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Lsi05G015510 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G015510
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDynein light chain
Genome locationchr05:23293556..23293987
RNA-Seq ExpressionLsi05G015510
SyntenyLsi05G015510
Gene Ontology termsGO:0007017 - microtubule-based process (biological process)
GO:0005737 - cytoplasm (cellular component)
GO:0005874 - microtubule (cellular component)
GO:0030286 - dynein complex (cellular component)
GO:0045505 - dynein intermediate chain binding (molecular function)
GO:0051959 - dynein light intermediate chain binding (molecular function)
InterPro domainsIPR001372 - Dynein light chain, type 1/2
IPR037177 - Dynein light chain superfamily


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597532.1 Dynein light chain 1, cytoplasmic, partial [Cucurbita argyrosperma subsp. sororia]2.0e-3976.72Show/hide
Query:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTFFHSL---
        MN +S RSNP PLMVKPES+DRKPSSAA + KKIVIKSADMF DMQKEA+DIAIAAFEKHSVEKDVAE IKKEFDK HGPTWHC++GRNFG+ FHSL   
Subjt:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTFFHSL---

Query:  --SLLIFAFFHSDGPN
          S LIF    SDG N
Subjt:  --SLLIFAFFHSDGPN

KAG7028990.1 Dynein light chain 1, cytoplasmic [Cucurbita argyrosperma subsp. argyrosperma]2.4e-3783.51Show/hide
Query:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTFFHSL
        MN +S RSNP PLMVKPES+DRKPSSAA + KKIVIKSADMF DMQKEA+DIAIAAFEKHSVEKDVAE IKKEFDK HGPTWHC++GRNFG+ FHSL
Subjt:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTFFHSL

XP_022945423.1 dynein light chain 1, cytoplasmic-like [Cucurbita moschata]2.3e-3582.8Show/hide
Query:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF
        MN +S RSNP PLMVKPES+DRKPSSAA + KKIVIKSADMF DMQKEA+DIAIAAFEKHSVEKDVAE IKKEFDK HGPTWHC++GRNFG++
Subjt:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF

XP_022979977.1 dynein 8 kDa light chain, flagellar outer arm-like [Cucurbita maxima]3.3e-3483.87Show/hide
Query:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF
        MNQES RSNP PLMVKPES+DRK SS AA +KKIVIKSADMF  MQKEA+DIAIAAFEKHSVEKDVAE IKKEFD+ HGPTWHCIVGRNFG++
Subjt:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF

XP_038904701.1 dynein light chain 1, cytoplasmic-like [Benincasa hispida]4.0e-4092.47Show/hide
Query:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF
        MNQESHRSNPPPLMVKPES DRKPSSAAA+SKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKD+AE IKK+FDKNHGPTWHCIVGRNFG++
Subjt:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF

TrEMBL top hitse value%identityAlignment
A0A6J1C8U0 Dynein light chain6.7e-3377.42Show/hide
Query:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF
        MNQ++ R+NP  LMVKPES+DRKPSSA  L++K+VIKSADMF DMQKEA+DIAIAAFEK++VEKDVAE IK+EFDK HGPTWHCIVGRNFG++
Subjt:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF

A0A6J1G0U9 Dynein light chain1.1e-3582.8Show/hide
Query:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF
        MN +S RSNP PLMVKPES+DRKPSSAA + KKIVIKSADMF DMQKEA+DIAIAAFEKHSVEKDVAE IKKEFDK HGPTWHC++GRNFG++
Subjt:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF

A0A6J1GVA3 Dynein light chain2.7e-3485.11Show/hide
Query:  MNQESHRSNPPPLMVKPESQDRKPSS-AAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF
        MNQES RSNP PLMVKPES+DRK SS AAA +KKIVIKSADMF DMQKEA+DIAIAAFEKHSVEKDVAE IKKEFD+ HGPTWHCIVGRNFG++
Subjt:  MNQESHRSNPPPLMVKPESQDRKPSS-AAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF

A0A6J1IC60 Dynein light chain1.4e-3381.72Show/hide
Query:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF
        MN +S RSN P LMVKPES+DRKPSSAA + KKIVIKSADMF DMQKEA+DIAIAAFEKHSVEKDVAE IKKEFDK HGPTWHC++GRNFG++
Subjt:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF

A0A6J1IQ69 Dynein light chain1.6e-3483.87Show/hide
Query:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF
        MNQES RSNP PLMVKPES+DRK SS AA +KKIVIKSADMF  MQKEA+DIAIAAFEKHSVEKDVAE IKKEFD+ HGPTWHCIVGRNFG++
Subjt:  MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF

SwissProt top hitse value%identityAlignment
Q22799 Dynein light chain 1, cytoplasmic1.7e-1762.5Show/hide
Query:  LSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF
        + +K VIK+ADM  DMQ++AID A  A EK+++EKD+A  IKKEFDK + PTWHCIVGRNFG++
Subjt:  LSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF

Q3MHR3 Dynein light chain 2, cytoplasmic2.9e-1762.9Show/hide
Query:  KKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF
        +K VIK+ADM  DMQ++A+D A  A EK+++EKD+A  IKKEFDK + PTWHCIVGRNFG++
Subjt:  KKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF

