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Lsi05G015310 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G015310
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionSANT domain-containing protein
Genome locationchr05:23108639..23109040
RNA-Seq ExpressionLsi05G015310
SyntenyLsi05G015310
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049486.1 uncharacterized protein E6C27_scaffold171G007400 [Cucumis melo var. makuwa]1.0e-0956.79Show/hide
Query:  VFSSSTFKLCVLHFTSAAVLCGNSETKPLYPVNLNYLHLLNHFLLHSSNLGRCF-SDRLNLGLS-CFVPVQCPVVIRKLVT
        VFS       VLHF + AVLCGNSETK LYPVNL  +  L  F     +    F   R NLGLS CF PVQCPVVI KLVT
Subjt:  VFSSSTFKLCVLHFTSAAVLCGNSETKPLYPVNLNYLHLLNHFLLHSSNLGRCF-SDRLNLGLS-CFVPVQCPVVIRKLVT
TrEMBL top hitse value%identityAlignment
A0A5D3D0I3 SANT domain-containing protein5.1e-1056.79Show/hide
Query:  VFSSSTFKLCVLHFTSAAVLCGNSETKPLYPVNLNYLHLLNHFLLHSSNLGRCF-SDRLNLGLS-CFVPVQCPVVIRKLVT
        VFS       VLHF + AVLCGNSETK LYPVNL  +  L  F     +    F   R NLGLS CF PVQCPVVI KLVT
Subjt:  VFSSSTFKLCVLHFTSAAVLCGNSETKPLYPVNLNYLHLLNHFLLHSSNLGRCF-SDRLNLGLS-CFVPVQCPVVIRKLVT
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTGCCAAAATGCTTACTTTCGCACGAGAACGGATGCTACTTTGTAATCATACACTGTCCATACAAAACTAATCTAATGAAGCCGTATGGTGAAGCGAGTCTCCT
TCCAACTCCAGTGGCTGTCGTCTTCTCATCCTCCACATTCAAGCTGTGTGTGCTTCACTTTACATCTGCAGCAGTTCTCTGTGGAAATTCAGAAACTAAGCCCCTTTACC
CTGTGAACTTGAATTACTTGCATCTCTTAAATCATTTTTTGCTGCACAGTTCGAATCTTGGTCGATGTTTCTCTGATCGTTTGAATCTCGGACTCTCCTGTTTTGTACCT
GTACAGTGTCCAGTGGTGATAAGAAAACTTGTCACATGA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTGCCAAAATGCTTACTTTCGCACGAGAACGGATGCTACTTTGTAATCATACACTGTCCATACAAAACTAATCTAATGAAGCCGTATGGTGAAGCGAGTCTCCT
TCCAACTCCAGTGGCTGTCGTCTTCTCATCCTCCACATTCAAGCTGTGTGTGCTTCACTTTACATCTGCAGCAGTTCTCTGTGGAAATTCAGAAACTAAGCCCCTTTACC
CTGTGAACTTGAATTACTTGCATCTCTTAAATCATTTTTTGCTGCACAGTTCGAATCTTGGTCGATGTTTCTCTGATCGTTTGAATCTCGGACTCTCCTGTTTTGTACCT
GTACAGTGTCCAGTGGTGATAAGAAAACTTGTCACATGA
Protein sequenceShow/hide protein sequence
MEVPKCLLSHENGCYFVIIHCPYKTNLMKPYGEASLLPTPVAVVFSSSTFKLCVLHFTSAAVLCGNSETKPLYPVNLNYLHLLNHFLLHSSNLGRCFSDRLNLGLSCFVP
VQCPVVIRKLVT