; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G013950 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G013950
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionHistone acetyltransferase
Genome locationchr05:21805769..21833805
RNA-Seq ExpressionLsi05G013950
SyntenyLsi05G013950
Gene Ontology termsGO:0004386 - helicase activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER28433.1 histone acetyltransferase [Striga asiatica]7.9e-0460.87Show/hide
Query:  IMSFDTSSDVKANTLPGNDPIAEVPKPLYKPEIPSDFNIFQKTDSP
        ++SFD SS+VKA T PGNDPIA+VPKPL  P  PS   ++ KTD+P
Subjt:  IMSFDTSSDVKANTLPGNDPIAEVPKPLYKPEIPSDFNIFQKTDSP
KAF7837658.1 DEAD-box ATP-dependent RNA helicase 46 [Senna tora]5.0e-0680Show/hide
Query:  NIMSFDTSSDVKANTLPGNDPIAEVPKPLYKPEIPSDFNI
        NI SFD SSDV+A TLPGNDPIAEVPKPL  P IPS FNI
Subjt:  NIMSFDTSSDVKANTLPGNDPIAEVPKPLYKPEIPSDFNI
TrEMBL top hitse value%identityAlignment
A0A5A7P6L0 Histone acetyltransferase3.8e-0460.87Show/hide
Query:  IMSFDTSSDVKANTLPGNDPIAEVPKPLYKPEIPSDFNIFQKTDSP
        ++SFD SS+VKA T PGNDPIA+VPKPL  P  PS   ++ KTD+P
Subjt:  IMSFDTSSDVKANTLPGNDPIAEVPKPLYKPEIPSDFNIFQKTDSP
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAAGAGAGAACATAGTTACCACTTGAGCATTCATTCACCCTACACACAAAATCTCATTTACCATGACGGCCTTCACACAGCAGTGAGACGCAAGTATCCCTTCTCTGA
TGGAAGCTCCACATTCACCGGAGTCGCCACCTTGTGCTTTGCAGCCTTCTGCAAAGACTCCAAAACCCTCACCACTTCCTCAACGTTCCTCCCAGTACTTGCTGGATATA
AGAAGCTCAGCTTCACCTTCTTGTCCGGACCGATGATGTGCAATGCCCGCGATGGCACTGCGCCACCCGATGAATCTTTCTCATCGGGATCGACCATGTTCAGTTCCTTG
ATGATCTCCCGCTTTGGATCGGCCAGTATTGGATATCCATCCAACACCAAGCGTGTCAAAGTAATGCACTTCAGCCAACACGACAAGTGGACAATTTTTGGCCTTGCTTC
GTTAATCCGATCAACGTATGAGAAAAAAGAAATAGAAATCCAGTTCCTTCTCATGATTAATCTGATACTGTGGGCCCTTTCACCTACTCCAAAGAATGATAATATTCATA
CCTATAATCACCAGCAGCAGGCTCTGAAGGAATTCAAACCCTGCATTTATAAGGTGGCCATGGGTGGGAGAAGCTTGAGTTTTGCATTGCCGAAGTCGCGTCTTTACTGT
GTCTACGGGAGTTGTAAGAACAGAGGAACAAGCACCTGCCACCATTCCTGCTGTGGCCTGAACCGTCACCATCTCCATGTGAGAAGGGGCATCACGAGTAGCAGATATAC
