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Lsi05G016830 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G016830
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
Descriptionzf-RVT domain-containing protein
Genome locationchr05:24390996..24392711
RNA-Seq ExpressionLsi05G016830
SyntenyLsi05G016830
Gene Ontology termsGO:0090305 - nucleic acid phosphodiester bond hydrolysis (biological process)
GO:0016021 - integral component of membrane (cellular component)
GO:0004519 - endonuclease activity (molecular function)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
GER36588.1 solute carrier family 2 [Striga asiatica]2.9e-1270.31Show/hide
Query:  MVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKP
        MV T VLPVST FLT  +T+AAALAS P VGSSM +IEGL T+STA+V+L  CSV+ PLTPGKP
Subjt:  MVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKP

KAF4355008.1 hypothetical protein G4B88_008483 [Cannabis sativa]8.2e-3171.7Show/hide
Query:  VQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKPPILISPSMYPLVFRPARTSSRVVFPAPLTPINAVRTP
        V T ++ VS TF TA MT+AA LASKPVVGSS+K+++G +TSSTA+V+ LRCS ++PLTPG PPI ISPSMYP+VF PARTSS+VVFPAPLTPINAVRTP
Subjt:  VQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKPPILISPSMYPLVFRPARTSSRVVFPAPLTPINAVRTP

Query:  GLKAPV
        GL  P+
Subjt:  GLKAPV

KAF7817222.1 Coatomer subunit beta-1 [Senna tora]5.7e-1656.84Show/hide
Query:  MSILGWWMVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKPPILISPSMYPLVFRPARTSSRVVF
        +SILGWW+VQT V PVST FLT  +T+AAALAS+P VGSSM +I+G  TSSTA+V+LLRCSV+ P++PG P    S S+  L    + TSS  ++
Subjt:  MSILGWWMVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKPPILISPSMYPLVFRPARTSSRVVF

PKA53769.1 hypothetical protein AXF42_Ash020690 [Apostasia shenzhenica]4.4e-1671.01Show/hide
Query:  ILGWWMVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKP
        +LGWW+V T VLPV T FLT  +T+AAALAS P VGSSM +IEGL TSSTA+VNLLRCS+DKP  PG P
Subjt:  ILGWWMVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKP

PKU77890.1 hypothetical protein MA16_Dca005722 [Dendrobium catenatum]9.7e-1672.46Show/hide
Query:  ILGWWMVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKP
        +LGW +V T VLPVST FLT  +TMAAALAS P VGSS+ +IEGL TSSTA+VNL RCSVDKP TPG P
Subjt:  ILGWWMVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKP

TrEMBL top hitse value%identityAlignment
A0A0A9IW72 PDR81.2e-1670.42Show/hide
Query:  MSILGWWMVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKP
        MS+LGWW+VQT V PVST F T  MT+AAALAS+P VGSSMKMI+GL TSSTA+VNL  CSV+ P+ PG P
Subjt:  MSILGWWMVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKP

A0A0A9J2I1 Similar to PDR8/PEN3 (PLEIOTROPIC DRUG RESISTANCE8)7.3e-1770.42Show/hide
Query:  MSILGWWMVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKP
        MS+LGWW+VQT V PVST F T  MT+AAALAS+P VGSSMKMI+GL TSSTA+VNL  CSV+ P+ PG+P
Subjt:  MSILGWWMVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKP

A0A0A9JC22 Similar to PDR8/PEN3 (PLEIOTROPIC DRUG RESISTANCE8)4.3e-1771.83Show/hide
Query:  MSILGWWMVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKP
        MS+LGWW+VQT V PVST F T  MT+AAALAS+P VGSSMKMIEGL TSSTA+V+L  CSVD P+ PG+P
Subjt:  MSILGWWMVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKP

A0A0A9NJV1 Uncharacterized protein1.6e-1673.61Show/hide
Query:  QMSILGWWMVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKP
        ++S+LGW MVQT V PVST FL A MTMAAA AS P VGSSMKMIEGL TSSTA+V+L  CSVD PLTPG P
Subjt:  QMSILGWWMVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKP

A0A7J6E9B3 zf-RVT domain-containing protein4.0e-3171.7Show/hide
Query:  VQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKPPILISPSMYPLVFRPARTSSRVVFPAPLTPINAVRTP
        V T ++ VS TF TA MT+AA LASKPVVGSS+K+++G +TSSTA+V+ LRCS ++PLTPG PPI ISPSMYP+VF PARTSS+VVFPAPLTPINAVRTP
Subjt:  VQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKPPILISPSMYPLVFRPARTSSRVVFPAPLTPINAVRTP

Query:  GLKAPV
        GL  P+
Subjt:  GLKAPV

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGAGCAAATGTCGATACTCGGCTGGTGGATGGTACAAACTATTGTTCTTCCAGTATCAACCACATTCTTAACTGCTCGCATGACAATGGCAGCTGCTCTTGCATCCAA
ACCAGTGGTAGGCTCATCCATGAAGATGATAGAAGGATTGAAAACAAGCTCTACAGCTATGGTTAACCTTTTACGCTGCTCGGTCGATAAACCACTAACACCAGGAAAAC
CACCAATTTTGATTTCTCCTTCAATGTATCCGCTCGTTTTTCGTCCGGCAAGAACATCAAGCAGAGTTGTTTTTCCAGCTCCACTGACACCCATTAATGCTGTGAGGACA
CCAGGCCTTAAGGCCCCTGTTATATCAGAAAGGAGCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGAGCAAATGTCGATACTCGGCTGGTGGATGGTACAAACTATTGTTCTTCCAGTATCAACCACATTCTTAACTGCTCGCATGACAATGGCAGCTGCTCTTGCATCCAA
ACCAGTGGTAGGCTCATCCATGAAGATGATAGAAGGATTGAAAACAAGCTCTACAGCTATGGTTAACCTTTTACGCTGCTCGGTCGATAAACCACTAACACCAGGAAAAC
CACCAATTTTGATTTCTCCTTCAATGTATCCGCTCGTTTTTCGTCCGGCAAGAACATCAAGCAGAGTTGTTTTTCCAGCTCCACTGACACCCATTAATGCTGTGAGGACA
CCAGGCCTTAAGGCCCCTGTTATATCAGAAAGGAGCTGA
Protein sequenceShow/hide protein sequence
MEQMSILGWWMVQTIVLPVSTTFLTARMTMAAALASKPVVGSSMKMIEGLKTSSTAMVNLLRCSVDKPLTPGKPPILISPSMYPLVFRPARTSSRVVFPAPLTPINAVRT
PGLKAPVISERS