; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G013780 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G013780
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionchromatin structure-remodeling complex protein BSH
Genome locationchr05:21689173..21694009
RNA-Seq ExpressionLsi05G013780
SyntenyLsi05G013780
Gene Ontology termsGO:0006338 - chromatin remodeling (biological process)
GO:0006357 - regulation of transcription by RNA polymerase II (biological process)
GO:0000228 - nuclear chromosome (cellular component)
GO:0070603 - SWI/SNF superfamily-type complex (cellular component)
GO:0003712 - transcription coregulator activity (molecular function)
InterPro domainsIPR006939 - SNF5/SMARCB1/INI1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
XP_004147636.1 chromatin structure-remodeling complex protein BSH [Cucumis sativus]1.3e-10586.25Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IK                DLNNYESDPEEFSRTLCKDLGI+DPEVG             IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
Subjt:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_008439008.1 PREDICTED: chromatin structure-remodeling complex protein BSH isoform X1 [Cucumis melo]6.7e-10585.83Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IK                DLNNYESDPEEFSRTLCKDLGI+DPEVG             IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
Subjt:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_022138105.1 chromatin structure-remodeling complex protein BSH isoform X1 [Momordica charantia]1.5e-10183.33Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF+TQIAQSIQSQLTEFRS E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IK                DLNNYESDPEEFSRTLCKDLGIEDPEVG             IA+QNVASARESRMSKKGRRGFEHVP SK GGASVDLVKLF
Subjt:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        G RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEERTAR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_023538812.1 chromatin structure-remodeling complex protein BSH [Cucurbita pepo subsp. pepo]1.2e-9881.25Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MK+SAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY GEKII 
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IK                DLNNYESDPEEFSRT CKDLGIEDPEVG             IAVQNVASARESR+SKKGRRGFEHV  SKTGGASVDL+KLF
Subjt:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

XP_038898737.1 chromatin structure-remodeling complex protein BSH [Benincasa hispida]1.8e-10585.83Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVV+FAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY+GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IK                DLNNYESDPEEFSRT CKDLGIEDPEVG             IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
Subjt:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

TrEMBL top hitse value%identityAlignment
A0A0A0L868 Uncharacterized protein6.5e-10686.25Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IK                DLNNYESDPEEFSRTLCKDLGI+DPEVG             IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
Subjt:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A1S3AXP6 chromatin structure-remodeling complex protein BSH isoform X13.2e-10585.83Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IK                DLNNYESDPEEFSRTLCKDLGI+DPEVG             IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
Subjt:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A5A7UEL5 Chromatin structure-remodeling complex protein BSH isoform X13.2e-10585.83Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IK                DLNNYESDPEEFSRTLCKDLGI+DPEVG             IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
Subjt:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A6J1C8H9 chromatin structure-remodeling complex protein BSH isoform X17.4e-10283.33Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MKASAS HSK PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAF+TQIAQSIQSQLTEFRS E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IK                DLNNYESDPEEFSRTLCKDLGIEDPEVG             IA+QNVASARESRMSKKGRRGFEHVP SK GGASVDLVKLF
Subjt:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        G RSSVVRKRKDWD+YEPIVDLLSNEEVDALEAKEERTAR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

A0A6J1FBE7 chromatin structure-remodeling complex protein BSH1.3e-9880.83Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MK+SAS +SK+PFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNP+DPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRS E QDMY GEKII 
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IK                DLNNYESDPEEFSRT CKDLGIEDPEVG             IA+QNVASARESR+SKKGRRGFEHV  SKTGGASVDL+KLF
Subjt:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        GHRSS VRKRKDWDIYEPIVDLLSNEEVDALEAKEER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

SwissProt top hitse value%identityAlignment
P93045 Chromatin structure-remodeling complex protein BSH4.0e-8467.5Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTVKDLKLP AF+TQIAQSIQSQL++FR+ E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IK                DLNN+ESDPEEF+RTLCKDLG+EDPEVG             IA+Q+VASARESR+SKKGRRG +H   SK  G S+DL+KLF
Subjt:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
          +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

Q5BIN2 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 17.6e-1126.13Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIK----
        H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +F++    DL L P  F+  IA +I+ Q+  + +    +  + +++I IK    
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIK----

Query:  ------------DLNNYESDPEEFSRTLCKDLGIEDPEVGIAVQNVASARESRMS-KKGRRGFEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEP
                    D++  E+ PE+F+  LC +LG+     G  V  +A +   ++S  +    F   P+      +V++          +R   D D + P
Subjt:  ------------DLNNYESDPEEFSRTLCKDLGIEDPEVGIAVQNVASARESRMS-KKGRRGFEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEP

