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Lsi05G016350 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G016350
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionEpidermal patterning factor-like protein
Genome locationchr05:24006136..24006518
RNA-Seq ExpressionLsi05G016350
SyntenyLsi05G016350
Gene Ontology termsGO:0010052 - guard cell differentiation (biological process)
GO:0005576 - extracellular region (cellular component)
InterPro domainsIPR039455 - EPIDERMAL PATTERNING FACTOR-like protein


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6597420.1 EPIDERMAL PATTERNING FACTOR-like protein 4, partial [Cucurbita argyrosperma subsp. sororia]1.2e-2764.95Show/hide
Query:  HPSNFYYHFSLLLT-LFAFAALLSHLVSASPETGVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP
        H  + + +FSLLLT L AFAA+  H  +A  ET  W +G   + +GPGSSPPTCR +CG+CWPC+PVHVPIQPG+S PLEYYPEAWRCKCG+KLFMP
Subjt:  HPSNFYYHFSLLLT-LFAFAALLSHLVSASPETGVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP

KGN56945.1 hypothetical protein Csa_009821 [Cucumis sativus]1.1e-3374.07Show/hide
Query:  MGS--LPLLHPSNFYYHFSLL-LTLFAF--AALLSHLVSASPETGVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCK
        MGS  LP  HPS+F  HFSLL LTLFAF  A+  S   S+S ETG W +GD+KSLVGPGSSPPTC  KCG+C PCEPVHVPIQPGLS PLEYYPEAWRCK
Subjt:  MGS--LPLLHPSNFYYHFSLL-LTLFAF--AALLSHLVSASPETGVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCK

Query:  CGDKLFMP
        CG+KLFMP
Subjt:  CGDKLFMP

XP_008438622.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Cucumis melo]1.3e-3269.3Show/hide
Query:  MGS--LPLLHPSNFYYHFSLL-LTLFAF--------AALLSHLVSASPETGVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYP
        MGS  LP  HPS+F  HFSLL LTLFAF        ++  S   S+S ETG W +GD+KSLVGPGSSPPTC  KCG+C PCEPVHVPIQPGLS PLEYYP
Subjt:  MGS--LPLLHPSNFYYHFSLL-LTLFAF--------AALLSHLVSASPETGVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYP

Query:  EAWRCKCGDKLFMP
        EAWRCKCG+KLFMP
Subjt:  EAWRCKCGDKLFMP

XP_010435079.1 PREDICTED: EPIDERMAL PATTERNING FACTOR-like protein 4 [Camelina sativa]7.4e-2562.24Show/hide
Query:  LLLTLFAFAALLSHLVSASPETGVWV------------VGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP
        LL  L AFA L  HL S S + G W+            +GD K   GPGSSPPTCR KCG+C PC+PVHVPIQPGLS PLEYYPEAWRCKCG K+FMP
Subjt:  LLLTLFAFAALLSHLVSASPETGVWV------------VGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP

XP_038905188.1 EPIDERMAL PATTERNING FACTOR-like protein 4 [Benincasa hispida]2.0e-3880Show/hide
Query:  PSNFYYHFSLLLTLFAFAALLSHLVSASPETGVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP
        PSN+YYHFSLLL LF   AL   LVSASPE+G W +GD+KSLVGPGS PPTCR KCG+C PCEPVHVPIQPGLS PLEYYPEAWRCKCG+KLFMP
Subjt:  PSNFYYHFSLLLTLFAFAALLSHLVSASPETGVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP

TrEMBL top hitse value%identityAlignment
A0A0A0L4P0 Epidermal patterning factor-like protein5.5e-3474.07Show/hide
Query:  MGS--LPLLHPSNFYYHFSLL-LTLFAF--AALLSHLVSASPETGVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCK
        MGS  LP  HPS+F  HFSLL LTLFAF  A+  S   S+S ETG W +GD+KSLVGPGSSPPTC  KCG+C PCEPVHVPIQPGLS PLEYYPEAWRCK
Subjt:  MGS--LPLLHPSNFYYHFSLL-LTLFAF--AALLSHLVSASPETGVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCK

Query:  CGDKLFMP
        CG+KLFMP
Subjt:  CGDKLFMP

A0A0E0CVJ3 Epidermal patterning factor-like protein1.4e-2467.95Show/hide
Query:  AALLSHLVSASPETGVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP
        AA+   +  +S E+ V  V  ++ LVGPGSSPPTCR +CG C PC PVHV IQPG SFPLEYYPEAWRCKCGDKLFMP
Subjt:  AALLSHLVSASPETGVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP

A0A1S3AWH2 Epidermal patterning factor-like protein6.1e-3369.3Show/hide
Query:  MGS--LPLLHPSNFYYHFSLL-LTLFAF--------AALLSHLVSASPETGVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYP
        MGS  LP  HPS+F  HFSLL LTLFAF        ++  S   S+S ETG W +GD+KSLVGPGSSPPTC  KCG+C PCEPVHVPIQPGLS PLEYYP
Subjt:  MGS--LPLLHPSNFYYHFSLL-LTLFAF--------AALLSHLVSASPETGVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYP

Query:  EAWRCKCGDKLFMP
        EAWRCKCG+KLFMP
Subjt:  EAWRCKCGDKLFMP

A0A6D2KFV2 Epidermal patterning factor-like protein6.1e-2562.14Show/hide
Query:  HFSLLLTLFAFAALLSHLVSASP--ETGVWV------------VGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKL
        H  LL +L AFA L  HLVSA+    TG W+            + DK+   GPGSSPPTCR KCGKC PC+PVHVPIQPG+S PLEYYPEAWRCKCG+KL
Subjt:  HFSLLLTLFAFAALLSHLVSASP--ETGVWV------------VGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKL

Query:  FMP
        FMP
Subjt:  FMP

D7MGX0 Epidermal patterning factor-like protein1.4e-2462.5Show/hide
Query:  HFSLLLTLFAFAALLSHLVSAS---PETGVWV------------VGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDK
        HF LL +L AFA L  HL SAS      G W+            V + K   GPGSSPPTCR KCGKC PC+PVHVPIQPGLS PLEYYPEAWRCKCG K
Subjt:  HFSLLLTLFAFAALLSHLVSAS---PETGVWV------------VGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDK

Query:  LFMP
        LFMP
Subjt:  LFMP

SwissProt top hitse value%identityAlignment
Q1PEY6 EPIDERMAL PATTERNING FACTOR-like protein 64.8e-1964.91Show/hide
Query:  KKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP
        ++ L G GSSPP C  KCG+C PC+PVHVP+ PG     EYYPEAWRCKCG+KL+MP
Subjt:  KKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP

Q2V3I3 EPIDERMAL PATTERNING FACTOR-like protein 42.4e-2660.4Show/hide
Query:  LLLTLFAFAALLSHLVSAS---PETGVWV------------VGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFM
        LL  L  FA L  HL SAS      G W+            +   K   GPGSSPPTCR KCGKC PC+PVHVPIQPGLS PLEYYPEAWRCKCG+KLFM
Subjt:  LLLTLFAFAALLSHLVSAS---PETGVWV------------VGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFM

Query:  P
        P
Subjt:  P

Q7M1E7 Polygalacturonase1.5e-0737.5Show/hide
Query:  GVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP
        G    GD  + +   SSPP C+ KC  C PC+P  + + P  + P +YYP+ W C C +K++ P
Subjt:  GVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP

Q9FY19 Polygalacturonase8.6e-0839.66Show/hide
Query:  DKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP
        D+K      SSPP C+ KC  C PC+P  + + P  + P +YYP+ W C C +K++ P
Subjt:  DKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP

Q9LUH9 EPIDERMAL PATTERNING FACTOR-like protein 53.8e-2479.31Show/hide
Query:  DKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP
        D+K L GPGS PP CR KCGKC PC+ VHVPIQPGL  PLEYYPEAWRCKCG+KLFMP
Subjt:  DKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP

Arabidopsis top hitse value%identityAlignment
AT1G80133.1 unknown protein8.2e-0639.62Show/hide
Query:  GSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLE---YYPEAWRCKCGDKLFMP
        GS PP C  KC  C PC P    I+       +   YYP  W C+C D++F P
Subjt:  GSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLE---YYPEAWRCKCGDKLFMP

AT2G30370.1 allergen-related3.4e-2064.91Show/hide
Query:  KKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP
        ++ L G GSSPP C  KCG+C PC+PVHVP+ PG     EYYPEAWRCKCG+KL+MP
Subjt:  KKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP

AT2G30370.2 allergen-related3.4e-2064.91Show/hide
Query:  KKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP
        ++ L G GSSPP C  KCG+C PC+PVHVP+ PG     EYYPEAWRCKCG+KL+MP
Subjt:  KKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP

AT3G22820.1 allergen-related2.7e-2579.31Show/hide
Query:  DKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP
        D+K L GPGS PP CR KCGKC PC+ VHVPIQPGL  PLEYYPEAWRCKCG+KLFMP
Subjt:  DKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP

AT4G14723.1 BEST Arabidopsis thaliana protein match is: allergen-related (TAIR:AT3G22820.1)1.7e-2760.4Show/hide
Query:  LLLTLFAFAALLSHLVSAS---PETGVWV------------VGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFM
        LL  L  FA L  HL SAS      G W+            +   K   GPGSSPPTCR KCGKC PC+PVHVPIQPGLS PLEYYPEAWRCKCG+KLFM
Subjt:  LLLTLFAFAALLSHLVSAS---PETGVWV------------VGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFM

Query:  P
        P
Subjt:  P


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGATCACTACCCCTTCTTCATCCATCCAATTTTTATTACCATTTCTCTCTTCTTCTCACTCTCTTCGCCTTCGCCGCTTTACTCTCTCACCTTGTCTCCGCCTCTCC
AGAAACCGGAGTCTGGGTTGTCGGGGATAAGAAGAGCTTGGTTGGACCGGGATCCTCGCCGCCGACCTGTCGATTTAAGTGTGGGAAATGCTGGCCTTGTGAACCGGTTC
ATGTTCCAATTCAACCGGGTTTGAGTTTTCCATTGGAGTATTACCCTGAAGCTTGGAGATGCAAATGTGGGGATAAGCTGTTTATGCCTTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGATCACTACCCCTTCTTCATCCATCCAATTTTTATTACCATTTCTCTCTTCTTCTCACTCTCTTCGCCTTCGCCGCTTTACTCTCTCACCTTGTCTCCGCCTCTCC
AGAAACCGGAGTCTGGGTTGTCGGGGATAAGAAGAGCTTGGTTGGACCGGGATCCTCGCCGCCGACCTGTCGATTTAAGTGTGGGAAATGCTGGCCTTGTGAACCGGTTC
ATGTTCCAATTCAACCGGGTTTGAGTTTTCCATTGGAGTATTACCCTGAAGCTTGGAGATGCAAATGTGGGGATAAGCTGTTTATGCCTTGA
Protein sequenceShow/hide protein sequence
MGSLPLLHPSNFYYHFSLLLTLFAFAALLSHLVSASPETGVWVVGDKKSLVGPGSSPPTCRFKCGKCWPCEPVHVPIQPGLSFPLEYYPEAWRCKCGDKLFMP