; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; ; CuGenDBv2

Lsi05G017000 (gene) of Bottle gourd (USVL1VR-Ls) v1 genome

Gene IDLsi05G017000
OrganismLagenaria siceraria USVL1VR-Ls (Bottle gourd (USVL1VR-Ls) v1)
DescriptionUnknown protein
Genome locationchr05:24557542..24564826
RNA-Seq ExpressionLsi05G017000
SyntenyLsi05G017000
Gene Ontology termsNA
InterPro domainsNA


Homology Show/hide homology
GenBank top hitse value%identityAlignment
CBI23584.3 unnamed protein product, partial [Vitis vinifera]3.6e-0833.96Show/hide
Query:  KSKQPRDFRIQALPNLGVGISIPIPLHQLLPKSHRRLHDAVLPVSHEVVRETGTQVQLAHVQHASVAPHEHIVVGKRQEEASGSSMAWEGGYGGRFRATN
        +S+Q   F +   P+L + +++P    QLL ++HR LH A+  V           V+  H  H       H+    +   AS S +A  G      +  +
Subjt:  KSKQPRDFRIQALPNLGVGISIPIPLHQLLPKSHRRLHDAVLPVSHEVVRETGTQVQLAHVQHASVAPHEHIVVGKRQEEASGSSMAWEGGYGGRFRATN

Query:  REEAERIQGRSRPLEKNLPWEVVMRTEPGESLASAFNWDRALRMEFIKDGFSQCSWLPV
         + A   QGRS+PLEKNLPW VVMR EPG S  S+F W   L   F    FS+ SW+ +
Subjt:  REEAERIQGRSRPLEKNLPWEVVMRTEPGESLASAFNWDRALRMEFIKDGFSQCSWLPV
XP_042942924.1 uncharacterized protein LOC122277109 [Carya illinoinensis]2.6e-0656.9Show/hide
Query:  EAAVWAQGRSKPLEKKRPWEVVRRTEPRVAWDLTWARRERKEEMKFGPIQCSLSPVRV
        + A WAQ RS PLEK  PW V+ R E R AWDLTW R E + EM  G  +CS SPV V
Subjt:  EAAVWAQGRSKPLEKKRPWEVVRRTEPRVAWDLTWARRERKEEMKFGPIQCSLSPVRV
TrEMBL top hitse value%identityAlignment
A0A0A0L773 Uncharacterized protein4.0e-2983.54Show/hide
Query:  EEAERIQGRSRPLEKNLPWEVVMRTEPGESLASAFNWDRALRMEFIKDGFSQCSWLPVRVSMNNFPRFSTLHIFRTKLS
        EEAERI GRSRPLEKNLPW+VV+RTEPGE+LASA  WDRAL MEFIKDGFSQCSWLPV V MN+FPRFS LHIF  KLS
Subjt:  EEAERIQGRSRPLEKNLPWEVVMRTEPGESLASAFNWDRALRMEFIKDGFSQCSWLPVRVSMNNFPRFSTLHIFRTKLS
SwissProt top hitse value%identityAlignment
No hits found
Arabidopsis top hitse value%identityAlignment
No hits found

