; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G016680 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G016680
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionDNA-directed RNA polymerase V subunit 7-like
Genome locationchr05:24315404..24320472
RNA-Seq ExpressionLsi05G016680
SyntenyLsi05G016680
Gene Ontology termsGO:0006352 - DNA-templated transcription, initiation (biological process)
GO:0003697 - single-stranded DNA binding (molecular function)
GO:0003727 - single-stranded RNA binding (molecular function)
GO:0003899 - DNA-directed 5'-3' RNA polymerase activity (molecular function)
InterPro domainsIPR012340 - Nucleic acid-binding, OB-fold
IPR036898 - RNA polymerase Rpb7-like, N-terminal domain superfamily
IPR045113 - RNA polymerase Rpb7-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAG6582352.1 DNA-directed RNA polymerase subunit 7-like protein, partial [Cucurbita argyrosperma subsp. sororia]1.5e-9588.29Show/hide
Query:  SAIFVRIFIFIWEMFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFSCRTFLPFE
        S +F+ ++  IWEMF EVELVRDVE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGYFLAVTSLKSIGKG VKN  ESQCVSFPITFSCRTFLP E
Subjt:  SAIFVRIFIFIWEMFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFSCRTFLPFE

Query:  GEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDS
        GEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDS
Subjt:  GEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDS

Query:  DEFDL
        DEFDL
Subjt:  DEFDL

XP_004134101.1 DNA-directed RNA polymerase V subunit 7 [Cucumis sativus]1.6e-10096.32Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFL+VTSL+SIGKG+VKNESQCVSFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKYVFLSARKMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

XP_008438585.1 PREDICTED: DNA-directed RNA polymerase V subunit 7-like [Cucumis melo]1.6e-10096.84Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFL+VTSLKSIGKGVVKNESQCVSFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKY FLSARKMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

XP_038877102.1 DNA-directed RNA polymerase V subunit 7-like isoform X1 [Benincasa hispida]8.7e-9978.4Show/hide
Query:  PMHNIPTLPNARPFSFLYFFPILAAAAPPLLLLLRRSSFFLLRITIHSAIFVRIFIFIWEMFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKE
        P H+IPTLPNA  F   +F      + PPL      SS       +H +             Y VELV+DVEIT EKEKRDA NFQRYIITCLLENLLKE
Subjt:  PMHNIPTLPNARPFSFLYFFPILAAAAPPLLLLLRRSSFFLLRITIHSAIFVRIFIFIWEMFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKE

Query:  KANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIG
        KANKDHGYFLAVTSLKSIGKGVV ++SQCVSFPITFSCRTFLPFEGEILHGVV HIFRRGLLLKCGPIKYVFLSA KMPTYHYVGGENPVFSSNEFATIG
Subjt:  KANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIG

Query:  NDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        NDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  NDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

XP_038877103.1 DNA-directed RNA polymerase V subunit 7-like isoform X2 [Benincasa hispida]4.2e-10194.47Show/hide
Query:  FIF---IWEMFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHG
        FIF   IWEMFYEVELV+DVEIT EKEKRDA NFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVV ++SQCVSFPITFSCRTFLPFEGEILHG
Subjt:  FIF---IWEMFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHG

Query:  VVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        VV HIFRRGLLLKCGPIKYVFLSA KMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  VVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

TrEMBL top hitse value%identityAlignment
A0A0A0L5A3 Uncharacterized protein7.7e-10196.32Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFL+VTSL+SIGKG+VKNESQCVSFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKYVFLSARKMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A1S3AWE2 DNA-directed RNA polymerase V subunit 7-like7.7e-10196.84Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFL+VTSLKSIGKGVVKNESQCVSFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKY FLSARKMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A5A7U0C3 DNA-directed RNA polymerase V subunit 7-like7.7e-10196.84Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFL+VTSLKSIGKGVVKNESQCVSFPITF CRTFLPFEGEILHGVVRHIF+RG
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        LLLKCGPIKY FLSARKMPTY YVGGENPVFSS EFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A6J1EFY9 DNA-directed RNA polymerase V subunit 7-like9.1e-9491.67Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFSCRTFLPFEGEILHGVVRHIFR
        MF EVELVRDVE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGYFLAVTSLKSIGKG VKN  ESQCVSFPITFSCRTFLP EGEILHGVVRHIFR
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFSCRTFLPFEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCIKKEFVMLASLEGN SLGPIS SDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

