; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G015340 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G015340
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionflowering-promoting factor 1-like protein 1
Genome locationchr05:23134084..23134419
RNA-Seq ExpressionLsi05G015340
SyntenyLsi05G015340
Gene Ontology termsGO:0009909 - regulation of flower development (biological process)
InterPro domainsIPR039274 - Flowering-promoting factor 1


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049489.1 flowering-promoting factor 1-like protein 3 [Cucumis melo var. makuwa]5.5e-5087.93Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETT-----GAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDI
        MSGVW+FDNGVIRLVERAGA ETT     G  G+RKVL+YTPTNE MTSYEVL+NKLSMLGWEVYYEDGEVMQFHKPSSVDLISLP DFNKLKARHLYDI
Subjt:  MSGVWVFDNGVIRLVERAGAAETT-----GAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDI

Query:  VVRNRNLFQVKDMQSH
        VVRNRNLFQVKDMQSH
Subjt:  VVRNRNLFQVKDMQSH

KGN57101.1 hypothetical protein Csa_010574 [Cucumis sativus]3.8e-5192.04Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETT--GAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVR
        MSGVW+FDNGVIRLVERAGAAETT  G  G+RKVLIYTPTNE MTSYEVL+NKLSMLGWEVYYEDGEVMQFHKPSSVDLISLP DFNKLKARHLYDIVVR
Subjt:  MSGVWVFDNGVIRLVERAGAAETT--GAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVR

Query:  NRNLFQVKDMQSH
        NRNLFQVKDMQSH
Subjt:  NRNLFQVKDMQSH

XP_022956217.1 flowering-promoting factor 1-like protein 1 [Cucurbita moschata]3.6e-4991.82Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNR
        MSGVWVFDNGVIRLVERAGAAE TGAGGRRKVLIYTPTNE MTSY VLKNKL+ LGWEVYYED EVMQFHKPSSVDLIS+PTDFNKLKARHLYDIVV+NR
Subjt:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNR

Query:  NLFQVKDMQS
        N+FQVKDMQS
Subjt:  NLFQVKDMQS

XP_022979994.1 flowering-promoting factor 1-like protein 1 [Cucurbita maxima]7.9e-4990.91Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNR
        MSGVWVFDNGVIRLVERAGA E TGAGGRRKVLIYTPTNE MTSY VLKNKL+ LGWEVYYED EVMQFHKPSSVDLIS+PTDFNKLKARHLYDIVV+NR
Subjt:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNR

Query:  NLFQVKDMQS
        N+FQVKDMQS
Subjt:  NLFQVKDMQS

XP_023528953.1 flowering-promoting factor 1-like protein 1 [Cucurbita pepo subsp. pepo]1.8e-4890Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNR
        MSGVWVFDNGVIRLVERAGAAE TGAGGRRKVLIY PTNE MTSY +LKNKL+ LGWEVYYED EVMQFHKPSSVDLIS+PTDFNKLKARHLYDIVV+NR
Subjt:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNR

Query:  NLFQVKDMQS
        N+FQVKDMQS
Subjt:  NLFQVKDMQS

TrEMBL top hitse value%identityAlignment
A0A0A0LAK6 Uncharacterized protein1.8e-5192.04Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETT--GAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVR
        MSGVW+FDNGVIRLVERAGAAETT  G  G+RKVLIYTPTNE MTSYEVL+NKLSMLGWEVYYEDGEVMQFHKPSSVDLISLP DFNKLKARHLYDIVVR
Subjt:  MSGVWVFDNGVIRLVERAGAAETT--GAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVR

Query:  NRNLFQVKDMQSH
        NRNLFQVKDMQSH
Subjt:  NRNLFQVKDMQSH

A0A5A7U7L7 Flowering-promoting factor 1-like protein 32.7e-5087.93Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETT-----GAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDI
        MSGVW+FDNGVIRLVERAGA ETT     G  G+RKVL+YTPTNE MTSYEVL+NKLSMLGWEVYYEDGEVMQFHKPSSVDLISLP DFNKLKARHLYDI
Subjt:  MSGVWVFDNGVIRLVERAGAAETT-----GAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDI

Query:  VVRNRNLFQVKDMQSH
        VVRNRNLFQVKDMQSH
Subjt:  VVRNRNLFQVKDMQSH

A0A6J1GVQ4 flowering-promoting factor 1-like protein 11.7e-4991.82Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNR
        MSGVWVFDNGVIRLVERAGAAE TGAGGRRKVLIYTPTNE MTSY VLKNKL+ LGWEVYYED EVMQFHKPSSVDLIS+PTDFNKLKARHLYDIVV+NR
Subjt:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNR

Query:  NLFQVKDMQS
        N+FQVKDMQS
Subjt:  NLFQVKDMQS

A0A6J1IC95 flowering-promoting factor 1-like protein 24.7e-3975.45Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNR
        MSGVWVFDNGVIRL E  G +   G    R VLIYT TNE MT+  VLKNKL  LGWE+YYED E++QFHKPSSVDLISLPTDFNK+KARHLYD+VVRNR
Subjt:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNR

Query:  NLFQVKDMQS
        NLF VKDMQS
Subjt:  NLFQVKDMQS

A0A6J1IY48 flowering-promoting factor 1-like protein 13.8e-4990.91Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNR
        MSGVWVFDNGVIRLVERAGA E TGAGGRRKVLIYTPTNE MTSY VLKNKL+ LGWEVYYED EVMQFHKPSSVDLIS+PTDFNKLKARHLYDIVV+NR
Subjt:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNR

Query:  NLFQVKDMQS
        N+FQVKDMQS
Subjt:  NLFQVKDMQS

SwissProt top hitse value%identityAlignment
O23624 Flowering-promoting factor 11.3e-2554.13Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDG--EVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVR
        MSGVWVF NGVIRLVE    +  +    RRKV++Y PT EV++SY  L+  L  LGWE Y+  G  +++QFHK SS+DLISLP DF K  + ++YDIVV+
Subjt:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDG--EVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVR

Query:  NRNLFQVKD
        N N F V+D
Subjt:  NRNLFQVKD

Q0E1D7 Flowering-promoting factor 1-like protein 33.6e-2852.68Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETT-----GAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDI
        M+GVWVF +G++R VE  G+ E++     G GGRRKVL++ P+ EV+ SYEVL+ +L  LGWE Y  D  ++QFH+ S+V LIS+P DF+K K  H+YDI
Subjt:  MSGVWVFDNGVIRLVERAGAAETT-----GAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDI

Query:  VVRNRNLFQVKD
        VV+ RN+F+V+D
Subjt:  VVRNRNLFQVKD

Q8LR63 Flowering-promoting factor 1-like protein 21.2e-2650.39Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETTGAGG-----------RRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDG--------EVMQFHKPSSVDLISLP
        MSGVWVF NGV++LVE   A+  +G GG           RRK L++ PT EV+TSY  L+ KL+ LGWE YY  G         ++QFHK SSVDLISLP
Subjt:  MSGVWVFDNGVIRLVERAGAAETTGAGG-----------RRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDG--------EVMQFHKPSSVDLISLP

Query:  TDFNKLKARHLYDIVVRNRNLFQVKDM
         DF++  + H+YDIVV+NR+ F+V D+
Subjt:  TDFNKLKARHLYDIVVRNRNLFQVKDM

Q9LGE3 Flowering-promoting factor 1-like protein 11.1e-2958.33Show/hide
Query:  MSGVWVFDNGVIRLVERAGA-AETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRN
        MSGVWVF NGV+RLVE+  A A T  AGGRRK L++TP+ +V++SY  L+ +L+ LGWE YYED  + QFHK  S+DLISLP DF+   + H+YDIVV+N
Subjt:  MSGVWVFDNGVIRLVERAGA-AETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRN

Query:  RNLFQVKD
        R+ F+V D
Subjt:  RNLFQVKD

Q9LXB5 Flowering-promoting factor 1-like protein 27.5e-2653.64Show/hide
Query:  MSGVWVFDNGVIRLVE--RAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYE-DGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVV
        MSGVWVF+NGVIRLVE        +T + GRR VL+Y PT E ++SY  L+  L  LGWE Y+  D +++Q+HK SS+DLISLP DF+K  + ++YDIVV
Subjt:  MSGVWVFDNGVIRLVE--RAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYE-DGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVV

Query:  RNRNLFQVKD
        +N N F V+D
Subjt:  RNRNLFQVKD

Arabidopsis top hitse value%identityAlignment
AT4G31380.1 FPF1-like protein 13.8e-2548.39Show/hide
Query:  MSGVWVFD-NGVIRLVER------AGAAETTGAGG------RRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYY---EDGEVMQFHKPSSVDLISLPTDF
        MSGVWVF+ NGV+RLVE         ++E++ +GG      RRK+L++ P++EV++SY  L+  L  LGWE YY       ++QFHK +S+DLISLP DF
Subjt:  MSGVWVFD-NGVIRLVER------AGAAETTGAGG------RRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYY---EDGEVMQFHKPSSVDLISLPTDF

Query:  NKLKARHLYDIVVRNRNLFQVKDM
        +K  + H+YDIVV+N N+F V+DM
Subjt:  NKLKARHLYDIVVRNRNLFQVKDM

AT5G10625.1 BEST Arabidopsis thaliana protein match is: flowering promoting factor 1 (TAIR:AT5G24860.1)5.3e-2753.64Show/hide
Query:  MSGVWVFDNGVIRLVE--RAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYE-DGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVV
        MSGVWVF+NGVIRLVE        +T + GRR VL+Y PT E ++SY  L+  L  LGWE Y+  D +++Q+HK SS+DLISLP DF+K  + ++YDIVV
Subjt:  MSGVWVFDNGVIRLVE--RAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYE-DGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVV

Query:  RNRNLFQVKD
        +N N F V+D
Subjt:  RNRNLFQVKD

AT5G24860.1 flowering promoting factor 19.1e-2754.13Show/hide
Query:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDG--EVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVR
        MSGVWVF NGVIRLVE    +  +    RRKV++Y PT EV++SY  L+  L  LGWE Y+  G  +++QFHK SS+DLISLP DF K  + ++YDIVV+
Subjt:  MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDG--EVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVR

Query:  NRNLFQVKD
        N N F V+D
Subjt:  NRNLFQVKD


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGTCAGGCGTTTGGGTTTTCGACAACGGCGTGATTCGTCTCGTAGAGAGGGCGGGGGCAGCAGAGACGACGGGGGCAGGAGGACGGAGGAAAGTTCTAATATACACGCC
GACGAACGAGGTGATGACGTCGTACGAGGTGCTTAAAAACAAGCTGTCAATGTTGGGATGGGAAGTGTACTATGAAGATGGAGAAGTTATGCAATTTCATAAGCCTTCTT
CTGTGGATCTAATTTCTCTTCCAACAGATTTTAATAAGCTGAAGGCTAGACACTTATACGACATCGTTGTGAGGAACCGTAATCTTTTTCAAGTTAAGGACATGCAGTCC
CACTAA
mRNA sequenceShow/hide mRNA sequence
ATGTCAGGCGTTTGGGTTTTCGACAACGGCGTGATTCGTCTCGTAGAGAGGGCGGGGGCAGCAGAGACGACGGGGGCAGGAGGACGGAGGAAAGTTCTAATATACACGCC
GACGAACGAGGTGATGACGTCGTACGAGGTGCTTAAAAACAAGCTGTCAATGTTGGGATGGGAAGTGTACTATGAAGATGGAGAAGTTATGCAATTTCATAAGCCTTCTT
CTGTGGATCTAATTTCTCTTCCAACAGATTTTAATAAGCTGAAGGCTAGACACTTATACGACATCGTTGTGAGGAACCGTAATCTTTTTCAAGTTAAGGACATGCAGTCC
CACTAA
Protein sequenceShow/hide protein sequence
MSGVWVFDNGVIRLVERAGAAETTGAGGRRKVLIYTPTNEVMTSYEVLKNKLSMLGWEVYYEDGEVMQFHKPSSVDLISLPTDFNKLKARHLYDIVVRNRNLFQVKDMQS
H