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Lsi05G015600 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G015600
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:23369462..23369725
RNA-Seq ExpressionLsi05G015600
SyntenyLsi05G015600
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049516.1 hypothetical protein E6C27_scaffold171G007700 [Cucumis melo var. makuwa]1.5e-3180.46Show/hide
Query:  MAARKDLIRKDLTRIGLEGFALIEEHYDRPRRRPRPVAPGQLQRVAAIQPPQRMVEPSPPIRCDQMAKAHGGIIIKEWGGKRVNKAL
        MAARKDL R DL RIG+E FALIEEHYDRPRRRPR V P   Q V AIQPP+RMVE SPPIRCDQ+AKAHGGIIIKEWGGKRVNK +
Subjt:  MAARKDLIRKDLTRIGLEGFALIEEHYDRPRRRPRPVAPGQLQRVAAIQPPQRMVEPSPPIRCDQMAKAHGGIIIKEWGGKRVNKAL

KAG6575082.1 hypothetical protein SDJN03_25721, partial [Cucurbita argyrosperma subsp. sororia]2.5e-0544.59Show/hide
Query:  RKDLTRIGLEGFALIEEHYDR--PRRRPRPVAPGQLQR-VAAIQPPQRMVEPSP-PIRCDQMAKAHGGIIIKEW
        R DL +IG EGF LI+E++ R    RRP    P   Q    A QPP++M E  P P+ C+Q+A+A GG++I  W
Subjt:  RKDLTRIGLEGFALIEEHYDR--PRRRPRPVAPGQLQR-VAAIQPPQRMVEPSP-PIRCDQMAKAHGGIIIKEW

KGN57134.1 hypothetical protein Csa_010351 [Cucumis sativus]1.0e-1463.51Show/hide
Query:  MAARKDLIRKDLTRIGLEGFALIEEHYDR--PRRRPRPVAPGQLQRVAAIQPPQRMVEPSPPIRCDQMAKAHGG
        MAA +DL R DL +IGLEGFALIEE Y +  P+RRPR VA    Q + AI PPQRM E SPPIRC+Q+AK H G
Subjt:  MAARKDLIRKDLTRIGLEGFALIEEHYDR--PRRRPRPVAPGQLQRVAAIQPPQRMVEPSPPIRCDQMAKAHGG

KGN57135.1 hypothetical protein Csa_010300 [Cucumis sativus]1.1e-2472.41Show/hide
Query:  MAARKDLIRKDLTRIGLEGFALIEEHYDRPRRRPRPVAPGQLQRVAAIQPPQRMVEPSPPIRCDQMAKAHGGIIIKEWGGKRVNKAL
        MAAR +    DL RIGLEGF  IEE YDRPRR+PR VAP   Q V AI PPQR VE SP IRCDQ+AKAHGGIIIKEWGGKRVNK +
Subjt:  MAARKDLIRKDLTRIGLEGFALIEEHYDRPRRRPRPVAPGQLQRVAAIQPPQRMVEPSPPIRCDQMAKAHGGIIIKEWGGKRVNKAL

TrEMBL top hitse value%identityAlignment
A0A0A0L5A8 Uncharacterized protein5.2e-2572.41Show/hide
Query:  MAARKDLIRKDLTRIGLEGFALIEEHYDRPRRRPRPVAPGQLQRVAAIQPPQRMVEPSPPIRCDQMAKAHGGIIIKEWGGKRVNKAL
        MAAR +    DL RIGLEGF  IEE YDRPRR+PR VAP   Q V AI PPQR VE SP IRCDQ+AKAHGGIIIKEWGGKRVNK +
Subjt:  MAARKDLIRKDLTRIGLEGFALIEEHYDRPRRRPRPVAPGQLQRVAAIQPPQRMVEPSPPIRCDQMAKAHGGIIIKEWGGKRVNKAL

A0A0A0L7Z0 Uncharacterized protein4.9e-1563.51Show/hide
Query:  MAARKDLIRKDLTRIGLEGFALIEEHYDR--PRRRPRPVAPGQLQRVAAIQPPQRMVEPSPPIRCDQMAKAHGG
        MAA +DL R DL +IGLEGFALIEE Y +  P+RRPR VA    Q + AI PPQRM E SPPIRC+Q+AK H G
Subjt:  MAARKDLIRKDLTRIGLEGFALIEEHYDR--PRRRPRPVAPGQLQRVAAIQPPQRMVEPSPPIRCDQMAKAHGG

A0A5A7U5Q5 Uncharacterized protein7.5e-3280.46Show/hide
Query:  MAARKDLIRKDLTRIGLEGFALIEEHYDRPRRRPRPVAPGQLQRVAAIQPPQRMVEPSPPIRCDQMAKAHGGIIIKEWGGKRVNKAL
        MAARKDL R DL RIG+E FALIEEHYDRPRRRPR V P   Q V AIQPP+RMVE SPPIRCDQ+AKAHGGIIIKEWGGKRVNK +
Subjt:  MAARKDLIRKDLTRIGLEGFALIEEHYDRPRRRPRPVAPGQLQRVAAIQPPQRMVEPSPPIRCDQMAKAHGGIIIKEWGGKRVNKAL

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAGCTCGTAAGGATCTAATTCGTAAAGATCTTACTAGGATTGGATTGGAAGGTTTTGCCCTTATAGAAGAACACTACGACCGACCAAGGAGGAGGCCGAGACCAGT
TGCTCCAGGTCAGCTGCAGCGAGTGGCAGCAATTCAACCTCCACAAAGGATGGTTGAGCCATCGCCGCCTATTCGTTGTGATCAGATGGCTAAAGCTCATGGAGGTATAA
TCATTAAAGAATGGGGTGGAAAGCGGGTCAACAAAGCTCTTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAGCTCGTAAGGATCTAATTCGTAAAGATCTTACTAGGATTGGATTGGAAGGTTTTGCCCTTATAGAAGAACACTACGACCGACCAAGGAGGAGGCCGAGACCAGT
TGCTCCAGGTCAGCTGCAGCGAGTGGCAGCAATTCAACCTCCACAAAGGATGGTTGAGCCATCGCCGCCTATTCGTTGTGATCAGATGGCTAAAGCTCATGGAGGTATAA
TCATTAAAGAATGGGGTGGAAAGCGGGTCAACAAAGCTCTTTGA
Protein sequenceShow/hide protein sequence
MAARKDLIRKDLTRIGLEGFALIEEHYDRPRRRPRPVAPGQLQRVAAIQPPQRMVEPSPPIRCDQMAKAHGGIIIKEWGGKRVNKAL