A0A6J1IQI7 DNA-directed RNA polymerase V subunit 7-like isoform X12.2e-9290.62Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFSCRTFLPFEGEILHGVVRHIFR
        MF EVELVR+VE+TVEKEKRD  N QRYIITCLLENLLKEKA+KDHGYFLAVTSLKSIGK  VKN  ESQCVSFPITFSCRTFLP EGEILHGVVRHIFR
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN--ESQCVSFPITFSCRTFLPFEGEILHGVVRHIFR

Query:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL
        RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSS + ATIGNDVVVRFSVLGVRW+EKRGCI KEFVMLASLEGN SLGPISLSDSDEFDL
Subjt:  RGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDEFDL

SwissProt top hitse value%identityAlignment
A6QRA1 DNA-directed RNA polymerase V subunit 72.7e-3441.99Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  +V I  E         +R I+  LLE    +KA K+ GY++AVT+L  IG+G ++  +  V FP+ FS  TF  F+GEI+HGVV  + + G
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS
        + ++CGPI+ V+LS  KMP Y Y+ GENP+F + + + I  +  VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS

P38421 DNA-directed RNA polymerase II subunit 74.4e-1325.81Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF+ + L R++++     +    N +  +++ L+++ ++   +  HG+ +A+T + +IGKG++++ +  V+FP+ + C  F PF+GEIL  VV  + + G
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMP-TYHYVGGENPVFSSNEFAT-IGNDVVVRFSVLGVR
           + GP++ +F+S   +P    +  G+ P +++++ +  I  +  VR  ++G R
Subjt:  LLLKCGPIKYVFLSARKMP-TYHYVGGENPVFSSNEFAT-IGNDVVVRFSVLGVR

P46279 DNA-directed RNA polymerase II subunit RPB78.9e-1428.48Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKE---KANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIF
        MF+ + L R++++           F R +   L+  L+K+     +  HG+ +AVT +++IGKG++++ +  V+FP+ + C  F PF+GEIL  VV  + 
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKE---KANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIF

Query:  RRGLLLKCGPIKYVFLSARKMP-TYHYVGGENPVFSSNEFAT-IGNDVVVRFSVLGVR
        + G   + GP++ +F+S   +P    +  G+ P +++++ +  I  D  VR  ++G R
Subjt:  RRGLLLKCGPIKYVFLSARKMP-TYHYVGGENPVFSSNEFAT-IGNDVVVRFSVLGVR

Q6NML5 DNA-directed RNA polymerase subunit 7-like protein1.3e-3641.21Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV I    +  +  +  + I+  LL++L+ EKA ++HG++L +T+LKSIG     N       +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

Q8LE42 DNA-directed RNA polymerase IV subunit 71.2e-2941.34Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  DV I  E +       QR I+  LLE   KEKA KD GY +  T L++IG+G +K ++  + FP+ F+   F  F+GEI+HGVV  + + G
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP
        + LK GP + ++LS  KMP Y ++ GENP F +   + I     VRF VL   W E     +K+F+ LAS++G+N LGP
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP

Arabidopsis top hitse value%identityAlignment
AT3G22900.1 RNA polymerase Rpb7-like, N-terminal domain8.3e-3141.34Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  DV I  E +       QR I+  LLE   KEKA KD GY +  T L++IG+G +K ++  + FP+ F+   F  F+GEI+HGVV  + + G
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP
        + LK GP + ++LS  KMP Y ++ GENP F +   + I     VRF VL   W E     +K+F+ LAS++G+N LGP
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGP

AT4G14520.1 DNA-directed RNA polymerase II-related9.1e-3841.21Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV I    +  +  +  + I+  LL++L+ EKA ++HG++L +T+LKSIG     N       +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

