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Lsi05G013670 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G013670
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionprotein RALF-like 32
Genome locationchr05:21548309..21548641
RNA-Seq ExpressionLsi05G013670
SyntenyLsi05G013670
Gene Ontology termsGO:0019722 - calcium-mediated signaling (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR008801 - Rapid ALkalinization Factor


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582127.1 Protein RALF-like 32, partial [Cucurbita argyrosperma subsp. sororia]1.2e-4487.85Show/hide
Query:  QSCFLLLLFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKI
        +SCF  LLFLLL+Q LCLVRASS HSCNGSIAECG EEE LMESEISRRFL QQKKYISIGALKKDHPACDGGG GQPYTKSGSC+PP  NPYNRGCSKI
Subjt:  QSCFLLLLFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKI

Query:  YRCRSDD
        YRCRSDD
Subjt:  YRCRSDD

KAG7018527.1 Protein RALF-like 32, partial [Cucurbita argyrosperma subsp. argyrosperma]2.6e-4486.92Show/hide
Query:  QSCFLLLLFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKI
        +SCF  LLFLLL+Q LCLVRASS HSCNGSIAECG EEE LMESEISRRFL QQKKYISIGALKKDHPACDGGG GQPYT+SGSC+PP  NPYNRGCSKI
Subjt:  QSCFLLLLFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKI

Query:  YRCRSDD
        YRCRSDD
Subjt:  YRCRSDD

XP_022956250.1 protein RALF-like 32 [Cucurbita moschata]2.6e-4486.92Show/hide
Query:  QSCFLLLLFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKI
        +SCF  LLFLLL+Q LCLVRASS HSCNGSIAECG E+E LMESEISRRFL QQKKYISIGALKKDHPACDGGG GQPYTKSGSC+PP  NPYNRGCSKI
Subjt:  QSCFLLLLFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKI

Query:  YRCRSDD
        YRCRSDD
Subjt:  YRCRSDD

XP_023528073.1 protein RALF-like 32 [Cucurbita pepo subsp. pepo]5.3e-4587.85Show/hide
Query:  QSCFLLLLFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKI
        +SCF  LLFLLL+Q LCLVRASS HSCNGSIAECG EEE LMESEISRRFLEQQKKYISIGALKKDHPACDGGG GQPYT+SGSC+PP  NPYNRGCSKI
Subjt:  QSCFLLLLFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKI

Query:  YRCRSDD
        YRCRSDD
Subjt:  YRCRSDD

XP_038900965.1 protein RALF-like 32 [Benincasa hispida]3.1e-4589.91Show/hide
Query:  LQSCFLLL-LFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCS
        LQSCFLLL LFLLLLQ LCLVRA S HSCNGSIAECGSEEE+LMESEISRRFLEQ KKYISIGALKKDHPACDG G GQPYTKSGSC PP TNPY RGCS
Subjt:  LQSCFLLL-LFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCS

Query:  KIYRCRSDD
        KIYRCRSDD
Subjt:  KIYRCRSDD

TrEMBL top hitse value%identityAlignment
A0A0A0L624 Uncharacterized protein8.8e-3077.23Show/hide
Query:  MPLQSCFLLLLFL-LLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKK-YISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNR
        M LQ+CFLLLLFL  LLQ LCLVR SS HSCNGSIAEC +EEE+LMESEI+RRFL QQKK YIS   LKKD PACD G SGQPYTKSGSC P Q NPYN 
Subjt:  MPLQSCFLLLLFL-LLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKK-YISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNR

Query:  G
        G
Subjt:  G

A0A0A0L9A8 Uncharacterized protein2.4e-4382.14Show/hide
Query:  MPLQSCFLLL--LFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNR
        M LQ+CFLLL  LFL L Q LCLVRASS HSCNGSIA C +EEE+LMESEI+RRFLEQQKKYISIGALKKDHPACDG   GQPYT+SGSC+PP  NPYNR
Subjt:  MPLQSCFLLL--LFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNR

Query:  GCSKIYRCRSDD
        GCSKIYRCRSDD
Subjt:  GCSKIYRCRSDD

A0A5A7VKE5 Protein RALF-like 324.1e-4381.58Show/hide
Query:  MPLQSCF----LLLLFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPY
        M LQ CF    LLLLFL LLQ LCLVRASS HSCNGSIAECGSE+E+LMESEISRRFL QQKKYISIGALKKDHPACDG   G+PYTKSGSC+PP  NPY
Subjt:  MPLQSCF----LLLLFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPY

Query:  NRGCSKIYRCRSDD
        +RGC KIYRCRSDD
Subjt:  NRGCSKIYRCRSDD

A0A6J1C9Y4 protein RALF-like 322.1e-3980.73Show/hide
Query:  PLQSCFLLLLFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCS
        P Q  FLLLLF  LLQ LCL+RAS A  CNGSIAEC +E+E+LMESEISRRFLEQQKKYISIGALKKD PACDG G GQPYTKSGSC PP +NPY+RGCS
Subjt:  PLQSCFLLLLFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCS

Query:  KIYRCRSDD
        KIYRCRSDD
Subjt:  KIYRCRSDD

A0A6J1GXB3 protein RALF-like 321.3e-4486.92Show/hide
Query:  QSCFLLLLFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKI
        +SCF  LLFLLL+Q LCLVRASS HSCNGSIAECG E+E LMESEISRRFL QQKKYISIGALKKDHPACDGGG GQPYTKSGSC+PP  NPYNRGCSKI
Subjt:  QSCFLLLLFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKI

Query:  YRCRSDD
        YRCRSDD
Subjt:  YRCRSDD

SwissProt top hitse value%identityAlignment
O23262 Protein RALF-like 321.7e-1747.66Show/hide
Query:  LLLLFLLLLQHLCLVRASSAHSCNGSIAECGS-----EEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSK
        + + FL LL      +ASS+  CNGS+AEC S     E  ++MES  S+R  E+Q   +S GAL+++ PACDGG  G+ Y  S  C PP +NPY+RGCSK
Subjt:  LLLLFLLLLQHLCLVRASSAHSCNGSIAECGS-----EEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSK

Query:  IYRCRSD
         YRC  D
Subjt:  IYRCRSD

Q8L9P8 Protein RALF-like 333.4e-1048.15Show/hide
Query:  CNGSIAECG---SEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKIYRCR
        CNG+IAEC    +EEE  M+SEI+RR L    KYIS GAL+++   C   G+     + G+    Q NPY+RGCS I RCR
Subjt:  CNGSIAECG---SEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKIYRCR

Q945T0 Rapid alkalinization factor6.8e-1148.84Show/hide
Query:  ASSAHSCNGSIAEC-GSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKIYRCRS
        A S   C GSI EC   EEE  ++SE +RR L   KKYIS GAL+K+   C   G+     K G+    Q NPY+RGCS I RCRS
Subjt:  ASSAHSCNGSIAEC-GSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKIYRCRS

Q9MA62 Protein RALF-like 226.8e-1147.31Show/hide
Query:  LCLVRASSA---HSCNGSIAEC-GSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKIYRCR
        L  VRA S+     C GSIAEC   EEE+  +S+ISRR L  QKKYIS GA++++   C   G+     + G+    Q NPY+RGCS I RCR
Subjt:  LCLVRASSA---HSCNGSIAEC-GSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKIYRCR

Q9SRY3 Protein RALF-like 12.0e-1049.37Show/hide
Query:  CNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKIYRCRS
        C+GSIAEC   EE  M+SEI+RR L    KYIS  +LK++   C   G+     ++G+    Q NPY+RGCSKI RCRS
Subjt:  CNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKIYRCRS

Arabidopsis top hitse value%identityAlignment
AT1G02900.1 rapid alkalinization factor 11.4e-1149.37Show/hide
Query:  CNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKIYRCRS
        C+GSIAEC   EE  M+SEI+RR L    KYIS  +LK++   C   G+     ++G+    Q NPY+RGCSKI RCRS
Subjt:  CNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKIYRCRS

AT3G05490.1 ralf-like 224.8e-1247.31Show/hide
Query:  LCLVRASSA---HSCNGSIAEC-GSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKIYRCR
        L  VRA S+     C GSIAEC   EEE+  +S+ISRR L  QKKYIS GA++++   C   G+     + G+    Q NPY+RGCS I RCR
Subjt:  LCLVRASSA---HSCNGSIAEC-GSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKIYRCR

AT3G23805.1 ralf-like 241.6e-0740Show/hide
Query:  QSCFLLLLFLLLLQ-HLCLVRASSAHSCNGSI-------AECGSEE-EILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTN
        +S  L+ L LL LQ HL +       S NG I          G EE E +M SEISRR +  +K+YIS   L++D   C   G+     +SG     Q N
Subjt:  QSCFLLLLFLLLLQ-HLCLVRASSAHSCNGSI-------AECGSEE-EILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTN

Query:  PYNRGCSKIYRCRSD
         YNRGCS I RC  D
Subjt:  PYNRGCSKIYRCRSD

AT4G14010.1 ralf-like 321.2e-1847.66Show/hide
Query:  LLLLFLLLLQHLCLVRASSAHSCNGSIAECGS-----EEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSK
        + + FL LL      +ASS+  CNGS+AEC S     E  ++MES  S+R  E+Q   +S GAL+++ PACDGG  G+ Y  S  C PP +NPY+RGCSK
Subjt:  LLLLFLLLLQHLCLVRASSAHSCNGSIAECGS-----EEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSK

Query:  IYRCRSD
         YRC  D
Subjt:  IYRCRSD

AT4G15800.1 ralf-like 332.4e-1148.15Show/hide
Query:  CNGSIAECG---SEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKIYRCR
        CNG+IAEC    +EEE  M+SEI+RR L    KYIS GAL+++   C   G+     + G+    Q NPY+RGCS I RCR
Subjt:  CNGSIAECG---SEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKIYRCR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGCCTTTACAATCTTGCTTTCTTCTCCTTCTCTTTCTCCTCCTTCTCCAACATCTTTGTCTCGTTCGAGCTTCATCGGCGCATTCTTGCAATGGCTCCATAGCCGAGTG
TGGTAGCGAGGAAGAGATACTGATGGAGTCGGAGATAAGTCGAAGGTTTCTCGAACAACAAAAGAAATACATCTCCATTGGAGCTTTGAAGAAGGATCATCCAGCTTGCG
ATGGTGGTGGCAGCGGCCAACCTTACACCAAAAGCGGAAGCTGCTCTCCGCCACAAACTAATCCTTACAATCGAGGCTGCTCTAAGATATATCGTTGTAGGTCGGATGAT
TGA
mRNA sequenceShow/hide mRNA sequence
ATGCCTTTACAATCTTGCTTTCTTCTCCTTCTCTTTCTCCTCCTTCTCCAACATCTTTGTCTCGTTCGAGCTTCATCGGCGCATTCTTGCAATGGCTCCATAGCCGAGTG
TGGTAGCGAGGAAGAGATACTGATGGAGTCGGAGATAAGTCGAAGGTTTCTCGAACAACAAAAGAAATACATCTCCATTGGAGCTTTGAAGAAGGATCATCCAGCTTGCG
ATGGTGGTGGCAGCGGCCAACCTTACACCAAAAGCGGAAGCTGCTCTCCGCCACAAACTAATCCTTACAATCGAGGCTGCTCTAAGATATATCGTTGTAGGTCGGATGAT
TGA
Protein sequenceShow/hide protein sequence
MPLQSCFLLLLFLLLLQHLCLVRASSAHSCNGSIAECGSEEEILMESEISRRFLEQQKKYISIGALKKDHPACDGGGSGQPYTKSGSCSPPQTNPYNRGCSKIYRCRSDD