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Lsi05G013320 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G013320
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:21095417..21096761
RNA-Seq ExpressionLsi05G013320
SyntenyLsi05G013320
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6600178.1 hypothetical protein SDJN03_05411, partial [Cucurbita argyrosperma subsp. sororia]6.6e-0855Show/hide
Query:  STAAFI--AKVVFFALLLLAFDVSARDLVDETNNVAPIIRKTGMETKVVNLRCRRLIARELDGAWRGNYANPPPPFSPIP
        S +AF+   +VVFFALLLLAF+VSAR+LV  TN VA  + +  +ET V     RRLIAR+LD +W GNY+ PPP   P P
Subjt:  STAAFI--AKVVFFALLLLAFDVSARDLVDETNNVAPIIRKTGMETKVVNLRCRRLIARELDGAWRGNYANPPPPFSPIP
KAG7030841.1 hypothetical protein SDJN02_04878 [Cucurbita argyrosperma subsp. argyrosperma]6.6e-0855Show/hide
Query:  STAAFI--AKVVFFALLLLAFDVSARDLVDETNNVAPIIRKTGMETKVVNLRCRRLIARELDGAWRGNYANPPPPFSPIP
        S +AF+   +VVFFALLLLAF+VSAR+LV  TN VA  + +  +ET V     RRLIAR+LD +W GNY+ PPP   P P
Subjt:  STAAFI--AKVVFFALLLLAFDVSARDLVDETNNVAPIIRKTGMETKVVNLRCRRLIARELDGAWRGNYANPPPPFSPIP
KGN57257.1 hypothetical protein Csa_010805 [Cucumis sativus]4.6e-0959.21Show/hide
Query:  YSTAAFIAKVVFFALLLL-AFDVSARDLVDETNNVAPIIRKTGMETK-VVNLRCRRLIARELD-GAWRGNYANPPP
        +S  AFI KVV FALLLL +F+VSA + + ETN  A I  KT +E K V N +CRRLIARE D   W GNYA PPP
Subjt:  YSTAAFIAKVVFFALLLL-AFDVSARDLVDETNNVAPIIRKTGMETK-VVNLRCRRLIARELD-GAWRGNYANPPP
TrEMBL top hitse value%identityAlignment
A0A0A0L5K7 Uncharacterized protein6.3e-0439.47Show/hide
Query:  AYYSTAAFIAKVVFFALLLLAFDVSARDLVDETNNVAPIIRKTGMETKVVNLRCRRLIARELDGAWRGNYANPPPP
        A  ++ A+   ++FF LLLLA+++SAR+LV  T        +  + T++ ++  RRL  R+LD +WRGNY  PP P
Subjt:  AYYSTAAFIAKVVFFALLLLAFDVSARDLVDETNNVAPIIRKTGMETKVVNLRCRRLIARELDGAWRGNYANPPPP
A0A0A0L9E5 Uncharacterized protein2.2e-0959.21Show/hide
Query:  YSTAAFIAKVVFFALLLL-AFDVSARDLVDETNNVAPIIRKTGMETK-VVNLRCRRLIARELD-GAWRGNYANPPP
        +S  AFI KVV FALLLL +F+VSA + + ETN  A I  KT +E K V N +CRRLIARE D   W GNYA PPP
Subjt:  YSTAAFIAKVVFFALLLL-AFDVSARDLVDETNNVAPIIRKTGMETK-VVNLRCRRLIARELD-GAWRGNYANPPP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCTTATTATTCCACAGCAGCTTTCATTGCTAAGGTTGTCTTCTTTGCTTTGCTGCTTCTTGCTTTCGATGTTTCCGCGAGGGACCTCGTTGATGAAACCAATAACGT
GGCTCCGATAATTCGTAAGACAGGGATGGAGACAAAGGTTGTGAATTTGAGATGTAGAAGATTAATTGCTCGAGAGTTGGATGGGGCTTGGAGAGGAAATTATGCAAACC
CTCCTCCTCCATTCTCTCCCATTCCTGTTTAA
mRNA sequenceShow/hide mRNA sequence
ATGGCTTATTATTCCACAGCAGCTTTCATTGCTAAGGTTGTCTTCTTTGCTTTGCTGCTTCTTGCTTTCGATGTTTCCGCGAGGGACCTCGTTGATGAAACCAATAACGT
GGCTCCGATAATTCGTAAGACAGGGATGGAGACAAAGGTTGTGAATTTGAGATGTAGAAGATTAATTGCTCGAGAGTTGGATGGGGCTTGGAGAGGAAATTATGCAAACC
CTCCTCCTCCATTCTCTCCCATTCCTGTTTAA
Protein sequenceShow/hide protein sequence
MAYYSTAAFIAKVVFFALLLLAFDVSARDLVDETNNVAPIIRKTGMETKVVNLRCRRLIARELDGAWRGNYANPPPPFSPIPV