Sequences Show/hide sequences
CDS sequenceShow/hide CDS sequence
ATGGGAATGATGAGAACGGAGCCACGGGAGGCTTGGGATTTGACTTTGGAAAGAGCCTCGAGGATGGAGGCGATGAAGGAGGGGCTGAGGCGGTGGTCGTCGTCGCCGGT
CAGAGTTAGGATGAAAAGATTGCGTCGCTTCTCGAGTGTGCACATTTTCGGAGTGTTGCGTTCAACCAATTATCAGATTCCTTTATTTATTTATCTTCAAATGGAAATAC
TTAGAAATTGTTATGACCTTCGGGGTAAATCCAAGCAACCCAGAGATTTCAGGATACAAGCTCTTCCTAATCTCGGCGTAGGCATCTCCATCCCAATTCCTCTCCACCAG
CTCCTCCCCAAGTCGCACCGCCGCCTCCATGACGCCGTCCTCCCCGTGAGCCATGAAGTAGTCCGGGAGACTGGCACCCAAGTCCAGCTCGCTCATGTACAACACGCCTC
GGTCGCTCCTCATGAGCATATAGTCGTGGGAAAGCGCCAAGAGGAGGCCAGCGGCAGCAGCATGGCCTGGGAGGGCGGCTACGGTGGGCGGTTTCGGGCGACGAATAGGG
AGGAAGCGGAGAGAATCCAGGGAAGATCGAGGCCGTTGGAGAAGAATTTGCCTTGGGAAGTTGTGATGAGAACAGAGCCAGGGGAGTCTCTGGCTTCGGCCTTCAATTGG
GACAGAGCTTTGAGGATGGAGTTTATTAAGGATGGGTTCAGCCAGTGCTCGTGGTTGCCGGTTAGAGTTAGTATGAACAACTTCCCACGCTTCTCAACGCTGCACATTTT
CAGAACGAAGCTAAGCCAATTGATGAAAACAGAGTCCAAAATTATTGATTATACTTTGCAACAGGATCAACCAAAATACTCGCACACGACAAACAAATCCACCAAAATGA
CACCTAACTTCTCCCCCATCGTCACCGCTGCCTCCATCAACGCCTCCTCACCGTCATGCACCGCGTCAGCAATTCCCAACTTCACCGCTGTTTCACTATTGACCTTCATC
CCCACCAGCAGCATGTCTCGCTGGACCGAAGCTGAACCGATCTTTGACCTCATCAACGCCGCAAAAGTAGATGAATTGCTTGTGAAGTTAACAAACCTCGCTCATGTAGA
GGACGCCTTTATCGCGCCTCATGAGGACGTAATCGTGGCAGAGGGCGAGAGCGAAACCAGCGGCGATGGTGGGCATGGGGAGAGAGAGAAGGGCGGCAACGATTGGCTTG
AAGATGTGGACCATGTGGACTATATGCGGTCTCTAGCGGCGGATTTGGAGGCGGCGGTTTGGGCCCAGGGAAGGTCGAAGCCGTTGGAGAAGAAACGGCCATGGGAAGTG
GTGAGAAGGACTGAACCGCGAGTGGCTTGGGACTTGACTTGGGCGAGAAGAGAAAGGAAGGAGGAAATGAAATTTGGACCGATCCAGTGCTCGTTGTCGCCGGTGAGGGT
GATGATGAACAGACTGCCACGCTTCTCTAGACTGCACATGTCGTCGTCCTCGTTTGAACCAAATTGA
mRNA sequenceShow/hide mRNA sequence
ATGGGAATGATGAGAACGGAGCCACGGGAGGCTTGGGATTTGACTTTGGAAAGAGCCTCGAGGATGGAGGCGATGAAGGAGGGGCTGAGGCGGTGGTCGTCGTCGCCGGT
CAGAGTTAGGATGAAAAGATTGCGTCGCTTCTCGAGTGTGCACATTTTCGGAGTGTTGCGTTCAACCAATTATCAGATTCCTTTATTTATTTATCTTCAAATGGAAATAC
TTAGAAATTGTTATGACCTTCGGGGTAAATCCAAGCAACCCAGAGATTTCAGGATACAAGCTCTTCCTAATCTCGGCGTAGGCATCTCCATCCCAATTCCTCTCCACCAG
CTCCTCCCCAAGTCGCACCGCCGCCTCCATGACGCCGTCCTCCCCGTGAGCCATGAAGTAGTCCGGGAGACTGGCACCCAAGTCCAGCTCGCTCATGTACAACACGCCTC
GGTCGCTCCTCATGAGCATATAGTCGTGGGAAAGCGCCAAGAGGAGGCCAGCGGCAGCAGCATGGCCTGGGAGGGCGGCTACGGTGGGCGGTTTCGGGCGACGAATAGGG
AGGAAGCGGAGAGAATCCAGGGAAGATCGAGGCCGTTGGAGAAGAATTTGCCTTGGGAAGTTGTGATGAGAACAGAGCCAGGGGAGTCTCTGGCTTCGGCCTTCAATTGG
GACAGAGCTTTGAGGATGGAGTTTATTAAGGATGGGTTCAGCCAGTGCTCGTGGTTGCCGGTTAGAGTTAGTATGAACAACTTCCCACGCTTCTCAACGCTGCACATTTT
CAGAACGAAGCTAAGCCAATTGATGAAAACAGAGTCCAAAATTATTGATTATACTTTGCAACAGGATCAACCAAAATACTCGCACACGACAAACAAATCCACCAAAATGA
CACCTAACTTCTCCCCCATCGTCACCGCTGCCTCCATCAACGCCTCCTCACCGTCATGCACCGCGTCAGCAATTCCCAACTTCACCGCTGTTTCACTATTGACCTTCATC
CCCACCAGCAGCATGTCTCGCTGGACCGAAGCTGAACCGATCTTTGACCTCATCAACGCCGCAAAAGTAGATGAATTGCTTGTGAAGTTAACAAACCTCGCTCATGTAGA
GGACGCCTTTATCGCGCCTCATGAGGACGTAATCGTGGCAGAGGGCGAGAGCGAAACCAGCGGCGATGGTGGGCATGGGGAGAGAGAGAAGGGCGGCAACGATTGGCTTG
AAGATGTGGACCATGTGGACTATATGCGGTCTCTAGCGGCGGATTTGGAGGCGGCGGTTTGGGCCCAGGGAAGGTCGAAGCCGTTGGAGAAGAAACGGCCATGGGAAGTG
GTGAGAAGGACTGAACCGCGAGTGGCTTGGGACTTGACTTGGGCGAGAAGAGAAAGGAAGGAGGAAATGAAATTTGGACCGATCCAGTGCTCGTTGTCGCCGGTGAGGGT
GATGATGAACAGACTGCCACGCTTCTCTAGACTGCACATGTCGTCGTCCTCGTTTGAACCAAATTGA
Protein sequenceShow/hide protein sequence
MGMMRTEPREAWDLTLERASRMEAMKEGLRRWSSSPVRVRMKRLRRFSSVHIFGVLRSTNYQIPLFIYLQMEILRNCYDLRGKSKQPRDFRIQALPNLGVGISIPIPLHQ
LLPKSHRRLHDAVLPVSHEVVRETGTQVQLAHVQHASVAPHEHIVVGKRQEEASGSSMAWEGGYGGRFRATNREEAERIQGRSRPLEKNLPWEVVMRTEPGESLASAFNW
DRALRMEFIKDGFSQCSWLPVRVSMNNFPRFSTLHIFRTKLSQLMKTESKIIDYTLQQDQPKYSHTTNKSTKMTPNFSPIVTAASINASSPSCTASAIPNFTAVSLLTFI
PTSSMSRWTEAEPIFDLINAAKVDELLVKLTNLAHVEDAFIAPHEDVIVAEGESETSGDGGHGEREKGGNDWLEDVDHVDYMRSLAADLEAAVWAQGRSKPLEKKRPWEV
VRRTEPRVAWDLTWARRERKEEMKFGPIQCSLSPVRVMMNRLPRFSRLHMSSSSFEPN