Query:  IVDLLSNEEVDALEAKEERTAR
        +++ L++ E++     ++R  R
Subjt:  IVDLLSNEEVDALEAKEERTAR

Q5U379 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 1-A5.3e-1227.48Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIK----
        H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P  F+  IA +I+ Q+  + +    D    +++I IK    
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIK----

Query:  ------------DLNNYESDPEEFSRTLCKDLGIEDPEVGIAVQNVASARESRMSKKGRR-GFEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEP
                    D++  E+ PE+F+  LC +LG+     G  V  +A +   ++S   R   F   P+      +V++          +R   D D + P
Subjt:  ------------DLNNYESDPEEFSRTLCKDLGIEDPEVGIAVQNVASARESRMSKKGRR-GFEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEP

Query:  IVDLLSNEEVDALEAKEERTAR
        +++ L++ E++     ++R  R
Subjt:  IVDLLSNEEVDALEAKEERTAR

Q6DFM1 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 16.9e-1227.03Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIK----
        H  A        +E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P AF+  IA +I+ Q+  + +    +  + +++I IK    
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIK----

Query:  ------------DLNNYESDPEEFSRTLCKDLGIEDPEVGIAVQNVASARESRMS-KKGRRGFEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEP
                    D++  E+ PE+F+  LC +LG+     G  V  +A +   ++S  +    F   P+      +V++          +R   D D + P
Subjt:  ------------DLNNYESDPEEFSRTLCKDLGIEDPEVGIAVQNVASARESRMS-KKGRRGFEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEP

Query:  IVDLLSNEEVDALEAKEERTAR
        +++ L++ E++     ++R  R
Subjt:  IVDLLSNEEVDALEAKEERTAR

Q6GQ82 SWI/SNF-related matrix-associated actin-dependent regulator of chromatin subfamily B member 11.2e-1127.03Show/hide
Query:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIK----
        H  A         E LVPIRLD+EIDGQ+ +DAFTWN ++      +FA+    DL L P AF+  IA +I+ Q+  + +    +  + +++I IK    
Subjt:  HSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPP-AFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIK----

Query:  ------------DLNNYESDPEEFSRTLCKDLGIEDPEVGIAVQNVASARESRMS-KKGRRGFEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEP
                    D++  E+ PE+F+  LC +LG+     G  V  +A +   ++S  +    F   P+      +V++          +R   D D + P
Subjt:  ------------DLNNYESDPEEFSRTLCKDLGIEDPEVGIAVQNVASARESRMS-KKGRRGFEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEP

Query:  IVDLLSNEEVDALEAKEERTAR
        +++ L++ E++     ++R  R
Subjt:  IVDLLSNEEVDALEAKEERTAR

Arabidopsis top hitse value%identityAlignment
AT3G17590.1 transcription regulatory protein SNF5, putative (BSH)2.8e-8567.5Show/hide
Query:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP
        MK   S   K P KFR+PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTVKDLKLP AF+TQIAQSIQSQL++FR+ E QDMY GEKIIP
Subjt:  MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIP

Query:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF
        IK                DLNN+ESDPEEF+RTLCKDLG+EDPEVG             IA+Q+VASARESR+SKKGRRG +H   SK  G S+DL+KLF
Subjt:  IK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLF

Query:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
          +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  GHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR

AT3G17590.2 transcription regulatory protein SNF5, putative (BSH)4.1e-8467.36Show/hide
Query:  MKASASPHSKAPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKI
        MK   S   K P KFRI  PTAENLVPIRLDI+ +GQR+KDAFTWNPSDPD+EVV+FAKRTVKDLKLP AF+TQIAQSIQSQL++FR+ E QDMY GEKI
Subjt:  MKASASPHSKAPFKFRI--PTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKI

Query:  IPIK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVK
        IPIK                DLNN+ESDPEEF+RTLCKDLG+EDPEVG             IA+Q+VASARESR+SKKGRRG +H   SK  G S+DL+K
Subjt:  IPIK----------------DLNNYESDPEEFSRTLCKDLGIEDPEVG-------------IAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVK

Query:  LFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR
        LF  +SSVVRKRKD D+YEP+VDLL++EEVDALEA+EER AR
Subjt:  LFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAAGCTTCGGCCTCACCTCACTCAAAAGCTCCTTTCAAGTTCAGGATTCCGACGGCGGAGAATCTTGTGCCAATTCGTTTGGACATTGAAATCGACGGCCAGAGGTT
CAAAGATGCCTTCACTTGGAACCCTTCTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAGCTTCCTCCGGCATTTATAACACAAATTG
CACAATCCATTCAATCACAACTTACAGAATTTCGATCCCTTGAAAGTCAAGATATGTATGCTGGTGAAAAGATTATTCCAATCAAGGACTTGAACAACTATGAGAGTGAC
CCTGAAGAGTTCTCCAGGACATTATGCAAAGATTTGGGTATTGAAGACCCTGAAGTTGGAATAGCAGTACAGAATGTTGCTTCAGCAAGAGAAAGCAGAATGAGCAAGAA
GGGCCGCCGAGGGTTCGAGCATGTTCCAGTAAGTAAAACTGGAGGTGCTTCGGTGGACTTGGTGAAGTTATTTGGTCATAGATCAAGTGTTGTTCGGAAAAGAAAGGACT
GGGACATTTACGAACCAATTGTCGATCTTCTATCCAACGAGGAAGTCGATGCCCTTGAAGCAAAAGAAGAGAGAACTGCTCGATAA
mRNA sequenceShow/hide mRNA sequence
CAATACTTACACTACATTTGCGACTGGCCCATTTATTTAACAGCATCCCTCGACGTCGATATTCACATATCTTTGAAAGCTCATATCCACATCAATGTTCTAATCGTGAA
CGATCCGAACTCAGAGAAGCGCAATGCAATCCCTCTGAAAAAGCTACAAAATTTGAAATACCCAAAGTATAAAGCACAAACAACTAGAGAGTCGATTACGGATTCACCAT
GAAAGCTTCGGCCTCACCTCACTCAAAAGCTCCTTTCAAGTTCAGGATTCCGACGGCGGAGAATCTTGTGCCAATTCGTTTGGACATTGAAATCGACGGCCAGAGGTTCA
AAGATGCCTTCACTTGGAACCCTTCTGATCCCGATTCAGAGGTGGTGGTCTTTGCAAAGAGGACGGTGAAAGATTTAAAGCTTCCTCCGGCATTTATAACACAAATTGCA
CAATCCATTCAATCACAACTTACAGAATTTCGATCCCTTGAAAGTCAAGATATGTATGCTGGTGAAAAGATTATTCCAATCAAGGACTTGAACAACTATGAGAGTGACCC
TGAAGAGTTCTCCAGGACATTATGCAAAGATTTGGGTATTGAAGACCCTGAAGTTGGAATAGCAGTACAGAATGTTGCTTCAGCAAGAGAAAGCAGAATGAGCAAGAAGG
GCCGCCGAGGGTTCGAGCATGTTCCAGTAAGTAAAACTGGAGGTGCTTCGGTGGACTTGGTGAAGTTATTTGGTCATAGATCAAGTGTTGTTCGGAAAAGAAAGGACTGG
GACATTTACGAACCAATTGTCGATCTTCTATCCAACGAGGAAGTCGATGCCCTTGAAGCAAAAGAAGAGAGAACTGCTCGATAATATATTCTCAGTTGCTGTTGTTGATC
ATATAGCTTCTATCGTCAAACAGCGTCAACTTTCCCAGTGGAGGTAAATTATTCGACACGGATAAAGTTATTAGGGAATTGTTCTTGCTGTTTGAACACATAATTAACAT
TCTTTAACTTCCTAAGTTAGAGGCTTTTGGAGCGATTCTTCATCGATTGTTCTTAATCCCCATCTAGCTGTTGAGTATATGAACTGAAGTTCTGATACTGAAGTTCATAT
GGTAGATATTTTGACAAAATTTTAGTGTAGTACTTGGCATGGCCTATGTAACTAGAAAGGGGTTAGTGAGCTCTGATAATCATATGAGTAGAACTTCTGATATGAGTTCT
CATTCTTATTTGTTGCTTTTGACAGCATACTCAGAACCATTAAAAAAGTTACTGAAAACTGATTAAGTGAATATATTCATATATGCCAAAAGTTCTTTGTTACAATCATT
TGGACAATTTCCATAATGGTCCATTTTTCTCTTTAAAAGTTGGAAAATGAGTTGTGGCAGTCTTTGATGATAACATCCCAAAAGAGGGTGCAATCTAGAATTAAAATGTT
TATGTATAATAAAAAG
Protein sequenceShow/hide protein sequence
MKASASPHSKAPFKFRIPTAENLVPIRLDIEIDGQRFKDAFTWNPSDPDSEVVVFAKRTVKDLKLPPAFITQIAQSIQSQLTEFRSLESQDMYAGEKIIPIKDLNNYESD
PEEFSRTLCKDLGIEDPEVGIAVQNVASARESRMSKKGRRGFEHVPVSKTGGASVDLVKLFGHRSSVVRKRKDWDIYEPIVDLLSNEEVDALEAKEERTAR