; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G013600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G013600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein RALF-like 32
Genome locationchr05:21493065..21493406
RNA-Seq ExpressionLsi05G013600
SyntenyLsi05G013600
Gene Ontology termsGO:0110165 - cellular anatomical structure (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582109.1 Protein RALF-like 1, partial [Cucurbita argyrosperma subsp. sororia]4.0e-3268.14Show/hide
Query:  MKGSSSHQSLRLVLGLLYLLIFSS-TVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANP
        M+GSSSH SL LVLGLLYLLIF++  VVVAVDS + PCNGSIAECY+E E LMESEISRRFL + PK ++Y+ L K+KA C  G GKPY   C+P EANP
Subjt:  MKGSSSHQSLRLVLGLLYLLIFSS-TVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANP

Query:  YNRGCSGIYNRCR
        Y+R CSG YNRC+
Subjt:  YNRGCSGIYNRCR

KAG6582127.1 Protein RALF-like 32, partial [Cucurbita argyrosperma subsp. sororia]1.6e-1759.41Show/hide
Query:  LLYLLIFSSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCN-KGEGKPYGK--NCKPSEANPYNRGCSGIYNRCR
        LL+LL+     +V   SS   CNGSIAEC  EEE LMESEISRRFLAQ  KYIS   L KD   C+  G G+PY K  +C P  ANPYNRGCS IY RCR
Subjt:  LLYLLIFSSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCN-KGEGKPYGK--NCKPSEANPYNRGCSGIYNRCR

Query:  T
        +
Subjt:  T

XP_004147646.3 protein RALF-like 32 [Cucumis sativus]2.1e-1754.05Show/hide
Query:  SHQSLRLVLGLLYLLIFSSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGE-GKPYGK--NCKPSEANPYNR
        S Q+  L+L  L+L +F    +V   SS   CNGSIAEC  EEEMLMESEI+RRFL Q  KYIS   L KD   C+    G+PY +  +C P  ANPYNR
Subjt:  SHQSLRLVLGLLYLLIFSSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGE-GKPYGK--NCKPSEANPYNR

Query:  GCSGIYNRCRT
        GCS IY RCR+
Subjt:  GCSGIYNRCRT

XP_022138044.1 protein RALF-like 32 [Momordica charantia]1.0e-2253.28Show/hide
Query:  MKGSSSHQSLRLVLGLLYLLIF-------SSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGK--N
        MKGS      R    L+++LI         + V   + +SM PCNGSIAECY EEEMLMESEISRRFL Q  KYISYD L KD+  C  G+GKPY K  +
Subjt:  MKGSSSHQSLRLVLGLLYLLIF-------SSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGK--N

Query:  CKPSEANPYNRGCSGIYNRCRT
        C P  +NPY+RGC  IY RC++
Subjt:  CKPSEANPYNRGCSGIYNRCRT

XP_022138261.1 protein RALF-like 32 [Momordica charantia]1.2e-2059.79Show/hide
Query:  LLIFSSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPY--GKNCKPSEANPYNRGCSGIYNRCRT
        LL F++ V + V SSM PCNGSI+ECY EEE L ESEISRRFL Q  KYISYD   KD+  C  G+GKPY   ++C P  +NPY+RGCS IY RC++
Subjt:  LLIFSSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPY--GKNCKPSEANPYNRGCSGIYNRCRT

TrEMBL top hitse value%identityAlignment
A0A314L8Z7 Protein ralf-like 322.3e-1752.08Show/hide
Query:  YLLIFSSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCN-KGEGKPYGKNCKPSEANPYNRGCSGIYNRCR
        + L  S   ++   +S  PCNG+IAEC EE E+LMES+ISRRFL +  KYIS   L +D+  CN  G G+PY ++C P  +NPYNRGCS  Y RCR
Subjt:  YLLIFSSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCN-KGEGKPYGKNCKPSEANPYNRGCSGIYNRCR