ATACAGTTTGAAATTAAAGCTGCTTTATAAACTGTTAAGTAGCAGAGAGGATCAAGTTTACTGTTACATCCCACATTCAAACCAGAGCAAAACTAACATTATGTCTTTTG
ATACTTCTAGTGATGTTAAAGCCAATACTCTACCAGGTAATGATCCAATCGCTGAAGTACCAAAACCTCTATACAAGCCAGAGATTCCATCAGACTTCAATATATTCCAG
AAAACTGACAGTCCACGCATAACATTCATGCAAAACGGTACAAACGCGATGGCAGAGGGAAAGTTGGTGGAGAACCTATTCCAGTTGATGTCGGTATCAGCAAGCGCCAA
CTCCGCCGCTGGTGCAGCTTCGGCGTCGAGAGCCATTGATCTGGCGGTTCGGTTCCGTGATCACGAAGCTATAGGTAAGGCTATGGCTATGACTACGGCTACGGCCACGG
CCACCAGCTTTGAGCAAAGAGAACTCGGTACGCTCTATGGTCTTTTGTTGTACCAATATCTAAAAAACTCCATTGCCATCCATGAGTTCGCAATCATTCTACATCAAGCG
CAACAACCTAGCCTCTGGAAATACTTTATCCTCACCCTTCTCACTTATGCTTTACCATTGGACATTTTTCTTGTGAAGCAAAAACATAATCCTGGGAGGCAGGTAGCAAA
AGGCGCTTCTTCGTTCTCCCTCTCGTGGGAATGTCGTCCACTCTGGCTCAGGAAGAAGCGGAATAGAGGCAAGCTAACATCGTGTTATGCTTCGTTTTGGCTCCGGTTCG
CTATAGACCGACCGGATTTGGAATTAGCCGACCGAACGGTTCGTCGGTCTATAGCGCTCGGGGTGGGCTGGGGTTTATATGCAACTAACTATACAAGGGTTGTTAAAAGG
CTATACAATATCTGGAAACCTGAGCTGATTGCCGCAGAGCAACAAACTAGACATGCGAATGTGCAAACTGCAAAAGATCATATTCCTAATAATAGATACATAAAAAGAGA
GAATTGCCTTACTCTTCAGCTCTCAATCAAATTATGGAGTGTTTCAGCGGAGATCTTAGCTATGTACTTCACCTTTCCGCAAGAAAGTAAGGGGATACTAATTCCCAAAT
GTCTTCTCACGATGAAAAGCTTTGTAAAAATCATTGCAACATCGCAAGCACTGAATCAAAAACTGCTGCTGCCGAAAGCGGAACTGATAGTGAAAGGAACAGATGCAGGA
ACCTGCTGGGGAGACCAGTCAACAGTGCTCATGTCGAATTTTAGATACCAAAATCTTAGACTAAAAGGAATTGACCCGTTGTTGCAATTGACCCGTTGTTGCAAAGCATA
CCACTCCTTAAGGAAGGACGATAACTACGAGGAGTGTTCATTGCACGCTCAATTGAGGAGTAAACTCGAAGAGCTTGGTCAGTGCCTCGACTACATTTTACAACATAAAC
ATGCTCCTTCAACTCTGTTGGTCGAGCTTGCAAGTCGTACTGAAGAGAGAAGGCACCAAAAATTGTCATATGGTCGAAGCAAATTATCACCACTAATTACACGAGGCAGC
CTCCTTCGTAGAAGTTGCTCATCCGAAGTGATAGCAGATGCTATCTTCATTCTTACAGCATTCGCACCTTCTTTTTTGATAGAAGATCTAAAACTCCACTCACTGGCTGC
GCAGCTGCACCTATTATGCCTTTTCCAACACCCTGAACAAATCCCTCAACGCCAGAAGTTTTTGCACCTTCAAGAGGCTTTATTTTCAGGAAGAAGAAATGCTGAAAACG
TGAGTCTCATCCCCAATTCTCTGCGGTCTGAAAAGAACTGGCATTGGAGTCAATGGCAATTGGTTATCAATTTGTACTCCAGACATTCTAAGTTTCAACCTGCATCAAAC
AAAGTACCAAAACACGAATTGAGACTACTGTCAAGTATGGAAAAGCTAGGGGAGCTTAGTTTTCTGGTAATGCAGAAAGATTACTCTTTCCGTGTATTGATTTTTAGAAT
