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Lsi05G014390 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G014390
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:22283710..22287151
RNA-Seq ExpressionLsi05G014390
SyntenyLsi05G014390
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
PON55278.1 hypothetical protein PanWU01x14_189670 [Parasponia andersonii]3.5e-3561.99Show/hide
Query:  MSFPAISKTSSAGALSFSILAMAIAPSSSKFRE----------TPPSTPNMLSRRSSFFNPVQVLSAKDKATPPSESILVEEQRKSSNRGERFTTSAIAK
        MSFPAIS+TSS GA S   LA A  PSSSK R            P STPN+LSRRSSFF  VQ  S    ATPPSE  LVEE RKSS RGE  T   IA 
Subjt:  MSFPAISKTSSAGALSFSILAMAIAPSSSKFRE----------TPPSTPNMLSRRSSFFNPVQVLSAKDKATPPSESILVEEQRKSSNRGERFTTSAIAK

Query:  APSSPVISSKQACDFRREPKALTPFSPKALFERFRDLKMLPSKASENSFITSRASDSGLPAIKSERSTSFN
        APSSPVI           P ALTPFSP ALFER R+ K  PS+A+EN FITSRAS SGLPAIKS+RSTSFN
Subjt:  APSSPVISSKQACDFRREPKALTPFSPKALFERFRDLKMLPSKASENSFITSRASDSGLPAIKSERSTSFN
PON63944.1 hypothetical protein TorRG33x02_274990 [Trema orientale]3.5e-3561.99Show/hide
Query:  MSFPAISKTSSAGALSFSILAMAIAPSSSKFRE----------TPPSTPNMLSRRSSFFNPVQVLSAKDKATPPSESILVEEQRKSSNRGERFTTSAIAK
        MSFPAIS+TSS GA S   LA A  PSSSK R            P STPN+LSRRSSFF  VQ  SA   ATPPSE  LVEE RKSS  GE  T   IA 
Subjt:  MSFPAISKTSSAGALSFSILAMAIAPSSSKFRE----------TPPSTPNMLSRRSSFFNPVQVLSAKDKATPPSESILVEEQRKSSNRGERFTTSAIAK

Query:  APSSPVISSKQACDFRREPKALTPFSPKALFERFRDLKMLPSKASENSFITSRASDSGLPAIKSERSTSFN
        APSSPVI           P ALTPFSP ALFER R+ K  PS+A+EN FITSRAS SGLPAIKS+RSTSFN
Subjt:  APSSPVISSKQACDFRREPKALTPFSPKALFERFRDLKMLPSKASENSFITSRASDSGLPAIKSERSTSFN
TrEMBL top hitse value%identityAlignment
A0A2P5C2I8 Uncharacterized protein1.7e-3561.99Show/hide
Query:  MSFPAISKTSSAGALSFSILAMAIAPSSSKFRE----------TPPSTPNMLSRRSSFFNPVQVLSAKDKATPPSESILVEEQRKSSNRGERFTTSAIAK
        MSFPAIS+TSS GA S   LA A  PSSSK R            P STPN+LSRRSSFF  VQ  S    ATPPSE  LVEE RKSS RGE  T   IA 
Subjt:  MSFPAISKTSSAGALSFSILAMAIAPSSSKFRE----------TPPSTPNMLSRRSSFFNPVQVLSAKDKATPPSESILVEEQRKSSNRGERFTTSAIAK

Query:  APSSPVISSKQACDFRREPKALTPFSPKALFERFRDLKMLPSKASENSFITSRASDSGLPAIKSERSTSFN
        APSSPVI           P ALTPFSP ALFER R+ K  PS+A+EN FITSRAS SGLPAIKS+RSTSFN
Subjt:  APSSPVISSKQACDFRREPKALTPFSPKALFERFRDLKMLPSKASENSFITSRASDSGLPAIKSERSTSFN
A0A2P5CSA8 Uncharacterized protein1.7e-3561.99Show/hide
Query:  MSFPAISKTSSAGALSFSILAMAIAPSSSKFRE----------TPPSTPNMLSRRSSFFNPVQVLSAKDKATPPSESILVEEQRKSSNRGERFTTSAIAK
        MSFPAIS+TSS GA S   LA A  PSSSK R            P STPN+LSRRSSFF  VQ  SA   ATPPSE  LVEE RKSS  GE  T   IA 
Subjt:  MSFPAISKTSSAGALSFSILAMAIAPSSSKFRE----------TPPSTPNMLSRRSSFFNPVQVLSAKDKATPPSESILVEEQRKSSNRGERFTTSAIAK

Query:  APSSPVISSKQACDFRREPKALTPFSPKALFERFRDLKMLPSKASENSFITSRASDSGLPAIKSERSTSFN
        APSSPVI           P ALTPFSP ALFER R+ K  PS+A+EN FITSRAS SGLPAIKS+RSTSFN
Subjt:  APSSPVISSKQACDFRREPKALTPFSPKALFERFRDLKMLPSKASENSFITSRASDSGLPAIKSERSTSFN
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTTATTCCTTGTCGTCGCCATCTTCCCCTTCAGGATCATTCTCATCCAAGGGCCCGAGCATATTCGGAAATTTCTTGAAAATATCCTTCAACTCATCAATGCCTTCAT
CAGAAATGAAATTTCCATTGATGTTCAGCAGTTGAAAACCAGGCTTTTGAACCACACTAATGCAGAAGCAGCTTCAGCTGTAATGTCATTTCCAGCCATTTCCAAGACTT
CAAGTGCAGGAGCACTGTCCTTCAGTATATTGGCTATGGCAATTGCACCTTCATCTTCCAAGTTCAGAGAAACTCCACCTTCCACTCCAAACATGTTGTCTCGAAGGTCA
AGTTTTTTCAATCCGGTACAAGTCCTGAGTGCTAAAGATAAGGCAACACCCCCCTCTGAGTCTATCCTTGTAGAGGAGCAACGGAAATCTTCCAATAGAGGAGAACGCTT
TACAACTTCGGCGATAGCAAAAGCACCTTCGTCGCCCGTCATCTCCTCCAAACAAGCCTGTGATTTCAGGAGAGAGCCAAAAGCTCTAACACCCTTCTCACCTAAGGCAT
TGTTTGAGAGGTTCAGGGATCTCAAGATGCTGCCTTCTAAAGCATCAGAGAACAGTTTCATAACTTCTAGAGCTTCTGACTCTGGTCTTCCTGCAATAAAATCAGAGAGA
TCTACTTCTTTTAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGTTATTCCTTGTCGTCGCCATCTTCCCCTTCAGGATCATTCTCATCCAAGGGCCCGAGCATATTCGGAAATTTCTTGAAAATATCCTTCAACTCATCAATGCCTTCAT
CAGAAATGAAATTTCCATTGATGTTCAGCAGTTGAAAACCAGGCTTTTGAACCACACTAATGCAGAAGCAGCTTCAGCTGTAATGTCATTTCCAGCCATTTCCAAGACTT
CAAGTGCAGGAGCACTGTCCTTCAGTATATTGGCTATGGCAATTGCACCTTCATCTTCCAAGTTCAGAGAAACTCCACCTTCCACTCCAAACATGTTGTCTCGAAGGTCA
AGTTTTTTCAATCCGGTACAAGTCCTGAGTGCTAAAGATAAGGCAACACCCCCCTCTGAGTCTATCCTTGTAGAGGAGCAACGGAAATCTTCCAATAGAGGAGAACGCTT
TACAACTTCGGCGATAGCAAAAGCACCTTCGTCGCCCGTCATCTCCTCCAAACAAGCCTGTGATTTCAGGAGAGAGCCAAAAGCTCTAACACCCTTCTCACCTAAGGCAT
TGTTTGAGAGGTTCAGGGATCTCAAGATGCTGCCTTCTAAAGCATCAGAGAACAGTTTCATAACTTCTAGAGCTTCTGACTCTGGTCTTCCTGCAATAAAATCAGAGAGA
TCTACTTCTTTTAATTGA
Protein sequenceShow/hide protein sequence
MLFLVVAIFPFRIILIQGPEHIRKFLENILQLINAFIRNEISIDVQQLKTRLLNHTNAEAASAVMSFPAISKTSSAGALSFSILAMAIAPSSSKFRETPPSTPNMLSRRS
SFFNPVQVLSAKDKATPPSESILVEEQRKSSNRGERFTTSAIAKAPSSPVISSKQACDFRREPKALTPFSPKALFERFRDLKMLPSKASENSFITSRASDSGLPAIKSER
STSFN