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Lsi05G014210 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G014210
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionPhyb2
Genome locationchr05:22159616..22160430
RNA-Seq ExpressionLsi05G014210
SyntenyLsi05G014210
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
No hits found
TrEMBL top hitse value%identityAlignment
A0A0A9DJK7 Phyb29.1e-1149.33Show/hide
Query:  IHRAEVWWHTTKPQSLVEFRPP---IASSSLPLI-TTAIANEAMEPILAIYWAWQPWGARRVEPTKQRCCISPAS
        ++R +VWWHTT P + +    P   + SSS PL+  TAI ++AM+P+ A+Y AW P GAR VEPTK   C SP S
Subjt:  IHRAEVWWHTTKPQSLVEFRPP---IASSSLPLI-TTAIANEAMEPILAIYWAWQPWGARRVEPTKQRCCISPAS

A0A0A9DSL1 Uncharacterized protein1.3e-1752.75Show/hide
Query:  PNACIRNSHAYRSGNGIHRAEVWWHTTKPQSLV-EFRPP--IASSSLPLI-TTAIANEAMEPILAIYWAWQPWGARRVEPTKQRCCISPAS
        P ACIRNS AY +G G++R +VWWHTT P + + E  PP  + SSS PL+  TA+ ++AM+P++A+Y AW P GAR VEPTK   C  P S
Subjt:  PNACIRNSHAYRSGNGIHRAEVWWHTTKPQSLV-EFRPP--IASSSLPLI-TTAIANEAMEPILAIYWAWQPWGARRVEPTKQRCCISPAS

A0A0A9JX97 Uncharacterized protein2.2e-0453.7Show/hide
Query:  PP--IASSSLPLI-TTAIANEAMEPILAIYWAWQPWGARRVEPTKQRCCISPAS
        PP  + SSS PL+  TAI ++AM+P+ A+Y AW P GAR VEPTK   C +P S
Subjt:  PP--IASSSLPLI-TTAIANEAMEPILAIYWAWQPWGARRVEPTKQRCCISPAS

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGACAACAGCCATACCACAAACTGCATCACCCAGCAAGGCTGCCCCTGGATATCCAGCATCGCCCAAGCTATCTGTACTTAAACCAGTTGAATCTCCATGGAAAGCCAA
CAACCATTCCACAATATCCTTTATTTGGGCCTCAGTTGGCGTCACACCCAGAGGCCCAAATGCTTGCATTAGAAACTCACACGCATACCGGAGCGGGAACGGAATACACC
GAGCAGAGGTATGGTGGCATACAACCAAACCCCAAAGCCTCGTTGAATTTCGCCCACCGATAGCTTCATCATCATTACCATTGATAACAACTGCCATTGCTAACGAAGCA
ATGGAGCCCATATTGGCCATATACTGGGCATGGCAGCCATGGGGAGCACGAAGAGTTGAACCCACCAAGCAGAGATGTTGCATAAGCCCTGCATCCTGA
mRNA sequenceShow/hide mRNA sequence
ATGACAACAGCCATACCACAAACTGCATCACCCAGCAAGGCTGCCCCTGGATATCCAGCATCGCCCAAGCTATCTGTACTTAAACCAGTTGAATCTCCATGGAAAGCCAA
CAACCATTCCACAATATCCTTTATTTGGGCCTCAGTTGGCGTCACACCCAGAGGCCCAAATGCTTGCATTAGAAACTCACACGCATACCGGAGCGGGAACGGAATACACC
GAGCAGAGGTATGGTGGCATACAACCAAACCCCAAAGCCTCGTTGAATTTCGCCCACCGATAGCTTCATCATCATTACCATTGATAACAACTGCCATTGCTAACGAAGCA
ATGGAGCCCATATTGGCCATATACTGGGCATGGCAGCCATGGGGAGCACGAAGAGTTGAACCCACCAAGCAGAGATGTTGCATAAGCCCTGCATCCTGA
Protein sequenceShow/hide protein sequence
MTTAIPQTASPSKAAPGYPASPKLSVLKPVESPWKANNHSTISFIWASVGVTPRGPNACIRNSHAYRSGNGIHRAEVWWHTTKPQSLVEFRPPIASSSLPLITTAIANEA
MEPILAIYWAWQPWGARRVEPTKQRCCISPAS