TAGAGATTCAAGAAACCATAGGGAAGAATATTATATAGCAAGAACAGATCTGGACTCTTCAAATCAAGAGAGTAACAACCTTAAGATACAGATTGAAAGAAACAACCTTA
CCTACTGA
mRNA sequenceShow/hide mRNA sequence
ATGAAGAGAGAACATAGTTACCACTTGAGCATTCATTCACCCTACACACAAAATCTCATTTACCATGACGGCCTTCACACAGCAGTGAGACGCAAGTATCCCTTCTCTGA
TGGAAGCTCCACATTCACCGGAGTCGCCACCTTGTGCTTTGCAGCCTTCTGCAAAGACTCCAAAACCCTCACCACTTCCTCAACGTTCCTCCCAGTACTTGCTGGATATA
AGAAGCTCAGCTTCACCTTCTTGTCCGGACCGATGATGTGCAATGCCCGCGATGGCACTGCGCCACCCGATGAATCTTTCTCATCGGGATCGACCATGTTCAGTTCCTTG
ATGATCTCCCGCTTTGGATCGGCCAGTATTGGATATCCATCCAACACCAAGCGTGTCAAAGTAATGCACTTCAGCCAACACGACAAGTGGACAATTTTTGGCCTTGCTTC
GTTAATCCGATCAACGTATGAGAAAAAAGAAATAGAAATCCAGTTCCTTCTCATGATTAATCTGATACTGTGGGCCCTTTCACCTACTCCAAAGAATGATAATATTCATA
CCTATAATCACCAGCAGCAGGCTCTGAAGGAATTCAAACCCTGCATTTATAAGGTGGCCATGGGTGGGAGAAGCTTGAGTTTTGCATTGCCGAAGTCGCGTCTTTACTGT
GTCTACGGGAGTTGTAAGAACAGAGGAACAAGCACCTGCCACCATTCCTGCTGTGGCCTGAACCGTCACCATCTCCATGTGAGAAGGGGCATCACGAGTAGCAGATATAC
ATACAGTTTGAAATTAAAGCTGCTTTATAAACTGTTAAGTAGCAGAGAGGATCAAGTTTACTGTTACATCCCACATTCAAACCAGAGCAAAACTAACATTATGTCTTTTG
ATACTTCTAGTGATGTTAAAGCCAATACTCTACCAGGTAATGATCCAATCGCTGAAGTACCAAAACCTCTATACAAGCCAGAGATTCCATCAGACTTCAATATATTCCAG
AAAACTGACAGTCCACGCATAACATTCATGCAAAACGGTACAAACGCGATGGCAGAGGGAAAGTTGGTGGAGAACCTATTCCAGTTGATGTCGGTATCAGCAAGCGCCAA
CTCCGCCGCTGGTGCAGCTTCGGCGTCGAGAGCCATTGATCTGGCGGTTCGGTTCCGTGATCACGAAGCTATAGGTAAGGCTATGGCTATGACTACGGCTACGGCCACGG
CCACCAGCTTTGAGCAAAGAGAACTCGGTACGCTCTATGGTCTTTTGTTGTACCAATATCTAAAAAACTCCATTGCCATCCATGAGTTCGCAATCATTCTACATCAAGCG
CAACAACCTAGCCTCTGGAAATACTTTATCCTCACCCTTCTCACTTATGCTTTACCATTGGACATTTTTCTTGTGAAGCAAAAACATAATCCTGGGAGGCAGGTAGCAAA
AGGCGCTTCTTCGTTCTCCCTCTCGTGGGAATGTCGTCCACTCTGGCTCAGGAAGAAGCGGAATAGAGGCAAGCTAACATCGTGTTATGCTTCGTTTTGGCTCCGGTTCG
CTATAGACCGACCGGATTTGGAATTAGCCGACCGAACGGTTCGTCGGTCTATAGCGCTCGGGGTGGGCTGGGGTTTATATGCAACTAACTATACAAGGGTTGTTAAAAGG
CTATACAATATCTGGAAACCTGAGCTGATTGCCGCAGAGCAACAAACTAGACATGCGAATGTGCAAACTGCAAAAGATCATATTCCTAATAATAGATACATAAAAAGAGA
GAATTGCCTTACTCTTCAGCTCTCAATCAAATTATGGAGTGTTTCAGCGGAGATCTTAGCTATGTACTTCACCTTTCCGCAAGAAAGTAAGGGGATACTAATTCCCAAAT
GTCTTCTCACGATGAAAAGCTTTGTAAAAATCATTGCAACATCGCAAGCACTGAATCAAAAACTGCTGCTGCCGAAAGCGGAACTGATAGTGAAAGGAACAGATGCAGGA
ACCTGCTGGGGAGACCAGTCAACAGTGCTCATGTCGAATTTTAGATACCAAAATCTTAGACTAAAAGGAATTGACCCGTTGTTGCAATTGACCCGTTGTTGCAAAGCATA
CCACTCCTTAAGGAAGGACGATAACTACGAGGAGTGTTCATTGCACGCTCAATTGAGGAGTAAACTCGAAGAGCTTGGTCAGTGCCTCGACTACATTTTACAACATAAAC
ATGCTCCTTCAACTCTGTTGGTCGAGCTTGCAAGTCGTACTGAAGAGAGAAGGCACCAAAAATTGTCATATGGTCGAAGCAAATTATCACCACTAATTACACGAGGCAGC
CTCCTTCGTAGAAGTTGCTCATCCGAAGTGATAGCAGATGCTATCTTCATTCTTACAGCATTCGCACCTTCTTTTTTGATAGAAGATCTAAAACTCCACTCACTGGCTGC
GCAGCTGCACCTATTATGCCTTTTCCAACACCCTGAACAAATCCCTCAACGCCAGAAGTTTTTGCACCTTCAAGAGGCTTTATTTTCAGGAAGAAGAAATGCTGAAAACG
TGAGTCTCATCCCCAATTCTCTGCGGTCTGAAAAGAACTGGCATTGGAGTCAATGGCAATTGGTTATCAATTTGTACTCCAGACATTCTAAGTTTCAACCTGCATCAAAC
AAAGTACCAAAACACGAATTGAGACTACTGTCAAGTATGGAAAAGCTAGGGGAGCTTAGTTTTCTGGTAATGCAGAAAGATTACTCTTTCCGTGTATTGATTTTTAGAAT
TAGAGATTCAAGAAACCATAGGGAAGAATATTATATAGCAAGAACAGATCTGGACTCTTCAAATCAAGAGAGTAACAACCTTAAGATACAGATTGAAAGAAACAACCTTA
CCTACTGA
Protein sequenceShow/hide protein sequence
MKREHSYHLSIHSPYTQNLIYHDGLHTAVRRKYPFSDGSSTFTGVATLCFAAFCKDSKTLTTSSTFLPVLAGYKKLSFTFLSGPMMCNARDGTAPPDESFSSGSTMFSSL
MISRFGSASIGYPSNTKRVKVMHFSQHDKWTIFGLASLIRSTYEKKEIEIQFLLMINLILWALSPTPKNDNIHTYNHQQQALKEFKPCIYKVAMGGRSLSFALPKSRLYC
VYGSCKNRGTSTCHHSCCGLNRHHLHVRRGITSSRYTYSLKLKLLYKLLSSREDQVYCYIPHSNQSKTNIMSFDTSSDVKANTLPGNDPIAEVPKPLYKPEIPSDFNIFQ
KTDSPRITFMQNGTNAMAEGKLVENLFQLMSVSASANSAAGAASASRAIDLAVRFRDHEAIGKAMAMTTATATATSFEQRELGTLYGLLLYQYLKNSIAIHEFAIILHQA
QQPSLWKYFILTLLTYALPLDIFLVKQKHNPGRQVAKGASSFSLSWECRPLWLRKKRNRGKLTSCYASFWLRFAIDRPDLELADRTVRRSIALGVGWGLYATNYTRVVKR
LYNIWKPELIAAEQQTRHANVQTAKDHIPNNRYIKRENCLTLQLSIKLWSVSAEILAMYFTFPQESKGILIPKCLLTMKSFVKIIATSQALNQKLLLPKAELIVKGTDAG
TCWGDQSTVLMSNFRYQNLRLKGIDPLLQLTRCCKAYHSLRKDDNYEECSLHAQLRSKLEELGQCLDYILQHKHAPSTLLVELASRTEERRHQKLSYGRSKLSPLITRGS
LLRRSCSSEVIADAIFILTAFAPSFLIEDLKLHSLAAQLHLLCLFQHPEQIPQRQKFLHLQEALFSGRRNAENVSLIPNSLRSEKNWHWSQWQLVINLYSRHSKFQPASN
KVPKHELRLLSSMEKLGELSFLVMQKDYSFRVLIFRIRDSRNHREEYYIARTDLDSSNQESNNLKIQIERNNLTY