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Lsi05G016880 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G016880
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:24444106..24444384
RNA-Seq ExpressionLsi05G016880
SyntenyLsi05G016880
Gene Ontology termsGO:0016021 - integral component of membrane (cellular component)
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049291.1 putative transmembrane protein [Cucumis melo var. makuwa]1.3e-3687.23Show/hide
Query:  MAILLLLQLQPNFAGRTLHEKPPMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTHRRHAAPVRAVDALV
        MAILLLLQLQPN AGRTLHEKPPMVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A R+TR PSTHRRHAAP R V ALV
Subjt:  MAILLLLQLQPNFAGRTLHEKPPMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTHRRHAAPVRAVDALV

KAG6597386.1 hypothetical protein SDJN03_10566, partial [Cucurbita argyrosperma subsp. sororia]2.7e-2669.79Show/hide
Query:  ILLLLQLQPNFAGRTLHEKPPMVRGTE------LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTHRRHAAPVRAVDALV
        IL+LLQL PN AGRTL EKP MVR  E      LKLQSLQRV VPPSGPSGCTFIPGTNGPGCPL+ RHYA + + + PST RR+A PVR V+AL+
Subjt:  ILLLLQLQPNFAGRTLHEKPPMVRGTE------LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTHRRHAAPVRAVDALV

KAG7018772.1 hypothetical protein SDJN02_20645, partial [Cucurbita argyrosperma subsp. argyrosperma]2.4e-2275.68Show/hide
Query:  LQPNFAGRTLHEKPPMVRGTE----LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTH
        L PN AGRTLHE P MVR TE    LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCP K RHY  + +TR PS H
Subjt:  LQPNFAGRTLHEKPPMVRGTE----LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTH

KGN56901.1 hypothetical protein Csa_009866 [Cucumis sativus]3.9e-3381.52Show/hide
Query:  ILLLLQLQPNFAGRTLHEKPPMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTHRRHAAPVRAVDALV
        +LLLLQLQPN AGRTLHEKPPMVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A+ +T+ PSTHRR+AAP R V  LV
Subjt:  ILLLLQLQPNFAGRTLHEKPPMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTHRRHAAPVRAVDALV

TYK17267.1 putative transmembrane protein [Cucumis melo var. makuwa]1.3e-3687.23Show/hide
Query:  MAILLLLQLQPNFAGRTLHEKPPMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTHRRHAAPVRAVDALV
        MAILLLLQLQPN AGRTLHEKPPMVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A R+TR PSTHRRHAAP R V ALV
Subjt:  MAILLLLQLQPNFAGRTLHEKPPMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTHRRHAAPVRAVDALV

TrEMBL top hitse value%identityAlignment
A0A0A0LA00 Uncharacterized protein1.9e-3381.52Show/hide
Query:  ILLLLQLQPNFAGRTLHEKPPMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTHRRHAAPVRAVDALV
        +LLLLQLQPN AGRTLHEKPPMVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A+ +T+ PSTHRR+AAP R V  LV
Subjt:  ILLLLQLQPNFAGRTLHEKPPMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTHRRHAAPVRAVDALV

A0A5A7U6N3 Putative transmembrane protein6.2e-3787.23Show/hide
Query:  MAILLLLQLQPNFAGRTLHEKPPMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTHRRHAAPVRAVDALV
        MAILLLLQLQPN AGRTLHEKPPMVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A R+TR PSTHRRHAAP R V ALV
Subjt:  MAILLLLQLQPNFAGRTLHEKPPMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTHRRHAAPVRAVDALV

A0A5D3CZY7 Putative transmembrane protein6.2e-3787.23Show/hide
Query:  MAILLLLQLQPNFAGRTLHEKPPMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTHRRHAAPVRAVDALV
        MAILLLLQLQPN AGRTLHEKPPMVR  E  LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHY A R+TR PSTHRRHAAP R V ALV
Subjt:  MAILLLLQLQPNFAGRTLHEKPPMVRGTE--LKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTHRRHAAPVRAVDALV

A0A5N6QYI5 Uncharacterized protein1.7e-1052.05Show/hide
Query:  MAILLLLQLQPNFAGRTLHEKPPMVRGTELKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTR
        + +L LL +Q   A R LH +       +++LQSLQR  VPPSG SGCT+IPGT GPGCP+KE +YA D   R
Subjt:  MAILLLLQLQPNFAGRTLHEKPPMVRGTELKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTR

A0A5N6R1J5 Uncharacterized protein2.0e-1153.42Show/hide
Query:  MAILLLLQLQPNFAGRTLHEKPPMVRGTELKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTR
        + +L LL +Q   A R LH +       +++LQSLQR +VPPSG SGCT+IPGT GPGCP+KE HYA D   R
Subjt:  MAILLLLQLQPNFAGRTLHEKPPMVRGTELKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTR

SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCAATCCTTCTTCTGTTGCAGCTTCAGCCAAACTTTGCTGGTAGGACTTTGCATGAGAAGCCACCTATGGTGAGAGGAACGGAGCTGAAGCTGCAGTCTCTTCAGAG
AGTCAGTGTACCGCCCTCTGGCCCCTCCGGTTGCACCTTCATTCCCGGCACCAACGGCCCCGGCTGTCCCCTAAAAGAGAGACACTATGCTGCCGACCGTACCACACGAC
ATCCAAGCACTCACCGACGCCATGCAGCCCCTGTTCGTGCCGTGGATGCTCTCGTCTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCAATCCTTCTTCTGTTGCAGCTTCAGCCAAACTTTGCTGGTAGGACTTTGCATGAGAAGCCACCTATGGTGAGAGGAACGGAGCTGAAGCTGCAGTCTCTTCAGAG
AGTCAGTGTACCGCCCTCTGGCCCCTCCGGTTGCACCTTCATTCCCGGCACCAACGGCCCCGGCTGTCCCCTAAAAGAGAGACACTATGCTGCCGACCGTACCACACGAC
ATCCAAGCACTCACCGACGCCATGCAGCCCCTGTTCGTGCCGTGGATGCTCTCGTCTGA
Protein sequenceShow/hide protein sequence
MAILLLLQLQPNFAGRTLHEKPPMVRGTELKLQSLQRVSVPPSGPSGCTFIPGTNGPGCPLKERHYAADRTTRHPSTHRRHAAPVRAVDALV