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Lsi05G016980 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G016980
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionAT-hook motif nuclear-localized protein 20-like
Genome locationchr05:24547833..24548138
RNA-Seq ExpressionLsi05G016980
SyntenyLsi05G016980
Gene Ontology termsNA
InterPro domainsIPR040381 - Uncharacterized protein At4g14450-like


Homology Show/hide homology
GenBank top hitse value%identityAlignment
KAA0049279.1 hypothetical protein E6C27_scaffold171G005190 [Cucumis melo var. makuwa]1.0e-3177.23Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP
        M+DAERK    T   APTRLQSQAPASIEIKR  +WNV IPLLSPLVSPSSCGNSG E+ L MA+N AREE KGL FTK QHPAAPFYYEPVPRA  FVP
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP

Query:  V
        V
Subjt:  V

KAE8650334.1 hypothetical protein Csa_009641 [Cucumis sativus]5.0e-3480.2Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP
        M+DAERK++      APTRLQSQAPASIEIKRA NWNVAIPLLSPLVSPSSCGNS  E+ L MAEN AREE KGL FTK QHPAAPFYYEPVPRA PFVP
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP

Query:  V
        V
Subjt:  V

KAG6582368.1 AT-hook motif nuclear-localized protein 20, partial [Cucurbita argyrosperma subsp. sororia]3.2e-2063.37Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP
        MA +ER+++       PTRLQSQAPASI I RA NWNVAIPLL+PLVS S CGNS Q + LLM ENKAREE      TK QHPA P Y  P+P  TPFVP
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP

Query:  V
        V
Subjt:  V

XP_022924297.1 AT-hook motif nuclear-localized protein 20-like [Cucurbita moschata]2.1e-1965.93Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEP
        MA +ER+++       PTRLQSQAPASI I RA NWNVAIPLL+PLVS S CGNS Q + LLM ENKAREE KGL  TK QHPA PF   P
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEP

XP_023526926.1 AT-hook motif nuclear-localized protein 20-like [Cucurbita pepo subsp. pepo]2.1e-1965.93Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEP
        MA +ER+++       PTRLQSQAPASI I RA NWNVAIPLL+PLVS S CGNS Q + LL AENKAREE KGL  TK QHPA PF   P
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEP

TrEMBL top hitse value%identityAlignment
A0A0A0L8D3 Uncharacterized protein2.4e-3480.2Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP
        M+DAERK++      APTRLQSQAPASIEIKRA NWNVAIPLLSPLVSPSSCGNS  E+ L MAEN AREE KGL FTK QHPAAPFYYEPVPRA PFVP
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP

Query:  V
        V
Subjt:  V

A0A2P5FLQ7 Uncharacterized protein2.5e-1549.52Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAR----EEAKGLAFTKGQHPAAPFYYEPVPRAT
        MAD  R +S    R+ P+RLQ +APAS++I+   +WNVAIPLLSPL SPSS   +    A + +    R    E  K + F K QHPAAPF YEP P   
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAR----EEAKGLAFTKGQHPAAPFYYEPVPRAT

Query:  PFVPV
        PFVPV
Subjt:  PFVPV

A0A5D3D1A6 Uncharacterized protein5.1e-3277.23Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP
        M+DAERK    T   APTRLQSQAPASIEIKR  +WNV IPLLSPLVSPSSCGNSG E+ L MA+N AREE KGL FTK QHPAAPFYYEPVPRA  FVP
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVP

Query:  V
        V
Subjt:  V

A0A6J1CRZ0 uncharacterized protein At4g14450, chloroplastic-like4.9e-1957.14Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEA----KGLAFTKGQHPAAPFYYEPVPRAT
        M DAER+ +  +  Q  TRLQ +AP+SI+I R  +WNVAIPLLSPLVSP       ++  +LM ENKAREEA    K   FT+ +HPAAPFYY PV R T
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEA----KGLAFTKGQHPAAPFYYEPVPRAT

Query:  PFVPV
        PFVPV
Subjt:  PFVPV

A0A6J1E8H9 AT-hook motif nuclear-localized protein 20-like9.9e-2065.93Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEP
        MA +ER+++       PTRLQSQAPASI I RA NWNVAIPLL+PLVS S CGNS Q + LLM ENKAREE KGL  TK QHPA PF   P
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEP

SwissProt top hitse value%identityAlignment
Q6NN02 Uncharacterized protein At4g14450, chloroplastic1.2e-0640Show/hide
Query:  SSAVTQRQAPTRLQSQAPA-SIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKA-----REEAKGLAFTKGQHPAAPFYYEPVPRATPFVPV
        SSA +  +  ++LQ +AP+  I+     NWNVAIPLLSPL    S  +S  +  +   +NK       E  K   F K QHPA+PF YEP     PF+ V
Subjt:  SSAVTQRQAPTRLQSQAPA-SIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKA-----REEAKGLAFTKGQHPAAPFYYEPVPRATPFVPV

Arabidopsis top hitse value%identityAlignment
AT1G04330.1 unknown protein1.7e-0840.2Show/hide
Query:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQ-NWNVAIPLLSPLVSPSSCGNSGQEEALLMAENK--AREEAKGLAFTKGQHPAAPFYYEPVPRAT-
        M+   R  S    R++ +RLQ +AP  ++I   + NW VAIPLLSP  SP       +  A++  E +   +E  K   F K QHPAAPFYY+P P +  
Subjt:  MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQ-NWNVAIPLLSPLVSPSSCGNSGQEEALLMAENK--AREEAKGLAFTKGQHPAAPFYYEPVPRAT-

Query:  PF
        PF
Subjt:  PF

AT3G23170.1 unknown protein3.0e-0843.48Show/hide
Query:  RQAPTRLQSQAPASIEI---KRAQNWNVAIPLLSPL-VSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVPV
        R+ P+RL  + PA   +     A NWN AIPLLSPL +SP S  +   +  +   ++ A    K   F K QHPAAPFYYE      PFVPV
Subjt:  RQAPTRLQSQAPASIEI---KRAQNWNVAIPLLSPL-VSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVPV

AT4G14450.1 unknown protein8.6e-0840Show/hide
Query:  SSAVTQRQAPTRLQSQAPA-SIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKA-----REEAKGLAFTKGQHPAAPFYYEPVPRATPFVPV
        SSA +  +  ++LQ +AP+  I+     NWNVAIPLLSPL    S  +S  +  +   +NK       E  K   F K QHPA+PF YEP     PF+ V
Subjt:  SSAVTQRQAPTRLQSQAPA-SIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKA-----REEAKGLAFTKGQHPAAPFYYEPVPRATPFVPV


Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGCCGATGCAGAGAGAAAAAGCAGCGCCGTTACCCAGAGGCAAGCGCCGACACGGCTGCAGAGCCAGGCTCCGGCATCGATTGAGATAAAGCGGGCGCAGAATTGGAA
CGTGGCTATACCGTTGTTATCCCCTCTTGTGTCACCTTCGTCTTGTGGGAATTCAGGGCAAGAAGAAGCGTTGTTGATGGCTGAGAATAAGGCGAGGGAGGAAGCCAAAG
GGCTAGCCTTTACCAAAGGGCAGCACCCTGCGGCTCCATTTTATTATGAGCCAGTCCCAAGGGCCACACCCTTTGTGCCCGTGTGA
mRNA sequenceShow/hide mRNA sequence
ATGGCCGATGCAGAGAGAAAAAGCAGCGCCGTTACCCAGAGGCAAGCGCCGACACGGCTGCAGAGCCAGGCTCCGGCATCGATTGAGATAAAGCGGGCGCAGAATTGGAA
CGTGGCTATACCGTTGTTATCCCCTCTTGTGTCACCTTCGTCTTGTGGGAATTCAGGGCAAGAAGAAGCGTTGTTGATGGCTGAGAATAAGGCGAGGGAGGAAGCCAAAG
GGCTAGCCTTTACCAAAGGGCAGCACCCTGCGGCTCCATTTTATTATGAGCCAGTCCCAAGGGCCACACCCTTTGTGCCCGTGTGA
Protein sequenceShow/hide protein sequence
MADAERKSSAVTQRQAPTRLQSQAPASIEIKRAQNWNVAIPLLSPLVSPSSCGNSGQEEALLMAENKAREEAKGLAFTKGQHPAAPFYYEPVPRATPFVPV