A0A5A7VKE5 Protein RALF-like 325.2e-1755.14Show/hide
Query:  LRLVLGLLYLLIFSSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGE-GKPYGK--NCKPSEANPYNRGCSG
        L L+L LL+L +     +V   SS   CNGSIAEC  E+EMLMESEISRRFLAQ  KYIS   L KD   C+    G+PY K  +C P  ANPY+RGC  
Subjt:  LRLVLGLLYLLIFSSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGE-GKPYGK--NCKPSEANPYNRGCSG

Query:  IYNRCRT
        IY RCR+
Subjt:  IYNRCRT

A0A6J1C8Z5 protein RALF-like 324.8e-2353.28Show/hide
Query:  MKGSSSHQSLRLVLGLLYLLIF-------SSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGK--N
        MKGS      R    L+++LI         + V   + +SM PCNGSIAECY EEEMLMESEISRRFL Q  KYISYD L KD+  C  G+GKPY K  +
Subjt:  MKGSSSHQSLRLVLGLLYLLIF-------SSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGK--N

Query:  CKPSEANPYNRGCSGIYNRCRT
        C P  +NPY+RGC  IY RC++
Subjt:  CKPSEANPYNRGCSGIYNRCRT

A0A6J1C986 protein RALF-like 325.9e-2159.79Show/hide
Query:  LLIFSSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPY--GKNCKPSEANPYNRGCSGIYNRCRT
        LL F++ V + V SSM PCNGSI+ECY EEE L ESEISRRFL Q  KYISYD   KD+  C  G+GKPY   ++C P  +NPY+RGCS IY RC++
Subjt:  LLIFSSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPY--GKNCKPSEANPYNRGCSGIYNRCRT

A0A6J1GXB3 protein RALF-like 321.8e-1758.42Show/hide
Query:  LLYLLIFSSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCN-KGEGKPYGK--NCKPSEANPYNRGCSGIYNRCR
        LL+LL+     +V   SS   CNGSIAEC  E+E LMESEISRRFLAQ  KYIS   L KD   C+  G G+PY K  +C P  ANPYNRGCS IY RCR
Subjt:  LLYLLIFSSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCN-KGEGKPYGK--NCKPSEANPYNRGCSGIYNRCR

Query:  T
        +
Subjt:  T

SwissProt top hitse value%identityAlignment
Q2HIM9 Protein RALF-like 318.8e-0643.08Show/hide
Query:  EEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANPYNRGCSGIYNRC
        E+E LM +EISRR L    +YI Y+ L +D   C K     Y  +C+  +AN Y+RGC  I  RC
Subjt:  EEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANPYNRGCSGIYNRC

Q8L9P8 Protein RALF-like 331.7e-0949.37Show/hide
Query:  CNGSIAEC---YEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANPYNRGCSGIYNRCR
        CNG+IAEC     EEE  M+SEI+RR LA   KYISY  L ++   C++  G  Y    + ++ANPY+RGCS I  RCR
Subjt:  CNGSIAEC---YEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANPYNRGCSGIYNRCR

Q9LK37 Protein RALF-like 241.6e-0741.96Show/hide
Query:  QSLRLV-LGLLYLLI-FSSTVVVAVDS------SMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANP
        +SL LV L LL L    S +V V + S      +M   NG I E  EE E +M SEISRR +    +YISY+ L +D   C K     Y   C+  +AN 
Subjt:  QSLRLV-LGLLYLLI-FSSTVVVAVDS------SMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANP

Query:  YNRGCSGIYNRC
        YNRGCS +  RC
Subjt:  YNRGCSGIYNRC

Q9MA62 Protein RALF-like 221.5e-1051.95Show/hide
Query:  CNGSIAECY-EEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANPYNRGCSGIYNRCR
        C GSIAEC  EEEEM  +S+ISRR LAQ  KYISY  + ++   C++  G  Y    + ++ANPY+RGCS I  RCR
Subjt:  CNGSIAECY-EEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANPYNRGCSGIYNRCR

Q9SRY3 Protein RALF-like 11.3e-0950Show/hide
Query:  CNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCK-PSEANPYNRGCSGIYNRCRT
        C+GSIAEC   EE  M+SEI+RR LA   KYISY  L ++   C++     Y  NC+  ++ANPY+RGCS I  RCR+
Subjt:  CNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCK-PSEANPYNRGCSGIYNRCRT

