACAAGTCTCGTATTCGTAAAATGGGTGTGGAGTACTACAAAAATGTTGTGGAGGATAATGTTGTTGTA
CCAAAAGTAATGAAACCAAGTTCAGAGGATTTCCCATGGGGGGGAGGTTATATTCATCATCCACACTTAAGCAACCCATGATGACATTTATAACTATGTTTGGATATATA
TGATCAGTTGTCTTTTTCTTTGGTTGGTGTTGGTTGACTTTTTGGAACCATCAATCTCATGTTCTTAACCCTAAACCCTATAAATTAAATTAAACTAATTGTTATTTCTC
TCTTATATATT
Protein sequenceShow/hide protein sequence
MLSKMGFPTRTSLVLKLFFFALLLIASTVSATNNIPLLHKPRILLSNMASPRRISLVFKLLSFALLLIFSVVSTTNNIEPSLHKSRIRKMGVEYYKNVVEDNVVVPKVMK
PSSEDFPWGGGYIHHPHLSNP