CuGenDBv2

Gene ID	Lsi05G013720
Organism	Lagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Description	50S ribosomal protein L18
Genome location	chr05:21588602..21592642
RNA-Seq Expression	Lsi05G013720
Synteny	Lsi05G013720
Gene Ontology terms	GO:0006412 - translation (biological process) GO:0005840 - ribosome (cellular component) GO:0003735 - structural constituent of ribosome (molecular function) GO:0008097 - 5S rRNA binding (molecular function)
InterPro domains	IPR004389 - Ribosomal protein L18, bacterial-type IPR005484 - Ribosomal protein L18

Homology

Show/hide homology

GenBank top hits

e value

%identity

Alignment

KAG6597602.1 50S ribosomal protein L18, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia]

4.2e-70

71.3

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Query:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD
        M SA APLSFLG+S L VSYS NLR  PHL+FP+TTSSSGRHSLV+EAKATTRREDRAARHSRIRKK                                 
Subjt:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD

Query:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
                      +GTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDY++GPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
Subjt:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG

Query:  RVEALADAAREHGLQF
        RVEALADAAREHGL F
Subjt:  RVEALADAAREHGLQF

XP_004147640.1 50S ribosomal protein L18, chloroplastic [Cucumis sativus]

1.5e-72

72.69

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Query:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD
        MAS  AP SFL TSFL+VSYS N+ NRPHLHFP TTSSSGRHSLVVEAKATTRREDR ARHSRIRKK                                 
Subjt:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD

Query:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
                      +GTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKK+GEAIAKSCLEKGITKVAFDRGGYPYHG
Subjt:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG

Query:  RVEALADAAREHGLQF
        RVEALADAAREHGLQF
Subjt:  RVEALADAAREHGLQF

XP_008439021.1 PREDICTED: 50S ribosomal protein L18, chloroplastic [Cucumis melo]

5.6e-75

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Query:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD
        MAS  AP SFLGTSFLSVSYS N+ NRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKK                                 
Subjt:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD

Query:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
                      +GTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
Subjt:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG

Query:  RVEALADAAREHGLQF
        RVEALADAAREHGLQF
Subjt:  RVEALADAAREHGLQF

XP_023538937.1 50S ribosomal protein L18, chloroplastic [Cucurbita pepo subsp. pepo]

8.4e-71

71.76

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Query:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD
        M+SA APLSFLGTS L VSYS NLR  PHL+FP+TTSSSGRHSLV+EAKATTRREDRAARHSRIRKK                                 
Subjt:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD

Query:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
                      +GTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDY++GPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
Subjt:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG

Query:  RVEALADAAREHGLQF
        RVEALADAAREHGL F
Subjt:  RVEALADAAREHGLQF

XP_038885362.1 50S ribosomal protein L18, chloroplastic-like [Benincasa hispida]

3.0e-76

75.93

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Query:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD
        MASA APLSFLGTSFLSVSYS NLRNRPHLHFPATTSSSGRHSLVVEA+ATTRREDR+ARHSRIRKK                                 
Subjt:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD

Query:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
                      +GTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
Subjt:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG

Query:  RVEALADAAREHGLQF
        RVEALADAAREHGLQF
Subjt:  RVEALADAAREHGLQF

TrEMBL top hits

e value

%identity

Alignment

A0A0A0L9A4 Uncharacterized protein

7.4e-73

72.69

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Query:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD
        MAS  AP SFL TSFL+VSYS N+ NRPHLHFP TTSSSGRHSLVVEAKATTRREDR ARHSRIRKK                                 
Subjt:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD

Query:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
                      +GTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKK+GEAIAKSCLEKGITKVAFDRGGYPYHG
Subjt:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG

Query:  RVEALADAAREHGLQF
        RVEALADAAREHGLQF
Subjt:  RVEALADAAREHGLQF

A0A1S3AXQ6 50S ribosomal protein L18, chloroplastic

2.7e-75

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Query:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD
        MAS  AP SFLGTSFLSVSYS N+ NRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKK                                 
Subjt:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD

Query:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
                      +GTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
Subjt:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG

Query:  RVEALADAAREHGLQF
        RVEALADAAREHGLQF
Subjt:  RVEALADAAREHGLQF

A0A5A7UA63 50S ribosomal protein L18

2.7e-75

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Query:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD
        MAS  AP SFLGTSFLSVSYS N+ NRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKK                                 
Subjt:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD

Query:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
                      +GTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
Subjt:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG

Query:  RVEALADAAREHGLQF
        RVEALADAAREHGLQF
Subjt:  RVEALADAAREHGLQF

A0A6J1F5G8 50S ribosomal protein L18, chloroplastic

1.7e-69

71.03

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Query:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD
        M+SA APLSFLG+S L VSYS NLR  PHL+FP+T SSSGRHSLV+EAKATTRREDRAARHSRIRKK                                 
Subjt:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD

Query:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
                      +GTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDY++GPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
Subjt:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG

Query:  RVEALADAAREHGL
        RVEALADAAREHGL
Subjt:  RVEALADAAREHGL

A0A6J1IAC8 50S ribosomal protein L18, chloroplastic

8.5e-69

69.91

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Query:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD
        M+SA A +SFLG+S L VSYS NLR  PHL+FP++TSSSGRHSLV+EAKATTRREDRAARHSRIRKK                                 
Subjt:  MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASD

Query:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
                      +GTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDY++GPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
Subjt:  DLKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG

Query:  RVEALADAAREHGLQF
        RVEALADAAREHGL F
Subjt:  RVEALADAAREHGLQF

SwissProt top hits

e value

%identity

Alignment

P09415 50S ribosomal protein L18

1.7e-29

59.35

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Query:  LKKWDRVALCKERQ--------GTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDR
        + K DR A+ K+R         GTTERPRLSVFRSNKH+Y Q+IDD+K  T+ + ST+ K    GLD  +   IE AKKVGE +AK  LEKGI +V FDR
Subjt:  LKKWDRVALCKERQ--------GTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDR

Query:  GGYPYHGRVEALADAAREHGLQF
        GGY YHGRV+ALADAARE GL+F
Subjt:  GGYPYHGRVEALADAAREHGLQF

P82195 50S ribosomal protein L18, chloroplastic

5.2e-47

53.95

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Query:  SAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSL-VVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASDD
        +AA  LSF  ++  S S S    +   L  P    +    +L +++AKA TRREDR ARH RIRKK                                  
Subjt:  SAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSL-VVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASDD

Query:  LKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHGR
                     +GT ERPRL VFRSNKHLYVQVIDD+KMHTLAA STMQK+ISE +DYSAGPT+EVA+K+GE IAKSCLEKGITKVAFDRGGYPYHGR
Subjt:  LKKWDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHGR

Query:  VEALADAAREHGLQF
        V+ALADAAREHGL F
Subjt:  VEALADAAREHGLQF

Q5L3S3 50S ribosomal protein L18

1.7e-29

59.35

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Query:  LKKWDRVALCKERQ--------GTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDR
        + K DR A+ K+R         GT ERPRLSVFRSNKH+Y Q+IDD+K  T+ + ST+ K    GLD  +   IE AKKVGE +AK  LEKGI KV FDR
Subjt:  LKKWDRVALCKERQ--------GTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDR

Query:  GGYPYHGRVEALADAAREHGLQF
        GGY YHGRV+ALADAARE GL+F
Subjt:  GGYPYHGRVEALADAAREHGLQF

Q8SAY0 50S ribosomal protein L18, chloroplastic

6.1e-40

51.31

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Query:  PHLHFPATTSSSGRHSLVVEA--KATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASDDLKKWDRVALCKERQGTTERPRLSV
        P +  P+ + +  R SLVV A  K +T + DR ARH R+RKK S                                              GTTERPRLSV
Subjt:  PHLHFPATTSSSGRHSLVVEA--KATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASDDLKKWDRVALCKERQGTTERPRLSV