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 19.3e-1150Show/hide
Query:  CNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCK-PSEANPYNRGCSGIYNRCRT
        C+GSIAEC   EE  M+SEI+RR LA   KYISY  L ++   C++     Y  NC+  ++ANPY+RGCS I  RCR+
Subjt:  CNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCK-PSEANPYNRGCSGIYNRCRT

AT3G05490.1 ralf-like 221.1e-1151.95Show/hide
Query:  CNGSIAECY-EEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANPYNRGCSGIYNRCR
        C GSIAEC  EEEEM  +S+ISRR LAQ  KYISY  + ++   C++  G  Y    + ++ANPY+RGCS I  RCR
Subjt:  CNGSIAECY-EEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANPYNRGCSGIYNRCR

AT3G23805.1 ralf-like 241.1e-0841.96Show/hide
Query:  QSLRLV-LGLLYLLI-FSSTVVVAVDS------SMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANP
        +SL LV L LL L    S +V V + S      +M   NG I E  EE E +M SEISRR +    +YISY+ L +D   C K     Y   C+  +AN 
Subjt:  QSLRLV-LGLLYLLI-FSSTVVVAVDS------SMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANP

Query:  YNRGCSGIYNRC
        YNRGCS +  RC
Subjt:  YNRGCSGIYNRC

AT4G13950.1 ralf-like 316.3e-0743.08Show/hide
Query:  EEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANPYNRGCSGIYNRC
        E+E LM +EISRR L    +YI Y+ L +D   C K     Y  +C+  +AN Y+RGC  I  RC
Subjt:  EEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANPYNRGCSGIYNRC

AT4G15800.1 ralf-like 331.2e-1049.37Show/hide
Query:  CNGSIAEC---YEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANPYNRGCSGIYNRCR
        CNG+IAEC     EEE  M+SEI+RR LA   KYISY  L ++   C++  G  Y    + ++ANPY+RGCS I  RCR
Subjt:  CNGSIAEC---YEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANPYNRGCSGIYNRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGGAAGCTCAAGCCACCAAAGCCTCCGCCTCGTCCTCGGCCTTCTATATCTATTGATTTTTAGTAGCACCGTCGTTGTCGCCGTTGATAGCTCGATGAGACCGTG
CAACGGTTCGATAGCAGAGTGCTACGAAGAGGAAGAGATGCTAATGGAGTCGGAGATAAGTCGAAGGTTTCTCGCACAAAATCCGAAATACATATCGTATGATGTTCTGA
TTAAAGACAAAGCAACTTGTAATAAAGGTGAAGGCAAACCTTATGGTAAAAATTGTAAGCCTTCTGAAGCTAATCCTTATAATAGAGGATGCAGTGGAATATATAATCGA
TGTAGGACTTAG
mRNA sequenceShow/hide mRNA sequence
ATGAAAGGAAGCTCAAGCCACCAAAGCCTCCGCCTCGTCCTCGGCCTTCTATATCTATTGATTTTTAGTAGCACCGTCGTTGTCGCCGTTGATAGCTCGATGAGACCGTG
CAACGGTTCGATAGCAGAGTGCTACGAAGAGGAAGAGATGCTAATGGAGTCGGAGATAAGTCGAAGGTTTCTCGCACAAAATCCGAAATACATATCGTATGATGTTCTGA
TTAAAGACAAAGCAACTTGTAATAAAGGTGAAGGCAAACCTTATGGTAAAAATTGTAAGCCTTCTGAAGCTAATCCTTATAATAGAGGATGCAGTGGAATATATAATCGA
TGTAGGACTTAG
Protein sequenceShow/hide protein sequence
MKGSSSHQSLRLVLGLLYLLIFSSTVVVAVDSSMRPCNGSIAECYEEEEMLMESEISRRFLAQNPKYISYDVLIKDKATCNKGEGKPYGKNCKPSEANPYNRGCSGIYNR
CRT