Q78P75 Dynein light chain 2, cytoplasmic2.9e-1762.9Show/hide
Query:  KKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF
        +K VIK+ADM  DMQ++A+D A  A EK+++EKD+A  IKKEFDK + PTWHCIVGRNFG++
Subjt:  KKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF

Q96FJ2 Dynein light chain 2, cytoplasmic2.9e-1762.9Show/hide
Query:  KKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF
        +K VIK+ADM  DMQ++A+D A  A EK+++EKD+A  IKKEFDK + PTWHCIVGRNFG++
Subjt:  KKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF

Q9D0M5 Dynein light chain 2, cytoplasmic2.9e-1762.9Show/hide
Query:  KKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF
        +K VIK+ADM  DMQ++A+D A  A EK+++EKD+A  IKKEFDK + PTWHCIVGRNFG++
Subjt:  KKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF

Arabidopsis top hitse value%identityAlignment
AT1G52240.2 RHO guanyl-nucleotide exchange factor 113.7e-0740.79Show/hide
Query:  LSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVE--KDVAELIKKEFDKNHGPTWHCIVGRNFGTFF-HSLSLLIF
        L  K +++ +DM   MQ +A+  A  A +   V   K +A  IKKEFD+ +G  W C+VG NFG FF HS    I+
Subjt:  LSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVE--KDVAELIKKEFDKNHGPTWHCIVGRNFGTFF-HSLSLLIF

AT3G16120.1 Dynein light chain type 1 family protein2.4e-0640Show/hide
Query:  LSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSV--EKDVAELIKKEFDKNHGPTWHCIVGRNFGTFF-HSLSLLIFAFFH
        L  K  ++  DM   MQ +A+ IA  + +   V     +A  IKKEFD+ +G  W C+VG NFG FF HS     F +FH
Subjt:  LSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSV--EKDVAELIKKEFDKNHGPTWHCIVGRNFGTFF-HSLSLLIFAFFH

AT4G15930.1 Dynein light chain type 1 family protein1.4e-2279.03Show/hide
Query:  KKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF
        K+ VIKSADM  DMQKEAI+IAI+AFEK+SVEKD+AE IKKEFDK HG TWHCIVGRNFG++
Subjt:  KKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTF

AT4G27360.1 Dynein light chain type 1 family protein8.2e-0739.39Show/hide
Query:  LSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEK--DVAELIKKEFDKNHGPTWHCIVGRNFGTF
        L  K V+   DM   M+++A+ +A  A +   V +   +A  IKKEFD+++G  W CIVG +FG+F
Subjt:  LSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEK--DVAELIKKEFDKNHGPTWHCIVGRNFGTF

AT5G20110.1 Dynein light chain type 1 family protein1.6e-0745Show/hide
Query:  AAALSKKIVIKSADMFSDMQKEAIDIA---IAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTFF-HSLSLLIF
        AAA    + I +ADM   MQ  A   A   + + EK S  K +A  +KKEFDK +GP WHCIVG +FG+F  HS    I+
Subjt:  AAALSKKIVIKSADMFSDMQKEAIDIA---IAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTFF-HSLSLLIF


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGAACCAAGAATCTCATCGCTCCAATCCTCCACCTCTAATGGTGAAGCCTGAATCTCAGGATCGCAAACCCTCATCTGCCGCTGCCCTCTCCAAGAAAATCGTCATCAA
AAGCGCCGATATGTTCAGCGACATGCAGAAGGAAGCTATTGACATTGCCATAGCTGCATTTGAGAAGCATTCCGTTGAGAAGGATGTCGCCGAACTGATAAAGAAGGAGT
TTGATAAGAATCATGGACCCACTTGGCATTGCATCGTCGGTCGTAATTTTGGTACCTTTTTTCACTCTCTAAGCCTCTTAATTTTCGCTTTCTTTCACTCTGATGGACCG
AATCTCTATTGA
mRNA sequenceShow/hide mRNA sequence
ATGAACCAAGAATCTCATCGCTCCAATCCTCCACCTCTAATGGTGAAGCCTGAATCTCAGGATCGCAAACCCTCATCTGCCGCTGCCCTCTCCAAGAAAATCGTCATCAA
AAGCGCCGATATGTTCAGCGACATGCAGAAGGAAGCTATTGACATTGCCATAGCTGCATTTGAGAAGCATTCCGTTGAGAAGGATGTCGCCGAACTGATAAAGAAGGAGT
TTGATAAGAATCATGGACCCACTTGGCATTGCATCGTCGGTCGTAATTTTGGTACCTTTTTTCACTCTCTAAGCCTCTTAATTTTCGCTTTCTTTCACTCTGATGGACCG
AATCTCTATTGA
Protein sequenceShow/hide protein sequence
MNQESHRSNPPPLMVKPESQDRKPSSAAALSKKIVIKSADMFSDMQKEAIDIAIAAFEKHSVEKDVAELIKKEFDKNHGPTWHCIVGRNFGTFFHSLSLLIFAFFHSDGP
NLY