Query:  FRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        FRSNKHLY QVIDD+K  TL + STM KS+S+ L+YSAGPT+EVA+K+GE IAKSCLEKGITKV FDRGG+ YHGR++ALADAARE+GL F
Subjt:  FRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

Q9SX68 50S ribosomal protein L18, chloroplastic

6.1e-48

56.5

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Query:  SVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASDDLKKWDRVALCKERQG
        S    + L++R     P ++SS    S+VVEAK  T  EDR ARHSRIRKK +                                              G
Subjt:  SVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASDDLKKWDRVALCKERQG

Query:  TTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        TTERPRL VFRSNKHLYVQVIDD+KMHTLA+ ST QK ISE  DY++GPTIEVAKKVGE IAKSCLEKGITKVAFDRGGYPYHGR+EALA AAREHGLQF
Subjt:  TTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

Arabidopsis top hits

e value

%identity

Alignment

AT1G14205.1 Ribosomal L18p/L5e family protein

2.6e-09

29.05

Show/hide

Query:  APLSFLGTSFLSVSYSHNLRNRPHLHFP-ATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASDDLKK
        A L+ L T    VS     R +P+  FP   T+ S     V+EA+  TR E    R+ R RKK +                                   
Subjt:  APLSFLGTSFLSVSYSHNLRNRPHLHFP-ATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASDDLKK

Query:  WDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKV-AFDRGGYPYHGRVE
                   GT  +PRLSVF S+K LY  ++DD     L   ST+QKSI      +    IE AK+VGE + K+ ++  I ++ ++DR G     R++
Subjt:  WDRVALCKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKV-AFDRGGYPYHGRVE

Query:  ALADAAREHG
        A   A  +HG
Subjt:  ALADAAREHG

AT1G48350.1 Ribosomal L18p/L5e family protein

4.3e-49

56.5

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Query:  SVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASDDLKKWDRVALCKERQG
        S    + L++R     P ++SS    S+VVEAK  T  EDR ARHSRIRKK +                                              G
Subjt:  SVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASDDLKKWDRVALCKERQG

Query:  TTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF
        TTERPRL VFRSNKHLYVQVIDD+KMHTLA+ ST QK ISE  DY++GPTIEVAKKVGE IAKSCLEKGITKVAFDRGGYPYHGR+EALA AAREHGLQF
Subjt:  TTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

AT3G17626.1 structural constituent of ribosome

2.6e-09

75.68

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Query:  GPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG
        G TIE+AKKVGE I KSC+E GITKVAFDR  Y YHG
Subjt:  GPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHG

Sequences

Show/hide sequences

CDS sequence

Show/hide CDS sequence

ATGGCTTCAGCCGCTGCTCCTTTATCGTTCCTCGGCACTTCCTTTCTAAGCGTCTCTTACTCACACAACCTTCGCAACCGTCCTCACCTTCATTTTCCGGCAACCACTTC
AAGTTCCGGCCGACACTCTCTTGTTGTTGAAGCCAAGGCTACGACTAGACGAGAGGACCGTGCAGCTCGCCATTCTCGCATCAGGAAGAAGTCTTCTCGGCATCAAATGA
CAGTCATCAAAGCTGTAATCGGAACTCCTTTCGAGATAGGATCTGCTAAGATTTACATTTCAGTTCTTTGGGCCTCTGATGACTTGAAAAAATGGGATAGGGTAGCATTA
TGCAAAGAGCGACAGGGAACGACAGAGAGGCCAAGGTTGTCTGTGTTCCGTTCGAACAAGCATTTGTATGTACAGGTTATCGATGACTCCAAGATGCATACGCTTGCTGC
AGTTTCCACAATGCAGAAATCAATCTCTGAGGGGTTAGACTACAGTGCTGGCCCTACCATTGAAGTGGCAAAGAAAGTGGGAGAAGCGATTGCAAAATCTTGTCTGGAGA
AAGGAATAACAAAAGTTGCATTCGACCGTGGTGGATATCCATACCATGGTCGTGTAGAAGCACTTGCCGATGCGGCTCGTGAACATGGCCTTCAATTCTGA