AT4G14520.2 DNA-directed RNA polymerase II-related9.1e-3841.21Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV I    +  +  +  + I+  LL++L+ EKA ++HG++L +T+LKSIG     N       +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

AT4G14520.3 DNA-directed RNA polymerase II-related9.1e-3841.21Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV
        MF EVE+ RDV I    +  +  +  + I+  LL++L+ EKA ++HG++L +T+LKSIG     N       +++ ++FP++F+CRTFLP  G+IL G V
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKN-------ESQCVSFPITFSCRTFLPFEGEILHGVV

Query:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE
        + +   G  ++ GP++Y +LS  KMP YHYV       E P F  ++ + I   VVVRF VL VR+ E+    + ++ +LA+LEGN S GPISL+ SDE
Subjt:  RHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGG-----ENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDSDE

AT4G14660.1 RNA polymerase Rpb7-like, N-terminal domain1.9e-3541.99Show/hide
Query:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG
        MF +V+L  +V I  E         +R I+  LLE    +KA K+ GY++AVT+L  IG+G ++  +  V FP+ FS  TF  F+GEI+HGVV  + + G
Subjt:  MFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPITFSCRTFLPFEGEILHGVVRHIFRRG

Query:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS
        + ++CGPI+ V+LS  KMP Y Y+ GENP+F + + + I  +  VR  V+G++W+E    +++EF  LASLEG + LGP+S
Subjt:  LLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPIS


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAAGTCCGTGGCGATGGCGGGAAAATACGTATAGGCCCGAAAACCATTCCAGTTAGCCGCCACGAAGCCGTCGCCGTCGAAAGAGGTGACCGTTTGATGTCGCCGCC
TGAGAACGCTGCTTGCAAAATCTACACGTCATTGATCATATCGGAGAAGGGACGAAAAGTAAGCATCGGAGCAGCTTCCATTTTCCAAGATCCATATTTTGCTTTTTTAA
AAATGGCAAAGCCATCCGCCTTTACTTTATCCACTCCAATGCACAACATCCCAACACTTCCTAATGCCCGCCCATTTTCATTTCTCTATTTCTTCCCAATTCTCGCCGCC
GCCGCCCCCCCTCTCCTCCTCCTCCTCCGCCGCTCTTCATTTTTCCTACTCAGAATCACCATCCACTCTGCTATATTTGTTAGAATTTTCATTTTCATCTGGGAAATGTT
TTATGAAGTGGAACTGGTGAGAGATGTGGAAATCACGGTGGAAAAGGAAAAGAGAGATGCTCACAACTTTCAGAGGTACATTATAACATGTCTATTAGAAAACTTATTGA
AGGAGAAGGCCAACAAAGACCATGGCTATTTTCTTGCTGTTACTAGCTTGAAGAGCATAGGCAAGGGAGTGGTTAAGAATGAGTCTCAATGTGTTTCATTCCCCATTACC
TTTAGTTGCCGAACCTTTTTGCCTTTCGAGGGGGAGATCTTGCATGGAGTTGTTCGTCACATATTTCGGCGTGGATTACTCTTAAAATGTGGACCGATCAAGTACGTATT
TCTTTCAGCTCGGAAAATGCCAACCTACCATTATGTTGGTGGTGAAAATCCTGTATTCTCAAGCAACGAATTTGCAACGATTGGAAACGATGTCGTTGTACGGTTCAGTG
TGCTTGGTGTGAGATGGATAGAGAAAAGAGGATGTATCAAAAAAGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACAACTCACTTGGACCTATTTCATTGTCTGACTCC
GATGAGTTTGACTTGTAA
mRNA sequenceShow/hide mRNA sequence
ATGGAAGTCCGTGGCGATGGCGGGAAAATACGTATAGGCCCGAAAACCATTCCAGTTAGCCGCCACGAAGCCGTCGCCGTCGAAAGAGGTGACCGTTTGATGTCGCCGCC
TGAGAACGCTGCTTGCAAAATCTACACGTCATTGATCATATCGGAGAAGGGACGAAAAGTAAGCATCGGAGCAGCTTCCATTTTCCAAGATCCATATTTTGCTTTTTTAA
AAATGGCAAAGCCATCCGCCTTTACTTTATCCACTCCAATGCACAACATCCCAACACTTCCTAATGCCCGCCCATTTTCATTTCTCTATTTCTTCCCAATTCTCGCCGCC
GCCGCCCCCCCTCTCCTCCTCCTCCTCCGCCGCTCTTCATTTTTCCTACTCAGAATCACCATCCACTCTGCTATATTTGTTAGAATTTTCATTTTCATCTGGGAAATGTT
TTATGAAGTGGAACTGGTGAGAGATGTGGAAATCACGGTGGAAAAGGAAAAGAGAGATGCTCACAACTTTCAGAGGTACATTATAACATGTCTATTAGAAAACTTATTGA
AGGAGAAGGCCAACAAAGACCATGGCTATTTTCTTGCTGTTACTAGCTTGAAGAGCATAGGCAAGGGAGTGGTTAAGAATGAGTCTCAATGTGTTTCATTCCCCATTACC
TTTAGTTGCCGAACCTTTTTGCCTTTCGAGGGGGAGATCTTGCATGGAGTTGTTCGTCACATATTTCGGCGTGGATTACTCTTAAAATGTGGACCGATCAAGTACGTATT
TCTTTCAGCTCGGAAAATGCCAACCTACCATTATGTTGGTGGTGAAAATCCTGTATTCTCAAGCAACGAATTTGCAACGATTGGAAACGATGTCGTTGTACGGTTCAGTG
TGCTTGGTGTGAGATGGATAGAGAAAAGAGGATGTATCAAAAAAGAGTTTGTGATGCTTGCTAGCTTAGAAGGTAACAACTCACTTGGACCTATTTCATTGTCTGACTCC
GATGAGTTTGACTTGTAAATTTAGAATACAAACCACAAACTTGGGAATGTTCCACTGTAATATATTCTTACACGGCTTGCTTATTTCTTCCCTTCTATATCTTTCTGTTT
GATGTTCTTTTTGGCCATGATAATTCAAGAGTCTTGTGGAATGTTAATTTGAGTGTCTTGCATTTAAGGACATCCGAGGGCAGGATGGATTGGATTTTAGTTAAGAGAGT
AGATATTTGCAAAATAACAGTATCGTTCAATTGAAATTATCCCAACTCAAGGTTTGGATTTTTTTTAATTTGGTATTTAAGGTCTTAACAGAGTGGATGTTTGCAATGTT
CTACTTCTAAAGTCAATTGTCTGAAGGACAAAACCGAGAGAGGGAGAGAGAAGTTCTGTAGGTTTCAAGATGATGCCATGTTTCCAAGCACTGCTACGGATGTCTTTGTT
TTACAAATTACAATCAATCCATTTGTTGTTGTTTTCATTGATTCAAATAGTAATGGGTTGTTGAGATCCACCCTATAGATTAGGAGTTAATCTATGTTCAAGTTGGCTAA
ATTGATTATGTTAGTAAAAATGTTTCATTATTGGTCAAAAGAAGATAAAAGAGTTTTTTTAGAGTTGTCTTGATTTCGAATAAAGAATAATTTTAGGCTTTGTTA
Protein sequenceShow/hide protein sequence
MEVRGDGGKIRIGPKTIPVSRHEAVAVERGDRLMSPPENAACKIYTSLIISEKGRKVSIGAASIFQDPYFAFLKMAKPSAFTLSTPMHNIPTLPNARPFSFLYFFPILAA
AAPPLLLLLRRSSFFLLRITIHSAIFVRIFIFIWEMFYEVELVRDVEITVEKEKRDAHNFQRYIITCLLENLLKEKANKDHGYFLAVTSLKSIGKGVVKNESQCVSFPIT
FSCRTFLPFEGEILHGVVRHIFRRGLLLKCGPIKYVFLSARKMPTYHYVGGENPVFSSNEFATIGNDVVVRFSVLGVRWIEKRGCIKKEFVMLASLEGNNSLGPISLSDS
DEFDL