mRNA sequence

Show/hide mRNA sequence

TGGATTTTCCATCATCGTCTGCCAATCCCGCTTGAAATTTCATGTAGAAAAACCGCTGCACAAGTGGATAAGGCAAGGCAATCCCAACTAAACCAATAACCCCAAGAAGA
AGAAGAAGAAGAAGAAGAGAACCAGGGCAACAATGGCTTCAGCCGCTGCTCCTTTATCGTTCCTCGGCACTTCCTTTCTAAGCGTCTCTTACTCACACAACCTTCGCAAC
CGTCCTCACCTTCATTTTCCGGCAACCACTTCAAGTTCCGGCCGACACTCTCTTGTTGTTGAAGCCAAGGCTACGACTAGACGAGAGGACCGTGCAGCTCGCCATTCTCG
CATCAGGAAGAAGTCTTCTCGGCATCAAATGACAGTCATCAAAGCTGTAATCGGAACTCCTTTCGAGATAGGATCTGCTAAGATTTACATTTCAGTTCTTTGGGCCTCTG
ATGACTTGAAAAAATGGGATAGGGTAGCATTATGCAAAGAGCGACAGGGAACGACAGAGAGGCCAAGGTTGTCTGTGTTCCGTTCGAACAAGCATTTGTATGTACAGGTT
ATCGATGACTCCAAGATGCATACGCTTGCTGCAGTTTCCACAATGCAGAAATCAATCTCTGAGGGGTTAGACTACAGTGCTGGCCCTACCATTGAAGTGGCAAAGAAAGT
GGGAGAAGCGATTGCAAAATCTTGTCTGGAGAAAGGAATAACAAAAGTTGCATTCGACCGTGGTGGATATCCATACCATGGTCGTGTAGAAGCACTTGCCGATGCGGCTC
GTGAACATGGCCTTCAATTCTGAAAGTCCCTGTGTGTGTTTTTTTTCCATATCTTCTAGCTTGGTATGCTGTAACAGTGCCATCAGATGGGCTTATTTTTCTGTTGATTA
GACGAGAGTTATAGTGGTTTGACCTGAAATTAAGAGGGAAAGTATTTGTTGATTCATATTTTCTTTGGAAATCAATGTATTTAGGCCTTAAATTAAGGTCAGTGGTTTTA
AATATTCAGAAAGTCATTTTAAATAGGTTCTCAGATGCTACAGGAAGATGAAGCAGACTTCAAAGAAAATTTTGTCTCACAAATATGAAAAAGAAGATTTGTATTTTTAT
AACATGTAAATGAAGGTATAAATGTTTAACTATTTGATGTTAGGAAATTGGACATCTGATTATTAAACAATATGTGAGGTGGAGGAATTGAAGCAGGGCTCATTTTTATA
ACCT

Protein sequence

Show/hide protein sequence

MASAAAPLSFLGTSFLSVSYSHNLRNRPHLHFPATTSSSGRHSLVVEAKATTRREDRAARHSRIRKKSSRHQMTVIKAVIGTPFEIGSAKIYISVLWASDDLKKWDRVAL
CKERQGTTERPRLSVFRSNKHLYVQVIDDSKMHTLAAVSTMQKSISEGLDYSAGPTIEVAKKVGEAIAKSCLEKGITKVAFDRGGYPYHGRVEALADAAREHGLQF

Lsi05G013720 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome